def run(self):
from xmipp import MetaData, str2Label
from protlib_gui_figure import XmippPlotter
md = MetaData(self.getParam('-i'))
if self.checkParam('--xlabel'):
xlabel = self.getParam('--xlabel')
mdLabelX = str2Label(xlabel)
else:
xlabel = ""
mdLabelX = None
if self.checkParam('--xtitle'):
xlabel = self.getParam('--xtitle')
ylabels = self.getParam('--ylabel').split()
if self.checkParam('--ytitle'):
ylabel = self.getParam('--ytitle')
else:
ylabel = ylabels[0]
colors, lenColors = self.getList('--colors',
['g', 'b', 'r', 'y', 'c', 'm', 'k'])
markers, lenMarkers = self.getList('--markers')
styles, lenStyles = self.getList('--style')
if self.checkParam('--nbins'):
nBins = self.getIntParam('--nbins')
else:
nBins = None
title = self.getParam('--title')
xplotter = XmippPlotter()
xplotter.createSubPlot(title, xlabel, ylabel)
for i, l in enumerate(ylabels):
c = colors[i % lenColors]
m = markers[i % lenMarkers]
if m == "none":
m = None
s = styles[i % lenStyles]
if s == "none":
s = None
xplotter.plotMd(md,
mdLabelX,
str2Label(l),
color=c,
marker=m,
linestyle=s,
nbins=nBins) # if nbins is present do an histogram
legendLocation = self.getParam('--legend')
if legendLocation != 'none':
xplotter.showLegend(ylabels, loc=legendLocation.replace('_', ' '))
xplotter.show()
