stableSetAdaptator = TableBinSetAdaptator( db, stable )
else:
print "ERROR: unknown subject table type: %s" % ( stype )
sys.exit(1)
lSetIdToRemovePaths = []
count = 0
# for each path ID
for id in lPathId:
string = "processing path '%i'..." % ( id )
if qtype == "path":
lPaths = qtablePathAdaptator.getPathListFromId( id )
lQuerySets = PathUtils.getSetListFromQueries( lPaths )
elif qtype == "set":
lQuerySets = qtableSetAdaptator.getSetListFromId( id )
lQuerySets.sort()
qmin, qmax = SetUtils.getListBoundaries( lQuerySets )
qmin = qmin - 1
qmax = qmax + 1
if stype == "path":
lPaths = stablePathAdaptator.getPathListOverlappingQueryCoord( lQuerySets[0].seqname.split()[0], qmin, qmax )
lSubjectSets = PathUtils.getSetListFromQueries( lPaths )
elif stype == "set":
lSubjectSets = stableSetAdaptator.getSetListFromQueryCoord( lQuerySets[0].seqname.split()[0], qmin, qmax )
