def test_peak_hop_save(self):
self.measure(baseline=False)
msi = MassSpecDatabaseImporter()
msi.connect()
arun = self.arun
arun.massspec_importer = msi
ret = arun.post_measurement_save()
self.assertTrue(ret)
def test_multicollect_save(self):
self.measure()
msi = MassSpecDatabaseImporter()
msi.connect()
arun = self.arun
arun.massspec_importer = msi
ret = arun.post_measurement_save()
self.assertTrue(ret)
def test_peak_hop_save(self):
self.measure(baseline=False)
msi = MassSpecDatabaseImporter()
msi.connect()
arun = self.arun
arun.massspec_importer = msi
ret = arun.post_measurement_save()
self.assertTrue(ret)
def __init__(self, *args, **kw):
'''
destination: dict.
dict, required keys are (username, password, host, name)
'''
super(MassSpecExporter, self).__init__(*args, **kw)
importer = MassSpecDatabaseImporter()
self.importer = importer
def bind_preferences(self):
# massspec
prefid = 'pychron.massspec.database'
bind_preference(self, 'massspec_enabled', '{}.enabled'.format(prefid))
if self.massspec_enabled:
from pychron.experiment.utilities.mass_spec_database_importer import MassSpecDatabaseImporter
store = MassSpecDatabaseImporter()
bind_preference(store.db, 'name', '{}.name'.format(prefid))
bind_preference(store.db, 'host', '{}.host'.format(prefid))
bind_preference(store.db, 'username', '{}.username'.format(prefid))
bind_preference(store.db, 'password', '{}.password'.format(prefid))
prefid = 'pychron.massspec.config'
bind_preference(store, 'reference_detector_name',
'{}.reference_detector_name'.format(prefid))
bind_preference(store, 'reference_isotope_name',
'{}.reference_isotope_name'.format(prefid))
bind_preference(
store, 'use_reference_detector_by_isotope',
'{}.use_reference_detector_by_isotope'.format(prefid))
self.stores['massspec'] = store
# isotopedb
prefid = 'pychron.pychron.database'
bind_preference(self, 'isotopedb_enabled', '{}.enabled'.format(prefid))
if self.isotopedb_enabled:
from pychron.database.isotope_database_manager import IsotopeDatabaseManager
store = IsotopeDatabaseManager()
bind_preference(store.db, 'name', '{}.name'.format(prefid))
bind_preference(store.db, 'host', '{}.host'.format(prefid))
bind_preference(store.db, 'username', '{}.username'.format(prefid))
bind_preference(store.db, 'password', '{}.password'.format(prefid))
self.stores['isotopedb'] = store
self.stores['dvc'] = self.mainstore
