from pycromanager import Acquisition, multi_d_acquisition_events
import numpy as np
if __name__ == "__main__":
# this hook function can control the micro-manager core
def img_process_fn(image, metadata, bridge, event_queue):
if not hasattr(img_process_fn, "counter"):
img_process_fn.counter = 0
if img_process_fn.counter < 10:
evt = {"axes": {"time": 0, "n": img_process_fn.counter}}
img_process_fn.counter += 1
image[250:350, 100:300] = img_process_fn.counter * 10
else:
evt = None
event_queue.put(evt)
return image, metadata
acq = Acquisition(
directory="/Users/henrypinkard/megllandump",
name="acquisition_name",
image_process_fn=img_process_fn,
)
# kick it off with a single event
acq.acquire({"axes": {"time": 0}})
#this hook function can control the micro-manager core
def img_process_fn(image, metadata, bridge, event_queue):
if not hasattr(img_process_fn, 'counter'):
img_process_fn.counter = 0
if img_process_fn.counter < 10:
evt = {
'axes': {'time': 0, 'n': img_process_fn.counter}
}
img_process_fn.counter += 1
image[250:350, 100:300] = img_process_fn.counter * 10
else:
evt = None
event_queue.put(evt)
return image, metadata
acq = Acquisition(directory='/Users/henrypinkard/megllandump', name='acquisition_name',
image_process_fn=img_process_fn)
#kick it off with a single event
acq.acquire({'axes': {'time': 0}})