def _do(self):
# initial a figure with a single plot
self.init_figure()
# equal axis length and no ticks
equal_axis(self.ax)
no_ticks(self.ax)
# determine the overall scale of points
_F = np.row_stack([e[0] for e in self.to_plot])
_min, _max = _F.min(axis=0), _F.max(axis=0)
V = get_uniform_points_around_circle(self.n_dim)
plot_axes_arrow(self.ax, V, extend_factor=self.axis_extension, **{**self.axis_style, **self.arrow_style})
plot_axis_labels(self.ax, V, self.get_labels(), **self.axis_label_style)
# normalize in range for this plot - here no implicit normalization as in radviz
bounds = parse_bounds(self.bounds, self.n_dim)
to_plot_norm = normalize(self.to_plot, bounds)
for k, (F, kwargs) in enumerate(to_plot_norm):
N = (F[..., None] * V).sum(axis=1)
self.ax.scatter(N[:, 0], N[:, 1], **kwargs)
def _do(self):
if self.bounds is None:
raise Exception("The boundaries must be provided.")
_F = np.row_stack([e[0] for e in self.to_plot])
if np.any(_F < self.bounds[0]) or np.any(_F > self.bounds[1]):
raise Exception(
"Points out of the boundaries exist! Please make sure the boundaries are indeed boundaries.")
n_rows = len(self.to_plot)
n_cols = max([len(e[0]) for e in self.to_plot])
self.init_figure(n_rows=n_rows, n_cols=n_cols, force_axes_as_matrix=True)
# normalize the input
bounds = parse_bounds(self.bounds, self.n_dim)
to_plot_norm = normalize(self.to_plot, bounds, reverse=self.reverse)
# get the endpoints of circle
V = get_circle_points(self.n_dim)
if self.normalize_each_objective:
inner = np.zeros((self.n_dim, 1)) * V
outer = np.ones((self.n_dim, 1)) * V
else:
inner = bounds[[0]].T * V
outer = (bounds[[1]].T * V) / bounds[1].max()
for k, (F, kwargs) in enumerate(to_plot_norm):
for j, _F in enumerate(F):
self._plot(self.ax[k, j], _F, inner, outer, kwargs)
def _do(self):
# initial a figure with a single plot
self.init_figure()
# if no normalization of each axis the bounds are based on the overall min and max
if not self.normalize_each_axis and self.bounds is None:
_F = np.row_stack([e[0] for e in self.to_plot])
self.bounds = [_F.min(), _F.max()]
# normalize the input
bounds = parse_bounds(self.bounds, self.n_dim)
to_plot_norm, bounds = normalize(self.to_plot,
bounds,
return_bounds=True)
# plot for each set the lines
for k, (F, kwargs) in enumerate(to_plot_norm):
_kwargs = kwargs.copy()
set_if_none(_kwargs, "color", self.colors[k])
for i in range(len(F)):
plt.plot(np.arange(F.shape[1]), F[i, :], **_kwargs)
# Plot the parallel coordinate axes
for i in range(self.n_dim):
self.ax.axvline(i, **self.axis_style)
bottom, top = -0.1, 1.075
margin_left = 0.08
if self.show_bounds:
self.ax.text(i - margin_left, bottom,
self.func_number_to_text(bounds[0][i]))
self.ax.text(i - margin_left, top,
self.func_number_to_text(bounds[1][i]))
if self.n_ticks is not None:
n_length = 0.03
for y in np.linspace(0, 1, self.n_ticks):
self.ax.hlines(y, i - n_length, i + n_length,
**self.axis_style)
# if bounds are shown, then move them to the bottom
if self.show_bounds:
self.ax.tick_params(axis='x', which='major', pad=25)
self.ax.spines['right'].set_visible(False)
self.ax.spines['left'].set_visible(False)
self.ax.set_yticklabels([])
self.ax.set_yticks([])
self.ax.set_ylim((-0.05, 1.05))
self.ax.set_xticks(np.arange(self.n_dim))
self.ax.set_xticklabels(self.get_labels())
return self
def _do(self):
n_rows = len(self.to_plot)
n_cols = max([len(e[0]) for e in self.to_plot])
self.init_figure(n_rows=n_rows,
n_cols=n_cols,
force_axes_as_matrix=True)
# normalize the input
bounds = parse_bounds(self.bounds, self.n_dim)
to_plot_norm = normalize(self.to_plot, bounds, reverse=self.reverse)
for k, (F, kwargs) in enumerate(to_plot_norm):
for j, _F in enumerate(F):
self._plot(self.ax[k, j], _F)
def _do(self):
if len(self.to_plot) != 1:
raise Exception("Only one element can be added to a heatmap.")
# initial a figure with a single plot
self.init_figure()
# normalize the input
bounds = parse_bounds(self.bounds, self.n_dim)
to_plot_norm = normalize(self.to_plot, bounds, reverse=self.reverse)
(F, kwargs) = to_plot_norm[0]
# dot the sorting if required
if self.order_by_objectives is not None and self.order_by_objectives is not False:
if isinstance(self.order_by_objectives, list) and len(
self.order_by_objectives) == self.n_dim:
L = self.order_by_objectives
elif isinstance(self.order_by_objectives, int):
L = [
i for i in range(F.shape[1])
if i != self.order_by_objectives
]
L.insert(0, self.order_by_objectives)
else:
L = range(self.n_dim)
_F = [F[:, j] for j in L]
I = np.lexsort(_F[::-1])
else:
I = np.arange(len(F))
# plot the data
self.ax.imshow(F[I], cmap=self.cmap, **self.axis_style)
# set the x ticks and labels
self.ax.set_xticks(np.arange(self.n_dim))
self.ax.set_xticklabels(self.get_labels())
# no solution labels should be used
if self.solution_labels is None:
pass
# in case just true just use a number for each solution
elif isinstance(self.solution_labels, bool) and self.solution_labels:
self.solution_labels = np.arange(len(F)) + 1
# otherwise use directly the label provided
else:
if len(self.solution_labels) != len(F):
raise Exception(
"The labels provided for each solution must be equal to the number of solutions being plotted."
)
if self.solution_labels is None:
self.ax.set_yticks([])
self.ax.set_yticklabels([])
else:
# for ordered by objective apply it to labels
self.solution_labels = [self.solution_labels[i] for i in I]
self.ax.set_yticks(np.arange(len(F)))
self.ax.set_yticklabels(self.solution_labels)
