def run_fileformats_io(self):
p = pyopenms.FileHandler()
e = pyopenms.MSExperiment()
p.loadExperiment(self.testfile, e)
show_mem("after load mzXML")
ct = pyopenms.ChromatogramTools()
ct.convertChromatogramsToSpectra(e)
p.storeExperiment(self.testfile, e)
show_mem("after store mzXML")
p.loadExperiment(self.testfile, e)
show_mem("after load mzXML")
p = pyopenms.FileHandler()
ct.convertSpectraToChromatograms(e, True)
p.storeExperiment("../test.mzML".encode(), e)
show_mem("after store mzML")
p.loadExperiment("../test.mzML".encode(), e)
show_mem("after load mzML")
p = pyopenms.FileHandler()
ct.convertChromatogramsToSpectra(e)
p.storeExperiment("../test.mzData".encode(), e)
show_mem("after store mzData")
p.loadExperiment("../test.mzData".encode(), e)
show_mem("after load mzData")
del e
del p
del ct
def testChromatogramToosl():
"""
@tests:
ChromatogramTools.__init__
ChromatogramTools.convertChromatogramsToSpectra
ChromatogramTools.convertSpectraToChromatograms
"""
pyopenms.ChromatogramTools()
pyopenms.ChromatogramTools.convertChromatogramsToSpectra
pyopenms.ChromatogramTools.convertSpectraToChromatograms