def test_trace_edges():
# Define the output directories (HARDCODED!!)
setupdir = os.path.join(os.getcwd(), 'setup_files')
outdir = os.path.join(os.getcwd(), 'shane_kast_blue_A')
# Remove them if they already exist
if os.path.isdir(setupdir):
shutil.rmtree(setupdir)
if os.path.isdir(outdir):
shutil.rmtree(outdir)
# Perform the setup
droot = os.path.join(os.environ['PYPEIT_DEV'], 'RAW_DATA/shane_kast_blue/600_4310_d55')
droot += '/'
setup.main(setup.parser(['-r', droot, '-s', 'shane_kast_blue', '-c', 'all']))
# Define the pypeit file (HARDCODED!!)
pypeit_file = os.path.join(outdir, 'shane_kast_blue_A.pypeit')
# Run the tracing
trace_edges.main(trace_edges.parser(['-f', pypeit_file]))
# Define the edges master file (HARDCODED!!)
trace_file = os.path.join(outdir, 'Masters', 'MasterEdges_A_1_01.fits.gz')
# Check that the correct number of traces were found
edges = edgetrace.EdgeTraceSet.from_file(trace_file)
assert edges.ntrace == 2, 'Did not find the expected number of traces.'
# Clean up
shutil.rmtree(setupdir)
shutil.rmtree(outdir)
def test_trace_add_rm():
# Define the output directories (HARDCODED!!)
setupdir = os.path.join(os.getcwd(), 'setup_files')
outdir = os.path.join(os.getcwd(), 'shane_kast_blue_A')
masterdir = os.path.join(os.getcwd(), 'shane_kast_blue_A', 'Masters')
# Remove them if they already exist
if os.path.isdir(setupdir):
shutil.rmtree(setupdir)
if os.path.isdir(outdir):
shutil.rmtree(outdir)
droot = os.path.join(os.environ['PYPEIT_DEV'],
'RAW_DATA/shane_kast_blue/600_4310_d55')
# Run the setup
ps = PypeItSetup.from_file_root(droot,
'shane_kast_blue',
output_path=setupdir)
ps.run(setup_only=True, sort_dir=setupdir)
# Add lines to remove and add slits. This removes the one slit that
# is found and adds another.
ps.user_cfg += [
'[calibrations]', '[[slitedges]]', 'rm_slits = 1:1028:170',
'add_slits = 1:1028:30:300'
]
# Use PypeItMetaData to write the complete PypeIt file
pypeit_file = ps.fitstbl.write_pypeit(output_path=os.getcwd(),
cfg_lines=ps.user_cfg,
configs=['all'])[0]
# Run the tracing
trace_edges.main(trace_edges.parse_args(['-f', pypeit_file]))
# Define the edges master file (HARDCODED!!)
trace_file = os.path.join(outdir, 'Masters', 'MasterEdges_A_1_01.fits.gz')
# Check that the correct number of traces were found
edges = edgetrace.EdgeTraceSet.from_file(trace_file)
assert edges.ntrace == 2, 'Did not find the expected number of traces.'
# Clean up
shutil.rmtree(setupdir)
shutil.rmtree(outdir)
