def make_plot(self, multiple=False):
"""
draws the plots
"""
# legend setup
if self.LegendCB.isChecked():
legend = 'Replicate ' if self.alldata.is_single() else 'Set '
else:
legend = ''
self.multi_cach = multiple
self.fig.clear()
self.axes = self.fig.add_subplot(121)
self.axes2 = self.fig.add_subplot(122)
a_isvar = False if self.SetCB.currentIndex() == 1 else True
if self.alldata.is_single():
# reaction plot
reaction_plots.plot_singlegraph(self.data, self.axes, signal=self.PlotCB.currentIndex(),
equation=self.equation, legend=legend)
# residuals plot
reaction_plots.plot_res(self.alldata, self.axes2, equation=self.equation, a_isvar=a_isvar)
# plot for DS data
else:
ebars = True if self.ErrCB.currentIndex() == 1 else False
# plot when finding fits
if multiple:
reaction_plots.plot_dsegraph(self.alldata, self.axes, signal=self.PlotCB.currentIndex(),
equations=[eq.function for eq in self.set_equations],
a_isvar=a_isvar, legend=legend, pick=self.EncCB.currentIndex() - 1,
errors=ebars)
reaction_plots.plot_res(self.alldata, self.axes2, equations=[eq.function for eq in self.set_equations],
a_isvar=a_isvar, pick=self.EncCB.currentIndex() - 1)
# plot when adusting values
else:
reaction_plots.plot_dsegraph(self.alldata, self.axes, signal=self.PlotCB.currentIndex(),
equation=self.equation, a_isvar=a_isvar, legend=legend,
pick=self.EncCB.currentIndex() - 1, errors=ebars)
reaction_plots.plot_res(self.alldata, self.axes2, equation=self.equation, a_isvar=a_isvar,
pick=self.EncCB.currentIndex() - 1)
self.canvas.draw()
def plot_basicgraphs2(self):
"""
Plotting for two substrates examples!
"""
self.Graph1Sel.show()
self.fig.clear()
repfit1 = 1 if self.RepLin1.isChecked() else 2 if self.RepParab1.isChecked() else 0
repfit2 = 1 if self.RepLin2.isChecked() else 2 if self.RepParab2.isChecked() else 0
globfit1 = 1 if self.GlobLin1.isChecked() else 2 if self.GlobParab1.isChecked() else 0
globfit2 = 1 if self.GlobLin2.isChecked() else 2 if self.GlobParab2.isChecked() else 0
self.axes = self.fig.add_subplot(121)
self.axes2 = self.fig.add_subplot(122)
reaction_plots.plot_singlegraph(
self.reaction_data.get_repres(True),
self.axes,
self.Graph1Sel.currentIndex(),
legend="Set " if self.Leg1Box.isChecked() else "",
rep_fit=repfit1,
global_fit=globfit1,
sname=self.reaction_data.nameA,
extrapolation=self.Extrap1.value(),
)
reaction_plots.plot_singlegraph(
self.reaction_data.get_repres(False),
self.axes2,
self.Graph1Sel.currentIndex(),
legend="Set " if self.Leg1Box.isChecked() else "",
rep_fit=repfit2,
global_fit=globfit2,
sname=self.reaction_data.nameB,
extrapolation=self.Extrap2.value(),
)
# Draw the plots
self.canvas.draw()
self.canvas.show()
self.mpl_toolbar.show()
def plot_basicgraphs(self):
"""
Plots the graphs to be displayed in main window.
"""
self.fig.clear()
self.axes = self.fig.add_subplot(121)
self.axes2 = self.fig.add_subplot(122)
repfit1 = 1 if self.RepLin1.isChecked() else 2 if self.RepParab1.isChecked() else 0
repfit2 = 1 if self.RepLin2.isChecked() else 2 if self.RepParab2.isChecked() else 0
globfit1 = 1 if self.GlobLin1.isChecked() else 2 if self.GlobParab1.isChecked() else 0
globfit2 = 1 if self.GlobLin2.isChecked() else 2 if self.GlobParab2.isChecked() else 0
reaction_plots.plot_singlegraph(
self.reaction_data,
self.axes,
self.Graph1Sel.currentIndex(),
legend="Replicate " if self.Leg1Box.isChecked() else "",
rep_fit=repfit1,
global_fit=globfit1,
extrapolation=self.Extrap1.value(),
)
reaction_plots.plot_singlegraph(
self.reaction_data,
self.axes2,
self.Graph2Sel.currentIndex(),
legend="Replicate " if self.Leg2Box.isChecked() else "",
rep_fit=repfit2,
global_fit=globfit2,
extrapolation=self.Extrap2.value(),
)
# New options
self.Graph1Sel.show()
self.Graph2Sel.show()
# Draw the plots
self.canvas.draw()
self.canvas.show()
self.mpl_toolbar.show()
def draw_plots(self):
"""
Draw or re-draw plots
"""
self.fig.clear()
if self.reac_data.is_single():
self.axes = self.fig.add_subplot(111)
# Graph plot
reaction_plots.plot_singlegraph(self.reac_data, self.axes, 0, pick=self.RepBox.currentIndex())
self.canvas.draw()
self.canvas.show()
else:
self.axes = self.fig.add_subplot(121)
self.axes2 = self.fig.add_subplot(122)
picks = self.select_rep()
reaction_plots.plot_singlegraph(self.reac_data.get_repres(True), self.axes, 0, pick=picks[0], alpha1=0.75)
reaction_plots.plot_singlegraph(self.reac_data.get_repres(False), self.axes2, 0, pick=picks[1], alpha1=0.75)
# enhance single point
sub_group = True if self.VarBox.currentIndex() == 0 else False
plot_obj = self.axes if sub_group else self.axes2
dat_set = self.SetBox.currentIndex()
dat_rep = self.RepBox.currentIndex()
# plot if possible
try:
plot_obj.plot(self.reac_data.AllVar[sub_group][dat_set][dat_rep],
self.reac_data.AllRates[sub_group][dat_set][dat_rep], 'o', color='red')
except IndexError:
pass
self.canvas.draw()
self.canvas.show()
