def build_payload(url, params, type, **kwargs):
"""Build response payload for a request,
pass parameters and optional parameters
send external parameters for mapping and validation
parse json like string
return json object
:type url: string
:param url: request url
:type params: string
:param params: request parameters
:type kwargs: string
:param kwargs: optional request parameters
:rtype: response json
:return: Returns actual response payload from the webservice in the json format if success raises exception otherwise
"""
# build request parameters, set defaults, map external parameters
transformed_params = rb.build_param_map(params, type)
log.debug("Transformed_params: {0}".format(transformed_params))
# execute a request by passing completely mapped and validated request parameters
response = requests.get(url, params=transformed_params)
log.debug("Response Text:")
log.debug(response.text)
# Raise exception and abort if requests is not successful
response.raise_for_status()
# convert received response (json like string) in a valid json object
parsed_response = json.loads(response.text)
return parsed_response
def loadMetabolites(url, params, type, **kwargs):
"""Build response payload for a request,
pass parameters and optional parameters
send external parameters for mapping and validation
parse json like string
return json object
:type url: string
:param url: request url
:type params: string
:param params: request parameters
:type kwargs: string
:param kwargs: optional request parameters
:rtype: response json
:return: Returns actual response payload: list of all metabolites for a given experiment ID, and platform ID from the webservice in the json format if success raises exception otherwise
"""
# build request parameters, set defaults, map external parameters
transformed_params = rb.build_param_map(params, type)
log.debug("Transformed_params: {0}".format(transformed_params))
# execute a request by passing completely mapped and validated request parameters
response = requests.get(url, params=transformed_params)
log.debug("Response Text:")
log.debug(response.text)
# Raise exception and abort if requests is not successful
response.raise_for_status()
metabolites = json.loads(response.text, object_hook=lambda x: ml.Metabolite(**x))
return metabolites
def main():
"""test logic for when running this module as the primary one!"""
## pass the namespace you test again (your dev namespace or production namespace)
test_namespace = 'ibelyaev-dev'
#search test case
args = {'experimentID': '106', 'platformID':'84', 'metaboliteID':'4349', '_url': 'https://api.araport.org/community/v0.3', '_namespace': test_namespace}
driver.search(args)
param_map = rb.build_param_map(args, 'search')
log.info("Param Map:")
log.info(param_map)
# list test case
args = {'experimentID': '106', 'platformID':'84', '_url': 'https://api.araport.org/community/v0.3', '_namespace': test_namespace}
driver.list(args)
param_map = rb.build_param_map(args, 'list')
log.info("Param Map:")
log.info(param_map)
def loadPlatforms(url, params, request_type, **kwargs):
"""Build response payload for a request,
pass parameters and optional parameters
send external parameters for mapping and validation
parse json like string
return json object
:type url: string
:param url: request url
:type params: string
:param params: request parameters
:type kwargs: string
:param kwargs: optional request parameters
:rtype: response json
:return: Returns actual response payload: list of all platforms for a given experiment ID from the webservice in the json format if success raises exception otherwise
"""
# build request parameters, set defaults, map external parameters
transformed_params = rb.build_param_map(params, request_type)
log.debug("Transformed_params: {0}".format(transformed_params))
# execute a request by passing completely mapped and validated request parameters
response = requests.get(url, params=transformed_params)
log.debug("Response Text:")
log.debug(response.text)
# Raise exception and abort if requests is not successful
response.raise_for_status()
try:
platforms = json.loads(response.text, object_hook=lambda x: pl.Platform(**x))
except Exception as e:
error_msg = "There are no information of experiments for a experimentID submitted!"
raise exception.NotFound(error_msg)
return platforms