def test_get_effective_rate_3_to_2(self):
"""
Tests that the effective rate is limited for a 3 -> 2 reaction
"""
effective_rate = diffusion_limiter.get_effective_rate(self.tri_bi_reaction, self.T)
self.assertTrue(effective_rate < self.intrinsic_rates[self.tri_bi_reaction])
self.assertTrue(effective_rate >= 0.2 * self.intrinsic_rates[self.tri_bi_reaction])
def test_get_effective_rate_unimolecular(self):
"""
Tests that the effective rate is the same as the intrinsic rate for
unimiolecular reactions.
"""
effective_rate = diffusion_limiter.get_effective_rate(self.uni_reaction, self.T)
self.assertEqual(effective_rate, self.intrinsic_rates[self.uni_reaction])
def test_get_effective_rate_2_to_1(self):
"""
Tests that the effective rate is limited in the forward direction for
a 2 -> 1 reaction
"""
effective_rate = diffusion_limiter.get_effective_rate(self.bi_uni_reaction, self.T)
self.assertTrue(effective_rate < self.intrinsic_rates[self.bi_uni_reaction])
self.assertTrue(effective_rate >= 0.2 * self.intrinsic_rates[self.bi_uni_reaction])