#args.dryFitsFiles='YOUR/HOME/rts-2/scripts/rts2saf/samples'
#
if args.verbose:
args.debug=True
args.level='DEBUG'
args.toconsole=True
if args.checkConfig:
args.toconsole=True
# logger
logger= Logger(debug=args.debug, args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt=Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error('rts2saf_focus: exiting, check the configuration file: {0}'.format(args.config))
sys.exit(1)
# overwrite config defaults
rt.cfg['ANALYZE_FLUX'] = args.flux
rt.cfg['ANALYZE_ASSOC'] = args.associate
rt.cfg['ANALYZE_ASSOC_FRACTION'] = args.fractObjs
if args.FitDisplay:
rt.cfg['WITH_MATHPLOTLIB'] = True
# get the environment
args.debug = True
args.level = 'DEBUG'
args.toconsole = True
if args.checkConfig:
args.toconsole = True
# logger
logger = Logger(
debug=args.debug,
args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt = Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error(
'rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'
.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error(
'rts2saf_focus: exiting, check the configuration file: {0}'.format(
args.config))
sys.exit(1)
# overwrite config defaults
rt.cfg['ANALYZE_FLUX'] = args.flux
rt.cfg['ANALYZE_ASSOC'] = args.associate
rt.cfg['ANALYZE_ASSOC_FRACTION'] = args.fractObjs
if args.FitDisplay:
parser.add_argument('--logfile',dest='logfile', default='rts2-debug'.format(prg), help=': %(default)s, logfile name')
parser.add_argument('--toconsole', dest='toconsole', action='store_true', default=False, help=': %(default)s, log to console')
parser.add_argument('--config', dest='config', action='store', default='/usr/local/etc/rts2/rts2saf/rts2saf.cfg', help=': %(default)s, configuration file path')
parser.add_argument('--queue', dest='queue', action='store', default='focusing', help=': %(default)s, queue where to set a focus run')
parser.add_argument('--tarid', dest='tarId', action='store', default=5, help=': %(default)s, target id of OnTargetFocus')
parser.add_argument('--fwhmthreshold', dest='fwhmThreshold', action='store', type=float, default=None, help=': %(default)s, threshold to trigger a focus run')
parser.add_argument('--fitsFn', dest='fitsFn', action='store', default=None, help=': %(default)s, fits file to process')
parser.add_argument('--ds9display', dest='Ds9Display', action='store_true', default=False, help=': %(default)s, display fits images and region files')
args=parser.parse_args()
# logger
logger= Logger(debug=args.debug, args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt=Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error('rts2saf_focus: exiting, check the configuration file: {0}'.format(args.config))
sys.exit(1)
sex= Sextract(debug=args.debug, rt=rt, logger=logger)
if args.fitsFn==None:
logger.error('rts2af_fwhm: no --fitsFn specified, exiting'.format(args.fitsFn))
sys.exit(1)
elif not os.path.exists(args.fitsFn):
logger.error('rts2af_fwhm: file: {0}, does not exist, exiting'.format(args.fitsFn))
sys.exit(1)
parser.add_argument('--debug', dest='debug', action='store_true', default=False, help=': %(default)s,add more output')
parser.add_argument('--level', dest='level', default='INFO', help=': %(default)s, debug level')
parser.add_argument('--topath', dest='toPath', metavar='PATH', action='store', default='/var/log', help=': %(default)s, write log file to path') # needs a path where it can always write
parser.add_argument('--logfile',dest='logfile', default='rts2-debug', help=': %(default)s, logfile name')
parser.add_argument('--toconsole', dest='toconsole', action='store_true', default=False, help=': %(default)s, log to console')
parser.add_argument('--config', dest='config', action='store', default='/usr/local/etc/rts2/rts2saf/rts2saf.cfg', help=': %(default)s, configuration file path')
parser.add_argument( metavar='FITS FN', dest='fitsFn', nargs=1, default=None, help=': %(default)s, FITS file name')
args=parser.parse_args()
logger= Logger(debug=args.debug, args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt=Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error('[0]: exiting, check the configuration file: {1}'.format(script, args.config))
sys.exit(1)
if not args.fitsFn:
parser.print_help()
logger.warn('{0}: no FITS file specified'.format(script))
sys.exit(1)
fitsFn=args.fitsFn[0]
if not os.path.exists(fitsFn):
logger.error('{0}: file: {1}, does not exist, exiting'.format(script, fitsFn))
sys.exit(1)
# logger
logger = Logger(
debug=args.debug,
args=args).logger # if you need to chage the log format do it here
# hint to the user
if defaultCfg in args.config:
logger.info(
'rts2saf_focus: using default configuration file: {0}'.format(
args.config))
# config
rtc = Configuration(logger=logger)
if not rtc.readConfiguration(fileName=args.config):
logger.error(
'rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'
.format(args.config))
sys.exit(1)
# overwrite config defaults
rtc.cfg['ANALYZE_FLUX'] = args.flux
rtc.cfg['ANALYZE_ASSOC'] = args.associate
rtc.cfg['ANALYZE_ASSOC_FRACTION'] = args.fractObjs
rtc.cfg['FOCUSER_INTERVAL'] = args.focuserInterval
rtc.cfg['WEIGHTED_MEANS'] = args.means
if args.FitDisplay:
rtc.cfg['WITH_MATHPLOTLIB'] = True
if args.emptySlots is not None:
rtc.cfg['EMPTY_SLOT_NAMES'] = [x.strip() for x in args.emptySlots]
'--ds9display',
dest='Ds9Display',
action='store_true',
default=False,
help=': %(default)s, display fits images and region files')
args = parser.parse_args()
# logger
logger = Logger(
debug=args.debug,
args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt = Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error(
'rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'
.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error(
'rts2saf_focus: exiting, check the configuration file: {0}'.format(
args.config))
sys.exit(1)
sex = Sextract(debug=args.debug, rt=rt, logger=logger)
if args.fitsFn == None:
logger.error('rts2af_fwhm: no --fitsFn specified, exiting'.format(
args.fitsFn))
sys.exit(1)
args = parser.parse_args()
if args.debug:
args.level = 'DEBUG'
args.toconsole = True
# logger
logger = Logger(debug = args.debug, args = args).logger # if you need to chage the log format do it here
# hint to the user
if defaultCfg in args.config:
logger.info('rts2saf_focus: using default configuration file: {0}'.format(args.config))
# config
rtc = Configuration(logger = logger)
if not rtc.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
# overwrite config defaults
rtc.cfg['ANALYZE_FLUX'] = args.flux
rtc.cfg['ANALYZE_ASSOC'] = args.associate
rtc.cfg['ANALYZE_ASSOC_FRACTION'] = args.fractObjs
rtc.cfg['FOCUSER_INTERVAL'] = args.focuserInterval
rtc.cfg['WEIGHTED_MEANS'] = args.means
if args.FitDisplay:
rtc.cfg['WITH_MATHPLOTLIB'] = True
if args.emptySlots is not None:
rtc.cfg['EMPTY_SLOT_NAMES'] = [ x.strip() for x in args.emptySlots ]
