def test_maps_response(self):
"""We map the response to a RWSSubjects instance"""
response_content = """ <ODM FileType="Snapshot"
FileOID="770f1758-db33-4ab2-af72-38db863734aa"
CreationDateTime="2013-04-08T14:08:06.875-00:00"
ODMVersion="1.3">
<ClinicalData StudyOID="Fixitol(Dev)" MetaDataVersionOID="1111">
<SubjectData SubjectKey="000001">
<SiteRef LocationOID="BP001"/>
</SubjectData>
</ClinicalData>
<ClinicalData StudyOID="Fixitol(Dev)" MetaDataVersionOID="1111">
<SubjectData SubjectKey="1111">
<SiteRef LocationOID="335566"/>
</SubjectData>
</ClinicalData>
</ODM>
"""
request = StudySubjectsRequest("Fixitol",
"Dev")
req = mock.Mock(requests.Request, text=response_content)
response = request.result(req)
self.assertTrue(isinstance(response, RWSSubjects))
for subject in response:
self.assertTrue(isinstance(subject, RWSSubjectListItem))
self.assertTrue(subject.subject_name in ['000001', "1111"])
def test_maps_response(self):
"""We map the response to a RWSSubjects instance"""
response_content = """ <ODM FileType="Snapshot"
FileOID="770f1758-db33-4ab2-af72-38db863734aa"
CreationDateTime="2013-04-08T14:08:06.875-00:00"
ODMVersion="1.3">
<ClinicalData StudyOID="Fixitol(Dev)" MetaDataVersionOID="1111">
<SubjectData SubjectKey="000001">
<SiteRef LocationOID="BP001"/>
</SubjectData>
</ClinicalData>
<ClinicalData StudyOID="Fixitol(Dev)" MetaDataVersionOID="1111">
<SubjectData SubjectKey="1111">
<SiteRef LocationOID="335566"/>
</SubjectData>
</ClinicalData>
</ODM>
"""
request = StudySubjectsRequest("Fixitol", "Dev")
req = mock.Mock(requests.Request, text=response_content)
response = request.result(req)
self.assertTrue(isinstance(response, RWSSubjects))
for subject in response:
self.assertTrue(isinstance(subject, RWSSubjectListItem))
self.assertTrue(subject.subject_name in ['000001', "1111"])
def test_request_uuid_type(self):
"""
Confirm we request the UUID Subject Key Type
"""
request = StudySubjectsRequest(self.project_name, self.environment,
subject_key_type="SubjectUUID")
self.assertTrue("subjectKeyType=SubjectUUID" in request.url_path())
def test_request_with_status(self):
"""
Confirm we request the status when asked to
"""
request = StudySubjectsRequest(self.project_name,
self.environment,
status=True)
self.assertTrue("status=all" in request.url_path())
def test_request_uuid_type(self):
"""
Confirm we request the UUID Subject Key Type
"""
request = StudySubjectsRequest(self.project_name,
self.environment,
subject_key_type="SubjectUUID")
self.assertTrue("subjectKeyType=SubjectUUID" in request.url_path())
def test_subj_key_type_is_valid(self):
"""
Confirm that only valid SubjectKeyTypes are accepted
"""
with self.assertRaises(ValueError) as err:
request = StudySubjectsRequest(self.project_name,
self.environment,
subject_key_type="AnApple")
self.assertEqual(str(err.exception),
"SubjectKeyType AnApple is not a valid value")
request = StudySubjectsRequest(self.project_name,
self.environment,
subject_key_type="SubjectName")
self.assertEqual(self.project_name, request.project_name)
def get_rave_subjects():
"""
Gets a list of Patients registered
:return:
"""
client = RWSConnection(domain=RAVE_URL,
username=RAVE_USER,
password=RAVE_PASSWORD)
subjects = client.send_request(
StudySubjectsRequest(STUDY, ENV, subject_key_type='SubjectUUID'))
return subjects
def test_request_with_include(self):
"""
Confirm we request the status when asked to
"""
request = StudySubjectsRequest(self.project_name, self.environment, include="inactive")
self.assertTrue("include=inactive" in request.url_path())
request = StudySubjectsRequest(self.project_name, self.environment, include="inactiveAndDeleted")
self.assertTrue("include=inactiveAndDeleted" in request.url_path())
request = StudySubjectsRequest(self.project_name, self.environment, include="deleted")
self.assertTrue("include=deleted" in request.url_path())
with self.assertRaises(ValueError) as err:
request = StudySubjectsRequest(self.project_name, self.environment, include="kitchen_sink")
self.assertEqual("If provided, included must be one of inactive,deleted,inactiveAndDeleted",
err.exception.message)
def test_request_without_type(self):
"""
Confirm we request the UUID Subject Key Type
"""
request = StudySubjectsRequest(self.project_name, self.environment)
self.assertFalse("subjectKeyType" in request.url_path())
def test_request_with_include(self):
"""
Confirm we request the status when asked to
"""
request = StudySubjectsRequest(self.project_name,
self.environment,
include="inactive")
self.assertTrue("include=inactive" in request.url_path())
request = StudySubjectsRequest(self.project_name,
self.environment,
include="inactiveAndDeleted")
self.assertTrue("include=inactiveAndDeleted" in request.url_path())
request = StudySubjectsRequest(self.project_name,
self.environment,
include="deleted")
self.assertTrue("include=deleted" in request.url_path())
with self.assertRaises(ValueError) as err:
request = StudySubjectsRequest(self.project_name,
self.environment,
include="kitchen_sink")
self.assertEqual(
"If provided, included must be one of inactive,deleted,inactiveAndDeleted",
str(err.exception))
def get_subject_data(study_list=[]):
for final in study_list:
subject_data = rws_connection.send_request(
StudySubjectsRequest(project_name=final,
environment_name='Prod'))
def test_request_with_status(self):
"""
Confirm we request the status when asked to
"""
request = StudySubjectsRequest(self.project_name, self.environment, status=True)
self.assertTrue("status=all" in request.url_path())
def test_request_without_type(self):
"""
Confirm we request the UUID Subject Key Type
"""
request = StudySubjectsRequest(self.project_name, self.environment)
self.assertFalse("subjectKeyType" in request.url_path())
