def test_gru():
hidden_units = 33
batch_size = 13
time_steps = 7
embedding_size = 8
time_major = snp.TIME_MAJOR
# tensorflow results
gru = tf.contrib.rnn.GRUCell(hidden_units, activation=tf.nn.tanh)
# initial state of the GRU
state = np.repeat(np.asarray(np.random.rand(1, hidden_units), dtype=DTYPE),
batch_size,
axis=0)
# inputs to GRU
if time_major:
inputs = np.asarray(np.random.rand(time_steps, batch_size,
embedding_size),
dtype=DTYPE)
sequence_length = np.random.randint(1, time_steps + 1, batch_size)
else:
inputs = np.asarray(np.random.rand(batch_size, time_steps,
embedding_size),
dtype=DTYPE)
sequence_length = np.random.randint(1, time_steps + 1, batch_size)
outputs, _ = tf.nn.dynamic_rnn(cell=gru,
inputs=tf.convert_to_tensor(inputs),
sequence_length=sequence_length,
initial_state=state,
dtype=DTYPE,
time_major=time_major)
# get outputs of tensorflow
init = tf.global_variables_initializer()
train_vars = tf.trainable_variables()
with tf.Session() as sess:
sess.run(init)
train_vars_vals = sess.run(train_vars)
dict_var_vals = {
k.name.split(':')[0]: v
for k, v in zip(train_vars, train_vars_vals)
}
outputs_tf = sess.run(outputs)
# test numpy implementation
gru_np = snp.GRUCell(state, activation=np.tanh, base_name='rnn')
graph = snp.Graph()
graph.initialize(dict_var_vals)
outputs_np, _ = gru_np.encode(inputs, sequence_length=sequence_length)
np.testing.assert_array_almost_equal(outputs_tf, outputs_np)
def test_attention():
batch_size = 5
attention_time_steps = 6
attention_size = 7
state_size = 8
encoder_output_size = 9
# random input
if snp.TIME_MAJOR:
attention_keys = np.asarray(np.random.rand(attention_time_steps,
batch_size, attention_size),
dtype=DTYPE)
attention_values_np = np.asarray(np.random.rand(
attention_time_steps, batch_size, encoder_output_size),
dtype=DTYPE)
else:
attention_keys = np.asarray(np.random.rand(batch_size,
attention_time_steps,
attention_size),
dtype=DTYPE)
attention_values_np = np.asarray(np.random.rand(
batch_size, attention_time_steps, encoder_output_size),
dtype=DTYPE)
attention_values = tf.convert_to_tensor(attention_values_np,
name='attention_values')
attention_values_length = np.random.randint(1, attention_time_steps + 1,
batch_size)
attention = Attention(state_size,
tf.convert_to_tensor(attention_keys),
attention_values,
attention_values_length,
name='attention_test')
# random query
query = np.asarray(np.random.rand(batch_size, state_size), dtype=DTYPE)
# test normalized scores and context
scores_normalized, context = attention.compute_scores(query)
init = tf.global_variables_initializer()
# get weight
train_vars = tf.trainable_variables()
with tf.Session() as sess:
sess.run(init)
train_vars_vals = sess.run(train_vars)
dict_var_vals = {
k.name.split(':')[0]: v
for k, v in zip(train_vars, train_vars_vals)
}
scores_normalized_tf, context_tf = sess.run(
[scores_normalized, context])
# test np implementation
attention_np = Attention_np(attention_keys,
attention_values_np,
attention_values_length,
name='attention_test')
graph = snp.Graph()
graph.initialize(dict_var_vals)
scores_normalized_np, context_np = attention_np.compute_scores(query)
np.testing.assert_array_almost_equal(scores_normalized_np,
scores_normalized_tf)
np.testing.assert_array_almost_equal(context_np, context_tf)
def build_attention_model_np(params,
dict_var_vals,
src_vocab,
trg_vocab,
source_ids,
source_seq_length,
beam_size=1,
max_step=100):
"""
Build the model.
:param params: see `sequencing`.
:param dict_var_vals: numpy array of trained variables
:param src_vocab:
:param trg_vocab:
:param source_ids:
:param source_seq_length:
:param beam_size:
:param max_step:
:return:
"""
mode = MODE.INFER
batch_size = 1
graph = sqn.Graph()
# Because source encoder is different to the target feedback,
# we construct source_embedding_table manually
source_embedding_table = sqn.LookUpOp(name='source')
state_size = params['encoder']['rnn_cell']['state_size']
init_states = []
if params['encoder']['rnn_cell']['cell_name'] != 'BasicLSTMCell':
init_states.append(np.zeros((batch_size, state_size), dtype=DTYPE))
init_states.append(np.zeros((batch_size, state_size), dtype=DTYPE))
else:
init_states.append((np.zeros(
(batch_size, state_size), dtype=DTYPE), ) * 2)
init_states.append((np.zeros(
(batch_size, state_size), dtype=DTYPE), ) * 2)
encoder = sqn.StackBidirectionalRNNEncoder(params['encoder'],
init_states=init_states,
name='stack_rnn')
# initialize encoder first
graph.initialize(dict_var_vals)
source_embedded = source_embedding_table(source_ids)
encoded_representation = encoder.encode(source_embedded, source_seq_length)
attention_keys = encoded_representation.attention_keys
attention_values = encoded_representation.attention_values
attention_length = encoded_representation.attention_length
# feedback
feedback = sqn.BeamFeedBack(trg_vocab,
beam_size,
max_step,
name='feedback')
# attention
attention = sqn.Attention(attention_keys, attention_values,
attention_length)
init_states = []
if params['decoder']['rnn_cell']['cell_name'] != 'BasicLSTMCell':
init_states.append(
np.zeros((batch_size * beam_size, state_size), dtype=DTYPE))
init_states.append(
np.zeros((batch_size * beam_size, state_size), dtype=DTYPE))
else:
init_states.append((np.zeros(
(batch_size * beam_size, state_size), dtype=DTYPE), ) * 2)
init_states.append((np.zeros(
(batch_size * beam_size, state_size), dtype=DTYPE), ) * 2)
# decoder
decoder = sqn.AttentionRNNDecoder(params['decoder'],
attention,
feedback,
init_states=init_states,
mode=mode,
name='attention_decoder')
# initialize decoder
graph.initialize(dict_var_vals)
decoder_output, decoder_final_state = sqn.decode_loop(decoder)
return decoder_output, decoder_final_state
def test_attention_decoder():
batch_size = 5
attention_time_steps = 6
attention_size = 7
encoder_output_size = 9
time_steps = 20
vocab_size = 17
embedding_dim = 12
decoder_state_size = 19
# ---------------------------
# construct attention
# random input
if snp.TIME_MAJOR:
attention_keys = np.asarray(
np.random.rand(attention_time_steps, batch_size, attention_size),
dtype=DTYPE)
attention_values_np = np.asarray(
np.random.rand(attention_time_steps, batch_size,
encoder_output_size), dtype=DTYPE)
else:
attention_keys = np.asarray(
np.random.rand(batch_size, attention_time_steps, attention_size),
dtype=DTYPE)
attention_values_np = np.asarray(
np.random.rand(batch_size, attention_time_steps,
encoder_output_size), dtype=DTYPE)
attention_values = tf.convert_to_tensor(attention_values_np,
name='attention_values')
attention_values_length = np.random.randint(1, attention_time_steps + 1,
batch_size)
attention = Attention(decoder_state_size,
tf.convert_to_tensor(attention_keys),
attention_values, attention_values_length,
name='attention_decoder_test_decode')
# ----------------------------------------------
# construct feedback
vocab = Vocab([chr(ord('a') + i) for i in range(vocab_size)],
embedding_dim)
# dynamical batch size
inputs = tf.placeholder(tf.int32, shape=(None, None),
name='source_ids')
sequence_length = tf.placeholder(tf.int32, shape=(None,),
name='source_seq_length')
sequence_length_np = np.random.randint(1, time_steps + 1, batch_size,
dtype=np.int32)
# inputs to encoder
if snp.TIME_MAJOR:
inputs_np = np.random.randint(0, vocab_size, (time_steps, batch_size),
dtype=np.int32)
else:
inputs_np = np.random.randint(0, vocab_size, (batch_size, time_steps),
dtype=np.int32)
feedback = TrainingFeedBack(inputs, sequence_length, vocab,
name='attention_decoder_test_decode')
# --------------------------------------------------
# construct decoder
decoder_params = {'rnn_cell': {'cell_name': 'BasicLSTMCell',
'state_size': decoder_state_size,
'num_layers': 2,
'input_keep_prob': 1.0,
'output_keep_prob': 1.0},
'trg_vocab_size': vocab_size}
decoder = AttentionRNNDecoder(decoder_params, attention, feedback,
mode=MODE.EVAL,
name='attention_decoder_test_decode')
decoder_output, _ = dynamic_decode(decoder)
init = tf.global_variables_initializer()
# get weight
train_vars = tf.trainable_variables()
with tf.Session() as sess:
sess.run(init)
train_vars_vals = sess.run(train_vars)
dict_var_vals = {k.name.split(':')[0]: v for k, v in zip(train_vars,
train_vars_vals)}
decoder_output_tf = sess.run([decoder_output], feed_dict={inputs:
inputs_np,
sequence_length: sequence_length_np})
init_state = decoder.cell.zero_state(batch_size, dtype=DTYPE)
init_state_np = sess.run([init_state])[0]
# test np implementation
attention_np = Attention_np(attention_keys, attention_values_np,
attention_values_length,
name='attention_decoder_test_decode')
feedback_np = TrainingFeedBackTest(inputs_np,
sequence_length_np,
vocab,
name='attention_decoder_test_decode')
decoder_np = AttentionRNNDecoder_np(decoder_params, attention_np,
feedback_np, init_state_np,
name='attention_decoder_test_decode')
graph = snp.Graph()
graph.initialize(dict_var_vals)
decoder_output_np, _ = decode_loop(decoder_np)
np.testing.assert_array_almost_equal(decoder_output_tf[0].logits,
decoder_output_np['logits'])
np.testing.assert_array_almost_equal(decoder_output_tf[0].logits,
decoder_output_np['logits'])
np.testing.assert_array_almost_equal(decoder_output_tf[0].predicted_ids,
decoder_output_np['predicted_ids'])
np.testing.assert_array_almost_equal(decoder_output_tf[0].predicted_ids,
decoder_output_np['predicted_ids'])
def test_training_feedback():
batch_size = 2
time_steps = 4
vocab_size = 17
embedding_dim = 12
vocab = Vocab([chr(ord('a') + i) for i in range(vocab_size)],
embedding_dim)
# dynamical batch size
inputs = tf.placeholder(tf.int32, shape=(None, None), name='source_ids')
sequence_length = tf.placeholder(tf.int32,
shape=(None, ),
name='source_seq_length')
feedback = TrainingFeedBack(inputs,
sequence_length,
vocab,
name='feedback_test')
finished_list = []
output_list = []
for i in range(time_steps):
outputs = feedback.next_inputs(i)
finished_list.append(outputs[0])
output_list.append(outputs[1])
sequence_length_np = np.random.randint(1,
time_steps + 1,
batch_size,
dtype=np.int32)
sequence_length_np_b2 = np.random.randint(1,
time_steps + 1,
batch_size * 2,
dtype=np.int32)
if TIME_MAJOR:
inputs_np = np.random.randint(0,
vocab_size, (time_steps, batch_size),
dtype=np.int32)
inputs_np_b2 = np.random.randint(0,
vocab_size,
(time_steps, batch_size * 2),
dtype=np.int32)
else:
inputs_np = np.random.randint(0,
vocab_size, (batch_size, time_steps),
dtype=np.int32)
inputs_np_b2 = np.random.randint(0,
vocab_size,
(batch_size * 2, time_steps),
dtype=np.int32)
init = tf.global_variables_initializer()
train_vars = tf.trainable_variables()
with tf.Session() as sess:
sess.run(init)
train_vars_vals = sess.run(train_vars)
dict_var_vals = {
k.name.split(':')[0]: v
for k, v in zip(train_vars, train_vars_vals)
}
tf_outputs = sess.run(finished_list + output_list,
feed_dict={
inputs: inputs_np,
sequence_length: sequence_length_np
})
tf_outputs_b2 = sess.run(finished_list + output_list,
feed_dict={
inputs: inputs_np_b2,
sequence_length: sequence_length_np_b2
})
# print(inputs_np, tf_outputs, tf_outputs_b2, dict_var_vals)
feedback_np = TrainingFeedBackTest(inputs_np,
sequence_length_np,
vocab,
name='feedback_test')
graph = snp.Graph()
graph.initialize(dict_var_vals)
for idx in range(time_steps):
outputs_np = feedback_np.next_inputs(idx)
np.testing.assert_array_almost_equal(outputs_np[1],
tf_outputs[idx + time_steps])
np.testing.assert_array_almost_equal(outputs_np[0], tf_outputs[idx])
def test_stack_bidir_rnn_encoder_lstm():
graph = snp.Graph()
graph.clear_layers()
stack_bidir_rnn_encoder('BasicLSTMCell', 'bir_lstm')
graph.clear_layers()
def test_stack_bidir_rnn_encoder_gru():
graph = snp.Graph()
graph.clear_layers()
stack_bidir_rnn_encoder('GRUCell')
graph.clear_layers()
def test_stack_bidir_rnn_encoder_rnn():
graph = snp.Graph()
graph.clear_layers()
stack_bidir_rnn_encoder('BasicRNNCell', 'rnn')
graph.clear_layers()
def stack_bidir_rnn_encoder(rnn_cell, name=None):
time_steps = 4
hidden_units = 32
batch_size = 6
num_layers = 7
input_size = 8
attention_size = 9
time_major = TIME_MAJOR
params = {
'rnn_cell': {
'state_size': hidden_units,
'cell_name': rnn_cell,
'num_layers': num_layers,
'input_keep_prob': 1.0,
'output_keep_prob': 1.0
},
'attention_key_size': attention_size
}
encoder = StackBidirectionalRNNEncoder(params, mode=MODE.INFER, name=name)
# inputs to encoder
if time_major:
inputs = np.asarray(np.random.rand(time_steps, batch_size, input_size),
dtype=DTYPE)
sequence_length = np.random.randint(1, time_steps + 1, batch_size)
else:
inputs = np.asarray(np.random.rand(batch_size, time_steps, input_size),
dtype=DTYPE)
sequence_length = np.random.randint(1, time_steps + 1, batch_size)
output = encoder.encode(tf.convert_to_tensor(inputs), sequence_length)
# get outputs of tensorflow
init = tf.global_variables_initializer()
train_vars = tf.trainable_variables()
with tf.Session() as sess:
sess.run(init)
train_vars_vals = sess.run(train_vars)
dict_var_vals = {
k.name.split(':')[0]: v
for k, v in zip(train_vars, train_vars_vals)
}
output_tf = sess.run([output[0], output[1], output[2], output[3]])
init_states = []
for i in range(num_layers):
if rnn_cell != 'BasicLSTMCell':
init_states.append(
np.zeros((batch_size, hidden_units), dtype=DTYPE))
init_states.append(
np.zeros((batch_size, hidden_units), dtype=DTYPE))
else:
init_states.append((np.zeros(
(batch_size, hidden_units), dtype=DTYPE), ) * 2)
init_states.append((np.zeros(
(batch_size, hidden_units), dtype=DTYPE), ) * 2)
encoder_np = snp.StackBidirectionalRNNEncoder(params, init_states, name)
graph = snp.Graph()
graph.initialize(dict_var_vals)
output_np = encoder_np.encode(inputs, sequence_length)
np.testing.assert_array_almost_equal(output_np[0], output_tf[0])
np.testing.assert_array_almost_equal(output_np[1], output_tf[1])
np.testing.assert_array_almost_equal(output_np[2], output_tf[2])
np.testing.assert_array_almost_equal(output_np[3], output_tf[3])
