def test_template(self):
backbone = create_backbone()
template = backbone.template('strand1', 'strand2')
self.assertEqual(
template, ''.join([
'test_flanks5_s', 'strand1', 'test_loop_s', 'strand2',
'test_flanks3_s'
]).upper())
def test_template(self):
backbone = create_backbone()
template = backbone.template()
self.assertEqual(
template,
''.join(
['test_flanks5_s', 'test_siRNA1',
'test_loop_s', 'test_siRNA2', 'test_flanks3_s']
).upper()
)
def test_adjusted_frames(self):
seq1 = 'acgt'
seq2 = 'gtac'
shift_left = 0
shift_right = 0
backbone = create_backbone()
backbone.active_strand = 3
all_frames = [backbone]
results = adjusted_frames(
seq1, seq2, shift_left, shift_right, all_frames
)
self.assertEqual(all_frames, results)
