class Segment(waves.Segment, heat_map.Segment):
def __init__(self, *args):
waves.Segment.__init__(self, *args)
heat_map.Segment.__init__(self, *args)
self._amp_smoother = Smoother(response_factor=2.5)
def relative_size(self):
age = self.age()
if age > (self.duration - self._fade_time):
return 1 - sigmoid(1 - (self.duration - age) / self._fade_time)
else:
self._amp_smoother.smooth(
max([abs(value) for value in self.waveform]),
self.visualizer.time_increment)
return sigmoid(pow(max(self._amp_smoother.value(), 0), 0.25))
class Ancestry(visualizer.Visualizer, AncestryPlotter):
def __init__(self, tr_log, pieces, args):
visualizer.Visualizer.__init__(self, args)
AncestryPlotter.__init__(self, tr_log.total_file_size(), tr_log.lastchunktime(), args)
self._unfold_function = getattr(self, "_unfold_%s" % args.unfold)
self._pre_render()
self._autozoom = (args.geometry == CIRCLE and self.args.autozoom)
if self._autozoom:
self._max_pxy = 0
self._zoom_smoother = Smoother()
@staticmethod
def add_parser_arguments(parser):
AncestryPlotter.add_parser_arguments(parser)
visualizer.Visualizer.add_parser_arguments(parser)
parser.add_argument("-z", dest="timefactor", type=float, default=1.0)
def _pre_render(self):
print "pre-rendering..."
self._timeline = []
for piece in pieces:
self.add_piece(piece["id"], piece["t"], piece["begin"], piece["end"])
frame = {"t": piece["t"],
"tracker": copy.deepcopy(self._tracker),
"num_pieces": self._num_pieces}
self._timeline.append(frame)
print "ok"
def InitGL(self):
visualizer.Visualizer.InitGL(self)
glClearColor(0.0, 0.0, 0.0, 0.0)
def ReSizeGLScene(self, width, height):
visualizer.Visualizer.ReSizeGLScene(self, width, height)
self._size = min(width, height) - 2*MARGIN
AncestryPlotter.set_size(self, self._size, self._size)
def render(self):
glTranslatef(MARGIN + (self.width - self._size)/2, MARGIN, 0)
glLineWidth(LINE_WIDTH * self.width)
glEnable(GL_LINE_SMOOTH)
glHint(GL_LINE_SMOOTH_HINT, GL_NICEST)
glEnable(GL_BLEND)
glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA)
glColor3f(1,1,1)
self._unfold_function(self.current_time() * self.args.timefactor)
frame = self._frame_at_cursor()
self._activate_frame(frame)
if self._autozoom:
self._zoom = self._zoom_smoother.value()
if self._zoom is None:
self._zoom = 0.0
else:
self._zoom = 1.0
self.plot()
if self._autozoom:
if self._max_pxy == 0:
zoom = 0.5
else:
zoom = 0.5 + self.cursor_t/self._duration * 0.5 / self._max_pxy
self._zoom_smoother.smooth(zoom, self.time_increment)
def _unfold_backward(self, t):
self._cursor_t = self._duration - t % self._duration
def _unfold_forward(self, t):
self._cursor_t = t % self._duration
def _frame_at_cursor(self):
for frame in self._timeline:
if frame["t"] >= self._cursor_t:
return frame
return self._timeline[-1]
def _activate_frame(self, frame):
self._num_pieces = frame["num_pieces"]
self._tracker = frame["tracker"]
# def _follow_piece(self, piece):
# if len(piece.growth) > 0:
# path = [(piece.t,
# (piece.begin + piece.end) / 2)]
# for older_version in reversed(piece.growth):
# path.append((older_version.t,
# (older_version.begin + older_version.end) / 2))
# self.draw_path(path)
# for parent in piece.parents.values():
# if self.min_t < parent.t < self.max_t:
# self._connect_child_and_parent(
# piece.t, (piece.begin + piece.end) / 2,
# parent.t, (parent.begin + parent.end) / 2)
# self._follow_piece(parent)
# else:
# if self.args.unfold == BACKWARD:
# t = self.cursor_t - pow(self.cursor_t - parent.t, 0.7)
# else:
# t = self.cursor_t
# self._connect_child_and_parent(
# piece.t, (piece.begin + piece.end) / 2,
# t, (parent.begin + parent.end) / 2)
def _rect_position(self, t, byte_pos):
x = float(byte_pos) / self._total_size * self._width
y = (1 - t / self._duration) * self._height
return x, y
def _circle_position(self, t, byte_pos):
angle = float(byte_pos) / self._total_size * 2*math.pi
rel_t = 1 - t / self._duration
px = rel_t * math.cos(angle)
py = rel_t * math.sin(angle)
x = self._width / 2 + (px * self._zoom) * self._width / 2
y = self._height / 2 + (py * self._zoom) * self._height / 2
if self._autozoom:
self._max_pxy = max([self._max_pxy, abs(px), abs(py)])
return x, y
def draw_path(self, points):
glBegin(GL_LINE_STRIP)
for (t, b) in points:
x, y = self._position(t, b)
glVertex2f(x, y)
glEnd()
def draw_curve(self, x1, y1, x2, y2):
control_points = [
Vector2d(x1, y1),
Vector2d(x1 + (x2 - x1) * 0.3, y1),
Vector2d(x1 + (x2 - x1) * 0.7, y2),
Vector2d(x2, y2)
]
bezier = make_bezier([(p.x, p.y) for p in control_points])
points = bezier(CURVE_PRECISION)
glBegin(GL_LINE_STRIP)
for x, y in points:
glVertex2f(x, y)
glEnd()
class Ancestry(visualizer.Visualizer, AncestryPlotter):
def __init__(self, tr_log, pieces, args):
visualizer.Visualizer.__init__(self, args)
AncestryPlotter.__init__(self, tr_log.total_file_size(), tr_log.lastchunktime(), args)
if args.unfold == BACKWARD:
for piece in pieces:
self.add_piece(piece["id"], piece["t"], piece["begin"], piece["end"])
elif args.unfold == FORWARD:
self._remaining_pieces = copy.copy(pieces)
self._autozoom = (args.geometry == CIRCLE and self.args.autozoom)
if self._autozoom:
self._max_pxy = 0
self._zoom_smoother = Smoother()
if args.node_style == CIRCLE:
self._node_plot_method = self._draw_node_circle
self._nodes = {}
else:
self._node_plot_method = None
if args.node_size_envelope:
attack, decay, sustain = args.node_size_envelope.split(",")
self._node_size_envelope = AdsrEnvelope(
attack, decay, sustain, args.node_size_envelope_slope)
else:
self._node_size_envelope = None
if args.sway_envelope:
attack, decay, sustain = args.sway_envelope.split(",")
self._sway_envelope = AdsrEnvelope(attack, decay, sustain)
else:
self._sway_envelope = None
@staticmethod
def add_parser_arguments(parser):
AncestryPlotter.add_parser_arguments(parser)
visualizer.Visualizer.add_parser_arguments(parser)
parser.add_argument("-z", dest="timefactor", type=float, default=1.0)
def InitGL(self):
visualizer.Visualizer.InitGL(self)
glClearColor(0.0, 0.0, 0.0, 0.0)
if self.args.node_style == CIRCLE:
self._node_circle_lists = []
for n in range(0, NODE_SIZE_PRECISION):
display_list = self.new_display_list_id()
self._node_circle_lists.append(display_list)
glNewList(display_list, GL_COMPILE)
self._render_node_circle(0, 0, n)
glEndList()
def ReSizeGLScene(self, width, height):
visualizer.Visualizer.ReSizeGLScene(self, width, height)
self._size = min(width, height) - 2*MARGIN
AncestryPlotter.set_size(self, self._size, self._size)
def render(self):
glTranslatef(MARGIN + (self.width - self._size)/2, MARGIN, 0)
glLineWidth(self.args.line_width)
glEnable(GL_LINE_SMOOTH)
glHint(GL_LINE_SMOOTH_HINT, GL_NICEST)
glEnable(GL_BLEND)
glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA)
glColor3f(1,1,1)
if self.args.unfold == BACKWARD:
self._cursor_t = self._duration - self._adjusted_current_time() % self._duration
elif self.args.unfold == FORWARD:
if self.args.ff:
self._add_oldest_remaining_piece()
else:
while (len(self._remaining_pieces) > 0 and
self._remaining_pieces[0]["t"] <= self._adjusted_current_time()):
self._add_oldest_remaining_piece()
if self._autozoom:
self._zoom = self._zoom_smoother.value()
if self._zoom is None:
self._zoom = 0.0
else:
self._zoom = 1.0
self.plot()
if self._autozoom:
if self._max_pxy == 0:
zoom = 0.5
else:
zoom = 0.5 + self._cursor_t/self._duration * 0.5 / self._max_pxy
self._zoom_smoother.smooth(zoom, self.time_increment)
def _add_oldest_remaining_piece(self):
piece = self._remaining_pieces.pop(0)
self.add_piece(piece["id"], piece["t"], piece["begin"], piece["end"])
def finished(self):
return self.current_time() > (self._duration / self.args.timefactor + SUSTAIN_TIME)
def _adjusted_current_time(self):
return self.current_time() * self.args.timefactor
def _follow_piece(self, piece, child=None):
self._update_and_draw_node(piece, piece.t, (piece.begin + piece.end) / 2)
if len(piece.growth) > 0:
path = [(piece.t,
(piece.begin + piece.end) / 2)]
for older_version in reversed(piece.growth):
if self.args.unfold == FORWARD or self._cursor_t < older_version.t:
path.append((older_version.t,
(older_version.begin + older_version.end) / 2))
self.draw_path(piece, path)
self._update_and_draw_node(piece, path[-1][0], path[-1][1])
for parent in piece.parents.values():
if self.args.unfold == FORWARD or self._cursor_t < parent.t:
self._connect_generations(parent, piece, child)
self._follow_piece(parent, piece)
else:
if self.args.unfold == BACKWARD:
t = self._cursor_t - pow(self._cursor_t - parent.t, 0.7)
else:
t = self._cursor_t
self._connect_generations(parent, piece, child, t)
self._update_and_draw_node(parent, t, (parent.begin + parent.end) / 2)
def _rect_position(self, t, byte_pos):
x = float(byte_pos) / self._total_size * self._width
y = (1 - t / self._duration) * self._height
return Vector2d(x, y)
def _circle_position(self, t, byte_pos):
angle = float(byte_pos) / self._total_size * 2*math.pi
rel_t = 1 - t / self._duration
px = rel_t * math.cos(angle)
py = rel_t * math.sin(angle)
x = self._width / 2 + (px * self._zoom) * self._width / 2
y = self._height / 2 + (py * self._zoom) * self._height / 2
if self._autozoom:
self._max_pxy = max([self._max_pxy, abs(px), abs(py)])
return Vector2d(x, y)
def draw_path(self, piece, points):
if self.args.sway:
piece_sway_magnitude = self._sway_magnitude(piece)
glBegin(GL_LINE_STRIP)
n = 0
for (t, b) in points:
x, y = self._position(t, b)
if self.args.sway:
magnitude = (1 - float(n) / len(points)) * piece_sway_magnitude
x += piece.sway.sway.x * magnitude * self._size
y += piece.sway.sway.y * magnitude * self._size
n += 1
glVertex2f(x, y)
glEnd()
def draw_curve(self, x1, y1, x2, y2):
control_points = [
Vector2d(x1, y1),
Vector2d(x1 + (x2 - x1) * 0.3, y1),
Vector2d(x1 + (x2 - x1) * 0.7, y2),
Vector2d(x2, y2)
]
bezier = make_bezier([(p.x, p.y) for p in control_points])
points = bezier(CURVE_PRECISION)
glBegin(GL_LINE_STRIP)
for x, y in points:
glVertex2f(x, y)
glEnd()
def draw_line(self, x1, y1, x2, y2):
glBegin(GL_LINES)
glVertex2f(x1, y1)
glVertex2f(x2, y2)
glEnd()
def _update_and_draw_node(self, piece, t, b):
if self.args.sway:
self._update_sway(piece)
if self._node_plot_method:
self._node_plot_method(piece, t, b)
def _update_sway(self, piece):
if not hasattr(piece, "sway"):
piece.sway = Sway(self.args.sway_magnitude)
piece.sway.update(self.time_increment)
def _draw_node_circle(self, piece, t, b):
age = self._age(piece)
size = self._node_size(age)
cx, cy = self._position(t, b)
if self.args.sway:
piece_sway_magnitude = self._sway_magnitude(piece)
cx += piece.sway.sway.x * piece_sway_magnitude * self._size
cy += piece.sway.sway.y * piece_sway_magnitude * self._size
glPushMatrix()
glTranslatef(cx, cy, 0)
glCallList(self._node_circle_lists[size])
glPopMatrix()
def _age(self, piece):
try:
appearance_time = piece.appearance_time
except AttributeError:
appearance_time = piece.appearance_time = self._adjusted_current_time()
return self._adjusted_current_time() - appearance_time
def _node_size(self, age):
if self._node_size_envelope:
return int(self._node_size_envelope.value(age) * (NODE_SIZE_PRECISION-1))
else:
return NODE_SIZE_PRECISION-1
def _sway_magnitude(self, piece):
age = self._age(piece)
if self._sway_envelope:
return self._sway_envelope.value(age)
else:
return 1
def _render_node_circle(self, cx, cy, size):
# glColor3f(0,0,0)
# self._render_filled_circle(cx, cy, size)
# glColor3f(1,1,1)
# self._render_circle_outline(cx, cy, size)
# glColor3f(1,1,1)
# self._render_filled_circle(cx, cy, size)
glColor3f(1,1,1)
glEnable(GL_POINT_SMOOTH)
radius = max(self.args.node_size * self.width * size / (NODE_SIZE_PRECISION-1), 0.1)
glPointSize(radius * 2)
glBegin(GL_POINTS)
glVertex2f(cx, cy)
glEnd()
def _render_filled_circle(self, cx, cy, size):
glBegin(GL_TRIANGLE_FAN)
glVertex2f(cx, cy)
angle = 0
radius = self.args.node_size * self.width * size / (NODE_SIZE_PRECISION-1)
while angle < 2*math.pi:
x = cx + math.cos(angle) * radius
y = cy + math.sin(angle) * radius
glVertex2f(x, y)
angle += 0.1
x = cx + math.cos(0) * radius
y = cy + math.sin(0) * radius
glVertex2f(x, y)
glEnd()
def _render_circle_outline(self, cx, cy, size):
glBegin(GL_LINE_STRIP)
angle = 0
radius = self.args.node_size * self.width * size / (NODE_SIZE_PRECISION-1)
while angle < 2*math.pi:
x = cx + math.cos(angle) * radius
y = cy + math.sin(angle) * radius
glVertex2f(x, y)
angle += 0.1
glEnd()
