def test_read(self, mock_open, mock_update):
"""Test reading mock indata and check update arguments"""
mock_open.return_value = self.metadata
cfg = register_metadata("foo/bar", config = {})
args, kw = mock_update.call_args
self.assertDictEqual(args[0]['bio.ngs.tools.sratools']['_run2sample'], {'Run2S1': 'Sample1', 'Run1S2': 'Sample2', 'Run1S1': 'Sample1'})
self.assertEqual(args[0]['bio.ngs.tools.sratools']['_datadir'], 'foo')
def test_register_metadata(self):
"""Test registering metadata for non-existent file"""
register_metadata("foo.csv", config = {})