def matrixv2_raw(context, request):
fr = FieldedResponse(_meta={'params_parser': ParamsParser(request)},
response_fields=[
RawMatrixWithAggsResponseField(
default_item_types=DEFAULT_ITEM_TYPES)
])
return fr.render()
def searchv2_quick(context, request):
fr = FieldedResponse(
_meta={'params_parser': ParamsParser(request)},
response_fields=[
BasicSearchResponseField(default_item_types=DEFAULT_ITEM_TYPES)
])
return fr.render()
def audit(context, request):
fr = FieldedResponse(
_meta={
'params_parser': ParamsParser(request)
},
response_fields=[
TitleResponseField(
title=AUDIT_TITLE
),
TypeResponseField(
at_type=[AUDIT_TITLE]
),
IDResponseField(),
SearchBaseResponseField(),
ContextResponseField(),
AuditMatrixWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES
),
NotificationResponseField(),
FiltersResponseField(),
TypeOnlyClearFiltersResponseField(),
DebugQueryResponseField()
]
)
return fr.render()
def cart_search(context, request):
'''
Like search but takes cart params.
'''
# Note the order of rendering matters for some fields, e.g. AllResponseField and
# NotificationResponseField depend on results from CartSearchWithFacetsResponseField.
fr = FieldedResponse(_meta={'params_parser': ParamsParser(request)},
response_fields=[
TitleResponseField(title='Cart search'),
TypeResponseField(at_type=[SEARCH_TITLE]),
IDResponseField(),
ContextResponseField(),
CartSearchWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES,
cart=CartWithElements(request),
),
AllResponseField(),
NotificationResponseField(),
CartFiltersResponseField(),
ClearFiltersResponseFieldWithCarts(),
ColumnsResponseField(),
SortResponseField(),
DebugQueryResponseField()
])
return fr.render()
def search(context, request):
# Note the order of rendering matters for some fields, e.g. AllResponseField and
# NotificationResponseField depend on results from BasicSearchWithFacetsResponseField.
fr = FieldedResponse(
_meta={
'params_parser': ParamsParser(request)
},
response_fields=[
TitleResponseField(
title=SEARCH_TITLE
),
TypeResponseField(
at_type=[SEARCH_TITLE]
),
IDResponseField(),
ContextResponseField(),
BasicSearchWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES
),
AllResponseField(),
NotificationResponseField(),
FiltersResponseField(),
ClearFiltersResponseField(),
ColumnsResponseField(),
SortResponseField(),
DebugQueryResponseField()
]
)
return fr.render()
def summary(context, request):
fr = FieldedResponse(
_meta={
'params_parser': ParamsParser(request)
},
response_fields=[
TitleResponseField(
title=SUMMARY_TITLE
),
TypeResponseField(
at_type=[SUMMARY_TITLE]
),
IDResponseField(),
SearchBaseResponseField(),
ContextResponseField(),
BasicMatrixWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES,
matrix_definition_name=SUMMARY_MATRIX
),
NotificationResponseField(),
FiltersResponseField(),
TypeOnlyClearFiltersResponseField(),
DebugQueryResponseField()
]
)
return fr.render()
def mouse_development(context, request):
fr = FieldedResponse(
_meta={
'params_parser': ParamsParser(request)
},
response_fields=[
TitleResponseField(
title='Mouse Development Matrix'
),
TypeResponseField(
at_type=['MouseDevelopmentMatrix']
),
IDResponseField(),
SearchBaseResponseField(),
ContextResponseField(),
BasicMatrixWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES,
matrix_definition_name='mouse_development'
),
NotificationResponseField(),
FiltersResponseField(),
TypeOnlyClearFiltersResponseField(),
DebugQueryResponseField()
]
)
return fr.render()
def entex_matrix(context, request):
fr = FieldedResponse(
_meta={
'params_parser': ParamsParser(request)
},
response_fields=[
TitleResponseField(
title='Epigenomes from four individuals (ENTEx)'
),
TypeResponseField(
at_type=['EntexMatrix']
),
IDResponseField(),
SearchBaseResponseField(),
ContextResponseField(),
MissingMatrixWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES,
matrix_definition_name='entex'
),
NotificationResponseField(),
FiltersResponseField(),
TypeOnlyClearFiltersResponseField(),
DebugQueryResponseField()
]
)
return fr.render()
def report(context, request):
fr = FieldedResponse(
_meta={
'params_parser': ParamsParser(request)
},
response_fields=[
TitleResponseField(
title=REPORT_TITLE
),
TypeResponseField(
at_type=[REPORT_TITLE]
),
IDResponseField(),
ContextResponseField(),
BasicReportWithFacetsResponseField(),
AllResponseField(),
NotificationResponseField(),
FiltersResponseField(),
TypeOnlyClearFiltersResponseField(),
ColumnsResponseField(),
NonSortableResponseField(),
SortResponseField(),
DebugQueryResponseField()
]
)
return fr.render()
def test_searches_responses_fielded_response_render(dummy_request):
from snovault.elasticsearch.searches.responses import FieldedResponse
from snovault.elasticsearch.searches.responses import StreamedResponse
from snovault.elasticsearch.searches.parsers import ParamsParser
from pyramid.response import Response
fr = FieldedResponse()
fr.response = {'a': 1}
response = fr.render()
assert isinstance(response, dict)
fr.response = {'a': (x for x in [1, 2, 3])}
response = fr.render()
assert isinstance(response, Response)
assert isinstance(response.app_iter, StreamedResponse)
assert response.json == {'a': [1, 2, 3]}
dummy_request.__parent__ = 'something'
fr = FieldedResponse(_meta={'params_parser': ParamsParser(dummy_request)})
fr.response = {'a': (x for x in [1, 2, 3])}
response = fr.render()
assert isinstance(response, dict)
assert response == {'a': [1, 2, 3]}
def collection_view_listing_es(context, request):
if not hasattr(request,
'datastore') or request.datastore != ELASTIC_SEARCH:
return collection_view_listing_db(context, request)
fr = FieldedResponse(_meta={'params_parser': ParamsParser(request)},
response_fields=[
IDResponseField(),
CollectionSearchWithFacetsResponseField(),
AllResponseField(),
NotificationResponseField(),
FiltersResponseField(),
CollectionClearFiltersResponseField(),
ColumnsResponseField()
])
return fr.render()
def encore_rna_seq_matrix(context, request):
fr = FieldedResponse(
_meta={'params_parser': ParamsParser(request)},
response_fields=[
TitleResponseField(title='ENCORE RNA-seq Matrix'),
TypeResponseField(at_type=['EncoreRnaSeqMatrix']),
IDResponseField(),
SearchBaseResponseField(),
ContextResponseField(),
MissingMatrixWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES,
matrix_definition_name='encore_rna_seq_matrix'),
NotificationResponseField(),
FiltersResponseField(),
TypeOnlyClearFiltersResponseField(),
DebugQueryResponseField()
])
return fr.render()
def cart_matrix(context, request):
fr = FieldedResponse(
_meta={'params_parser': ParamsParser(request)},
response_fields=[
TitleResponseField(title='Cart matrix'),
TypeResponseField(at_type=[MATRIX_TITLE]),
IDResponseField(),
SearchBaseResponseField(search_base='/cart-search/'),
ContextResponseField(),
CartMatrixWithFacetsResponseField(
default_item_types=DEFAULT_ITEM_TYPES,
cart=CartWithElements(request),
),
NotificationResponseField(),
CartFiltersResponseField(),
TypeOnlyClearFiltersResponseFieldWithCarts(),
DebugQueryResponseField()
])
return fr.render()
