def test_sbt_combine(n_children):
factory = GraphFactory(31, 1e5, 4)
tree = SBT(factory, d=n_children)
tree_1 = SBT(factory, d=n_children)
tree_2 = SBT(factory, d=n_children)
n_leaves = 0
for f in utils.SIG_FILES:
sig = next(signature.load_signatures(utils.get_test_data(f)))
leaf = SigLeaf(os.path.basename(f), sig)
tree.add_node(leaf)
if n_leaves < 4:
tree_1.add_node(leaf)
else:
tree_2.add_node(leaf)
n_leaves += 1
tree_1.combine(tree_2)
t1_leaves = {str(l) for l in tree_1.leaves()}
t_leaves = {str(l) for l in tree.leaves()}
assert len(t1_leaves) == n_leaves
assert len(t_leaves) == len(t1_leaves)
assert t1_leaves == t_leaves
to_search = next(signature.load_signatures(
utils.get_test_data(utils.SIG_FILES[0])))
t1_result = {str(s) for s in tree_1.find(search_minhashes,
to_search, 0.1)}
tree_result = {str(s) for s in tree.find(search_minhashes,
to_search, 0.1)}
assert t1_result == tree_result
# TODO: save and load both trees
# check if adding a new node will use the next empty position
next_empty = 0
for n, d in enumerate(tree_1.nodes):
if n != d:
next_empty = n
break
if not next_empty:
next_empty = n + 1
tree_1.add_node(leaf)
assert tree_1.next_node == next_empty
def test_sbt_combine(n_children):
factory = GraphFactory(31, 1e5, 4)
tree = SBT(factory, d=n_children)
tree_1 = SBT(factory, d=n_children)
tree_2 = SBT(factory, d=n_children)
n_leaves = 0
for f in utils.SIG_FILES:
sig = next(signature.load_signatures(utils.get_test_data(f)))
leaf = SigLeaf(os.path.basename(f), sig)
tree.add_node(leaf)
if n_leaves < 4:
tree_1.add_node(leaf)
else:
tree_2.add_node(leaf)
n_leaves += 1
tree_1.combine(tree_2)
t1_leaves = {str(l) for l in tree_1.leaves()}
t_leaves = {str(l) for l in tree.leaves()}
assert len(t1_leaves) == n_leaves
assert len(t_leaves) == len(t1_leaves)
assert t1_leaves == t_leaves
to_search = next(
signature.load_signatures(utils.get_test_data(utils.SIG_FILES[0])))
t1_result = {str(s) for s in tree_1.find(search_minhashes, to_search, 0.1)}
tree_result = {str(s) for s in tree.find(search_minhashes, to_search, 0.1)}
assert t1_result == tree_result
# TODO: save and load both trees
# check if adding a new node will use the next empty position
next_empty = 0
for n, d in enumerate(tree_1.nodes):
if n != d:
next_empty = n
break
if not next_empty:
next_empty = n + 1
tree_1.add_node(leaf)
assert tree_1.next_node == next_empty
def test_search_minhashes():
factory = GraphFactory(31, 1e5, 4)
tree = SBT(factory)
n_leaves = 0
for f in utils.SIG_FILES:
sig = next(signature.load_signatures(utils.get_test_data(f)))
leaf = SigLeaf(os.path.basename(f), sig)
tree.add_node(leaf)
to_search = next(iter(tree.leaves()))
# this fails if 'search_minhashes' is calc containment and not similarity.
results = tree.find(search_minhashes, to_search.data, 0.08)
for leaf in results:
assert to_search.data.similarity(leaf.data) >= 0.08
print(results)
def test_search_minhashes():
factory = GraphFactory(31, 1e5, 4)
tree = SBT(factory)
n_leaves = 0
for f in utils.SIG_FILES:
sig = next(signature.load_signatures(utils.get_test_data(f)))
leaf = SigLeaf(os.path.basename(f), sig)
tree.add_node(leaf)
to_search = next(iter(tree.leaves()))
# this fails if 'search_minhashes' is calc containment and not similarity.
results = tree.find(search_minhashes, to_search.data, 0.08)
for leaf in results:
assert to_search.data.similarity(leaf.data) >= 0.08
print(results)
