Ejemplo n.º 1
0
def get_CSPAD_active_areas(image, version_phil):
    from libtbx.phil import parse
    from iotbx.detectors.npy import NpyImage
    from spotfinder.applications.xfel.cxi_phil import cxi_basic_start
    data = pickle.load(open(image, "rb"))
    scope = parse(file_name=version_phil)
    basic_scope = cxi_basic_start()
    new_scope = basic_scope.phil_scope.fetch(source=scope)
    phil = new_scope.extract()
    img = NpyImage("dummy", source_data=data)
    img.readHeader(phil)
    tm = img.get_tile_manager(phil)
    return list(tm.effective_tiling_as_flex_int())
Ejemplo n.º 2
0
 def tiling_from_image(self):
     if self.tm is not None:
         return self.tm
     labelit_regression = libtbx.env.find_in_repositories(
         relative_path="labelit_regression", test=os.path.isdir)
     if detector_phil is None:
         detector_phil = os.path.join(labelit_regression, "xfel",
                                      "cxi-10.1.phil")
     detector_scope = parse(file_name=detector_phil)
     basic_scope = cxi_basic_start()
     new_scope = basic_scope.phil_scope.fetch(source=detector_scope)
     tiling_phil = new_scope.extract()
     img = NpyImage("dummy", source_data=img_data)
     img.readHeader(tiling_phil)
     self.tm = img.get_tile_manager(phil)
     return self.tm