def test_evaluateCohortWithWrongFHIREndpointPort(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = date.today()
request_data = reqdata_path + "LungCancerScreeningWithSNOMEDcodes-cohort-wrong-fhirendpoint-port-request-data.json"
cqldefn = cqldefnzip_path + "lung_cancer_screening_with_snomed_codes_v1_0_1.zip"
try:
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
result = resp.read()
except ApiException as e:
print("Exception when calling CohortEvaluationApi->evaluate_cohort: %s\n" % e)
result = str(e)
print("Exception in test_evaluateCohortWithWrongFHIREndpointPort is : " + result)
assert '400' in result, 'Should contain a 400 error due to FHIRClientConnectException with the error message stating: Failed to retrieve the server metadata statement during client initialization.'
def test_evaluateCohortWithMissingValueSet(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = date.today()
request_data = reqdata_path + "CohortEvaluation-with-missing-valueset-request-data.json"
cqldefn = cqldefnzip_path + "EXM130-7.3.000.zip"
try:
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
result = resp.read()
except ApiException as e:
print("Exception when calling CohortEvaluationApi->evaluate_cohort: %s\n" % e)
result = str(e)
print("Exception in test_evaluateCohortWithMissingValueSet is : " + result)
assert '400' in result, 'Should contain 400 error due IllegalArgumentException with the error message stating: Could not resolve value set.'
def test_evaluateCohortWithInvalidAPIVersion2(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = '07-26-2021'
request_data = reqdata_path + "LungCancerScreeningWithSNOMEDcodes-cohort-request-data.json"
cqldefn = cqldefnzip_path + "lung_cancer_screening_with_snomed_codes_v1_0_1.zip"
try:
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
result = resp.read()
except ApiException as e:
print("Exception when calling CohortEvaluationApi->evaluate_cohort: %s\n" % e)
result = str(e)
print("Exception in test_evaluateCohortWithInvalidAPIVersion2 is : " + result)
assert '400' in result, 'Should contain 400 error with message stating: Invalid version parameter value.'
def test_evaluateCohortWithInvalidZipFile(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = date.today()
request_data = reqdata_path + "LungCancerScreeningWithSNOMEDcodes-cohort-request-data.json"
cqldefn = cqldefnzip_path + "EXM130-7.3.000.zip"
try:
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
result = resp.read()
except ApiException as e:
print("Exception when calling CohortEvaluationApi->evaluate_cohort: %s\n" % e)
result = str(e)
print("Exception in test_evaluateCohortWithInvalidZipFile is : " + result)
assert '400' in result, 'Should contain a 400 error with the error message stating: No library source found for the specified cql definition.'
def test_evaluateCohortWithInvalidDefine(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = date.today()
request_data = reqdata_path + "LungCancerScreeningWithSNOMEDcodes-cohort-invalid-define-request-data.json"
cqldefn = cqldefnzip_path + "lung_cancer_screening_with_snomed_codes_v1_0_1.zip"
try:
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
result = resp.read()
except ApiException as e:
print("Exception when calling CohortEvaluationApi->evaluate_cohort: %s\n" % e)
result = str(e)
print("Exception in test_evaluateCohortWithInvalidDefine is : " + result)
assert '400' in result, 'Should contain a 400 error with the error message stating: Could not resolve expression reference <specified define> in library.'
def test_evaluateCohortWithInvalidPatientId(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = date.today()
request_data = reqdata_path + "LungCancerScreeningWithSNOMEDcodes-cohort-invalid-patientId-request-data.json"
cqldefn = cqldefnzip_path + "lung_cancer_screening_with_snomed_codes_v1_0_1.zip"
try:
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
result = resp.read()
except ApiException as e:
print("Exception when calling CohortEvaluationApi->evaluate_cohort: %s\n" % e)
result = str(e)
print("Exception in test_evaluateCohortWithInvalidPatientId is : " + result)
assert '400' in result, 'Should contain a 400 error due to ResourceNotFoundException with the error message stating: HTTP 404 Not Found.'
def test_evaluateCohortWithNonAdherentPatients(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = date.today()
request_data = reqdata_path + "CohortEvaluation-with-nonadherent-patients-request-data.json"
cqldefn = cqldefnzip_path + "EXM130-7.3.000.zip"
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
response = resp.read()
response = response.decode('utf-8')
print("response is : " + str(response))
status = resp.status
print("status from response is : " + str(status))
assert '200' in str(status), 'Should contain 200 and Result should return and empty list.'
expectedResp = '{"result":[]}'
assert expectedResp in response, 'Response should contain ' + expectedResp
def test_evaluateCohortWithMixOfAdherentAndNonAdherentPatients(self):
cohortEvaluationApi = CohortEvaluationApi(swagger_client.ApiClient(self.configuration))
version = date.today()
request_data = reqdata_path + "CohortEvaluation-with-mix-of-adherent-and-nonadherent-patients-request-data.json"
cqldefn = cqldefnzip_path + "EXM130-7.3.000.zip"
resp = cohortEvaluationApi.evaluate_cohort(version, request_data, cqldefn, _preload_content=False)
response = resp.read()
response = response.decode('utf-8')
print("response is : " + str(response))
status = resp.status
print("status from response is : " + str(status))
assert '200' in str(status), 'Should contain 200 and Result should return list of patientIds that are adherent for the evaluated cohort.'
expectedResp = '{"result":["302b80cd-3ef9-e663-db76-e6d397e26381","6be8e7d0-3519-5c6d-8ddb-8ccb55e7df26","a204e84b-a144-fdc5-0db4-f25d813b2cdc","61b2ab7a-22af-c77e-7bf0-6ab3280b22b9"]}'
assert expectedResp in response, 'Response should contain ' + expectedResp