def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_collection_')
self._fn_collection = os.path.join(self._tmp_dir.name, 'test.txt')
self.addCleanup(self._tmp_dir.cleanup)
with open(self._fn_collection, 'w') as file:
for i in range(3):
file.write('{"a": 0}\n')
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='h5store_')
self.addCleanup(self._tmp_dir.cleanup)
self.store = H5StoreManager(prefix=self._tmp_dir.name)
with open(os.path.join(self._tmp_dir.name, 'other_file.txt'),
'w') as file:
file.write(r'blank\n')
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_collection_')
self._fn_json = os.path.join(self._tmp_dir.name, 'test.json')
self.addCleanup(self._tmp_dir.cleanup)
self.c = Collection.open(filename=':memory:')
docs = [dict(_id=str(i)) for i in range(10)]
self.c.update(docs)
self.c.flush()
def test_remove_dryrun(self):
proxy = _FileModifyProxy(dry_run=True)
with TemporaryDirectory(prefix='signac_') as tmp:
fn = os.path.join(tmp, 'test.txt')
self.assertFalse(os.path.isfile(fn))
touch(fn)
self.assertTrue(os.path.isfile(fn))
proxy.remove(fn)
self.assertTrue(os.path.isfile(fn))
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_')
self.addCleanup(self._tmp_dir.cleanup)
self._tmp_pr_a = os.path.join(self._tmp_dir.name, 'pr_a')
self._tmp_pr_b = os.path.join(self._tmp_dir.name, 'pr_b')
os.mkdir(self._tmp_pr_a)
os.mkdir(self._tmp_pr_b)
self.project_a = signac.Project.init_project(name='test-project-a',
root=self._tmp_pr_a)
self.project_b = signac.Project.init_project(name='test-project-b',
root=self._tmp_pr_b)
def test_copy(self):
proxy = _FileModifyProxy()
with TemporaryDirectory(prefix='signac_') as tmp:
fn_src = os.path.join(tmp, 'src.txt')
fn_dst = os.path.join(tmp, 'dst.txt')
touch(fn_src)
self.assertTrue(os.path.isfile(fn_src))
self.assertFalse(os.path.isfile(fn_dst))
proxy.copy(fn_src, fn_dst)
self.assertTrue(os.path.isfile(fn_src))
self.assertTrue(os.path.isfile(fn_dst))
def test_copy_dry_run(self):
proxy = _FileModifyProxy(dry_run=True)
with TemporaryDirectory(prefix='signac_') as tmp:
fn_src = os.path.join(tmp, 'src.txt')
fn_dst = os.path.join(tmp, 'dst.txt')
with open(fn_src, 'w') as file:
file.write('test')
self.assertTrue(os.path.isfile(fn_src))
self.assertFalse(os.path.isfile(fn_dst))
proxy.copy(fn_src, fn_dst)
self.assertTrue(os.path.isfile(fn_src))
self.assertFalse(os.path.isfile(fn_dst))
def setUp(self):
pythonpath = os.environ.get('PYTHONPATH')
if pythonpath is None:
pythonpath = [os.getcwd()]
else:
pythonpath = [os.getcwd()] + pythonpath.split(':')
os.environ['PYTHONPATH'] = ':'.join(pythonpath)
self.tmpdir = TemporaryDirectory(prefix='signac_')
self.addCleanup(self.tmpdir.cleanup)
self.cwd = os.getcwd()
self.addCleanup(self.return_to_cwd)
os.chdir(self.tmpdir.name)
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_')
self.addCleanup(self._tmp_dir.cleanup)
self._tmp_pr = os.path.join(self._tmp_dir.name, 'pr')
self._tmp_wd = os.path.join(self._tmp_dir.name, 'wd')
os.mkdir(self._tmp_pr)
self.config = signac.common.config.load_config()
self.project = self.project_class.init_project(
name='testing_test_project',
root=self._tmp_pr,
workspace=self._tmp_wd)
self.project.config['default_host'] = 'testing'
def test_copytree_dryrun(self):
proxy = _FileModifyProxy(dry_run=True)
with TemporaryDirectory(prefix='signac_') as tmp:
src = os.path.join(tmp, 'src')
dst = os.path.join(tmp, 'dst')
_mkdir_p(src)
fn_src = os.path.join(src, 'test.txt')
fn_dst = os.path.join(dst, 'test.txt')
touch(fn_src)
self.assertTrue(os.path.isfile(fn_src))
self.assertFalse(os.path.isfile(fn_dst))
proxy.copytree(src, dst)
self.assertTrue(os.path.isfile(fn_src))
self.assertFalse(os.path.isfile(fn_dst))
def test_create_backup_dryrun(self):
proxy = _FileModifyProxy(dry_run=True)
with TemporaryDirectory(prefix='signac_') as tmp:
fn = os.path.join(tmp, 'test.txt')
self.assertFalse(os.path.isfile(fn))
with open(fn, 'w') as file:
file.write('a')
self.assertTrue(os.path.isfile(fn))
with proxy.create_backup(fn) as fn_backup:
self.assertFalse(os.path.isfile(fn_backup))
self.assertTrue(os.path.isfile(fn))
self.assertFalse(os.path.isfile(fn_backup))
with self.assertRaises(RuntimeError):
with proxy.create_backup(fn) as fn_backup:
self.assertFalse(os.path.isfile(fn_backup))
with open(fn, 'w') as file:
file.write('b')
raise RuntimeError()
self.assertTrue(os.path.isfile(fn))
self.assertFalse(os.path.isfile(fn_backup))
with open(fn) as file:
self.assertEqual(file.read(), 'b')
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac-flow_')
self.addCleanup(self._tmp_dir.cleanup)
self.project = self.project_class.init_project(name='FlowTestProject',
root=self._tmp_dir.name)
def setUp(self):
MockScheduler.reset()
self._tmp_dir = TemporaryDirectory(prefix='signac-flow_')
self.addCleanup(self._tmp_dir.cleanup)
self.project = FlowProject.init_project(name='FlowTestProject',
root=self._tmp_dir.name)
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_collection_')
self._fn_collection = os.path.join(self._tmp_dir.name, 'test.txt')
self.addCleanup(self._tmp_dir.cleanup)
self.c = Collection.open(self._fn_collection, mode=self.mode)
self.addCleanup(self.c.close)
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_collection_')
self._fn_collection = os.path.join(self._tmp_dir.name, 'test.txt')
self.addCleanup(self._tmp_dir.cleanup)
with Collection.open(self._fn_collection, 'w') as c:
c.update([dict(_id=str(i)) for i in range(10)])
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_')
self.addCleanup(self._tmp_dir.cleanup)
import signac
from signac.errors import Error
from signac.errors import BufferException
from signac.errors import BufferedFileError
from signac.common import six
from test_project import BaseProjectTest
if six.PY2:
from tempdir import TemporaryDirectory
else:
from tempfile import TemporaryDirectory
# Determine if we can run permission error tests
with TemporaryDirectory() as tmp_dir:
path = os.path.join(tmp_dir, 'subdir')
os.mkdir(path)
mode = os.stat(path).st_mode
try:
os.chmod(path, S_IREAD)
with open(os.path.join(path, 'testfile.txt'), 'w') as file:
pass
except OSError:
ABLE_TO_PREVENT_WRITE = True
else:
ABLE_TO_PREVENT_WRITE = False
finally:
os.chmod(path, mode)
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_test_h5store_')
self._fn_store = os.path.join(self._tmp_dir.name, FN_STORE)
self._fn_store_other = os.path.join(self._tmp_dir.name,
'other_' + FN_STORE)
self.addCleanup(self._tmp_dir.cleanup)
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='jsondict_')
self._fn_dict = os.path.join(self._tmp_dir.name, FN_DICT)
self.addCleanup(self._tmp_dir.cleanup)
def setUp(self):
self._tmp_dir = TemporaryDirectory(prefix='signac_')
self.addCleanup(self._tmp_dir.cleanup)
self.doc = JSONDict(
filename=os.path.join(self._tmp_dir.name, 'doc.json'))