import os
import sys
import textwrap
import time
import datetime
import timeloop
# we use this for simple little tasks only
# and don't want engage another logger
timeloop.app.logging.disable(level=9999)
import lipyd.settings as settings
__all__ = ['new_logger', 'Logger']
_log_flush_timeloop = timeloop.Timeloop()
def new_logger(name=None, logdir=None, verbosity=None, **kwargs):
"""
Returns a new logger with default settings (can be customized).
Parameters
----------
name : str
Custom name for the log.
logdir : str
Path to the directoty to store log files.
verbosity : int
Verbosity level, lowest is 0. Messages from levels above this
won't be written to the log..
switchno = 'switch1'
elif "2" in component:
switchno = 'switch2'
if "toggle" in component:
statetype = 'Relay_state'
elif "switch" in component:
statetype = 'Switch_state'
sql = "UPDATE Switch SET {} = {} WHERE SwitchNo = '{}'".format(
statetype, state, switchno)
cursor.execute(sql)
db.commit()
db.close()
tl = timeloop.Timeloop()
@tl.job(interval=timedelta(seconds=1))
def check_switch1_state():
stime = time.time()
i = 0
while time.time() < stime + 0.1:
i += GPIO.input(15)
print(i)
if i > 14:
print("Switch1: ON")
switch1state = 1
else:
print("Switch1: OFF")
switch1state = 0
import pypath.inputs.mirbase as mirbase_input
import pypath.share.common as common
import pypath.share.session as session_mod
import pypath.share.settings as settings
import pypath.share.cache as cache_mod
# method names for ID types
inputs = {
'uniprot': 'all_uniprots',
'swissprot': 'all_swissprots',
'trembl': 'all_trembls',
'mirbase': 'mirbase_mature_all',
'mir-pre': 'mirbase_precursor_all',
}
_reflists_cleanup_timeloop = timeloop.Timeloop()
class ReferenceListManager(session_mod.Logger):
def __init__(self, cleanup_period=10, lifetime=300):
session_mod.Logger.__init__(self, name='reflists')
@_reflists_cleanup_timeloop.job(
interval=datetime.timedelta(seconds=cleanup_period))
def _cleanup():
self._remove_expired()
_reflists_cleanup_timeloop.start(block=False)
For TrEMBL IDs returns False.
"""
return is_uniprot(name, organism=organism, swissprot=True)
def is_trembl(name, organism=9606):
"""
Tells if ``name`` is a TrEMBL ID of ``organism``.
For SwissProt IDs returns False.
"""
return is_uniprot(name, organism=organism, swissprot=False)
_cleanup_timeloop = timeloop.Timeloop()
@_cleanup_timeloop.job(interval=datetime.timedelta(seconds=_cleanup_period))
def _cleanup():
keys = list(globals()['db'].keys())
for key in keys:
if time.time() - globals()['_last_used'][key] > _lifetime:
_remove(key)
_cleanup_timeloop.start(block=False)
import time
import timeloop
import logging
import sys
import dotenv
from modules import telegram, weather
hostname = sys.argv[1]
config = dotenv.dotenv_values("Sunscreen-tuya.env")
logging.basicConfig(
format='%(asctime)s - %(name)s - %(levelname)s - %(message)s',
level=logging.INFO)
background = timeloop.Timeloop()
is_closed = None
@background.job(interval=datetime.timedelta(seconds=5))
def update_device_status():
global is_closed
global hostname
global config
device = tinytuya.CoverDevice(config['DEVICE_ID'], hostname,
config['LOCAL_KEY'])
device.set_version(3.3)
device.set_socketRetryLimit(120)
help='Send data interval in sec')
parser.add_argument('database',
nargs='?',
default='nalog',
type=str,
help='Influx database name')
parser.add_argument(
'cols',
nargs='*',
type=str,
default='time,key,duration,operation,message,status,istatus,report'.split(
","),
help='Comma-separated influx fields')
args = parser.parse_args()
t1 = timeloop.Timeloop()
zabbix_server = "n7701-sys951"
zabbix_host = "n7701-sys420"
home = os.getcwd()
if not os.path.exists(f"{home}/dat"):
os.makedirs(f"{home}/dat")
sender_exe = "D:/zabbix_agent/bin/win64/zabbix_sender.exe"
influx_exe = "D:/influx/influxdb/influx.exe"
text_cols = ",".join([f'"{x}"' for x in args.cols])
query = f'select {text_cols} from autotests ' \
f'where time>now()-{args.interval}s order by time desc'
query = query.replace("\"", "\\\"")
@t1.job(interval=timedelta(seconds=args.interval))
import timeloop
import pypath.utils.mapping as mapping
import pypath.share.common as common
import pypath.internals.intera as intera
import pypath.resources.urls as urls
import pypath.share.curl as curl
import pypath.inputs.uniprot as uniprot_input
import pypath.utils.seq as _se
import pypath.share.session as session_mod
import pypath.utils.taxonomy as taxonomy
import pypath.share.cache as cache_mod
timeloop.app.logging.disable(level=9999)
_homology_cleanup_timeloop = timeloop.Timeloop()
_logger = session_mod.Logger(name='homology')
_log = _logger._log
class HomologyManager(session_mod.Logger):
def __init__(self, cleanup_period=10, lifetime=300):
session_mod.Logger.__init__(self, name='homology')
@_homology_cleanup_timeloop.job(
interval=datetime.timedelta(seconds=cleanup_period))
def _cleanup():
self._remove_expired()
