def complex_to_channels(image, requires_grad=False):
"""Convert data from complex to channels."""
image_out = torch.stack([torch.real(image), torch.imag(image)], axis=-1)
shape_out = torch.cat([torch.shape(image)[:-1], [image.shape[-1] * 2]],
axis=0)
image_out = torch.reshape(image_out, shape_out)
return image_out
def fft2c(im, name="fft2c", do_orthonorm=True):
"""Centered FFT2 on second and third dimensions."""
im_out = im
dims = torch.shape(im_out)
if do_orthonorm:
fftscale = torch.sqrt(
torch.cast(dims[1] * dims[2], dtype=torch.float32))
else:
fftscale = 1.0
fftscale = torch.cast(fftscale, dtype=torch.complex64)
# permute FFT dimensions to be the last (faster!)
tpdims = list(range(len(im_out.get_shape().as_list())))
tpdims[-1], tpdims[1] = tpdims[1], tpdims[-1]
tpdims[-2], tpdims[2] = tpdims[2], tpdims[-2]
im_out = torch.transpose(im_out, tpdims)
im_out = fftshift(im_out, axis=-1)
im_out = fftshift(im_out, axis=-2)
# with torch.device('/gpu:0'):
im_out = torch.fft2d(im_out) / fftscale
im_out = fftshift(im_out, axis=-1)
im_out = fftshift(im_out, axis=-2)
im_out = torch.transpose(im_out, tpdims)
return im_out
def interleave(pt_output, data_format):
if data_format == "channels_last":
output_shape = torch.shape(pt_output)
s = output_shape[3]
realOut = pt_output[:, :, :, 0:s // 2]
imagOut = pt_output[:, :, :, s // 2:s]
pt_output = torch.cat([realOut, imagOut], 2)
pt_output = torch.reshape(pt_output, output_shape)
else:
output_shape = torch.shape(pt_output)
s = output_shape[1]
realOut = pt_output[:, 0:s // 2, :, :]
imagOut = pt_output[:, s // 2:s, :, :]
pt_output = torch.cat([realOut, imagOut], 0)
pt_output = torch.reshape(pt_output, output_shape)
return pt_output
def call(self, q_head, k_head_h, v_head_h, k_head_r, seg_embed, seg_mat,
r_w_bias, r_r_bias, r_s_bias, attn_mask):
# content based attention score
ac = torch.einsum('ibnd,jbnd->ijbn', q_head + r_w_bias, k_head_h)
# position based attention score
bd = torch.einsum('ibnd,jbnd->ijbn', q_head + r_r_bias, k_head_r)
bd = rel_shift(bd, klen=tf.shape(ac)[1])
# segment-based attention score
if seg_mat is None:
ef = 0
else:
ef = torch.einsum('ibnd,snd->isbn', q_head + r_s_bias, seg_embed)
tgt_shape = torch.shape(bd)
ef = torch.where(
torch.Tensor(
np.broadcast_to(torch.expand_dims(seg_mat, 3), tgt_shape)),
torch.Tensor(np.broadcast_to(ef[:, 1:, :, :], tgt_shape)),
torch.Tensor(np.broadcast_to(ef[:, :1, :, :], tgt_shape)))
# merges attention scores and performs masking
attn_score = (ac + bd + ef) * self.scale
if attn_mask is not None:
attn_score = attn_score - 1e30 * attn_mask
# attention probability
attn_prob = functional.softmax(attn_score, 1)
attn_prob = self.attention_probs_dropout(attn_prob)
# attention output
attn_vec = torch.einsum('ijbn,jbnd->ibnd', attn_prob, v_head_h)
def forward(self, inputs):
cfg = self.cfg
x, tgt = inputs
if cfg.brackets:
y = torch.zeros_like(tgt, dtype=torch.floatx())
bs = cfg.brackets + [cfg.num_toks]
b = 0
for i, e in enumerate(bs):
msk = (tgt >= (b or 1)) & (tgt < e)
mt = torch.boolean_mask(tgt, msk) - b
gi = torch.stack([torch.range(torch.shape(mt)[0]), mt])
if i == 0:
logp = torch.log_softmax(self.logits(x, i))
mp = torch.boolean_mask(logp, msk)
u = torch.gather_nd(mp, gi)
else:
mp = torch.boolean_mask(logp, msk)
u = mp[:, bs[i - 1]]
mc = torch.boolean_mask(x, msk)[None]
mp = torch.log_softmax(self.logits(mc, i))
mp = torch.squeeze(mp, 0)
u += torch.gather_nd(mp, gi)
y = torch.tensor_scatter_nd_add(y, torch.where(msk), -u)
b = e
else:
y = self.logits(x)
# f = torch.SparseCategoricalAccuracy
# self.add_metric(f(name='acc')(tgt, y))
f = torch.sparse_softmax_cross_entropy_with_logits
loss = f(labels=tgt, logits=y)
# self.add_loss(lambda: torch.reduce_mean(loss))
return y
def batch_flatten(x):
"""
Flatten the tensor except the first dimension.
"""
shape = x.shape[1:]
if None not in shape:
return torch.reshape(x, [-1, int(np.prod(shape))])
return torch.reshape(x, torch.stack([torch.shape(x)[0], -1]))
def channels_to_complex(image, requires_grad=False):
"""Convert data from channels to complex."""
image_out = torch.reshape(image, [-1, 2])
image_out = torch.tensor(image_out[:, 0],
image_out[:, 1],
dtype=torch.cfloat)
shape_out = torch.cat([torch.shape(image)[:-1], [image.shape[-1] // 2]],
axis=0)
image_out = torch.reshape(image_out, shape_out)
return image_out
def forward(self, t_img1, t_img2):
t_pyr1 = self.make_laplacian_pyramid(t_img1, self.max_levels)
t_pyr2 = self.make_laplacian_pyramid(t_img2, self.max_levels)
t_losses = [
torch.norm(a - b, ord=1) / torch.size(a, out_type=torch.float32)
for a, b in zip(t_pyr1, t_pyr2)
]
t_loss = torch.sum(t_losses) * torch.shape(t_img1,
out_type=torch.float32)[0]
return t_loss
def get_data_shape(self):
"""
Gets array shape of datapoints in this dataset.
"""
if not len(self.metadata_df):
raise ValueError("No data in dataset.")
sample_X = load_from_disk(
os.path.join(self.data_dir,
next(self.metadata_df.iterrows())[1]['X']))
return torch.shape(sample_X)[1:]
def mmd2_rbf(X, t, p, sig):
""" Computes the l2-RBF MMD for X given t """
X = X.squeeze(0)
it = torch.where(t > 0)[1]
ic = torch.where(t < 1)[1]
Xc = torch.index_select(X, 1, ic)
Xt = torch.index_select(X, 1, it)
Kcc = torch.exp(-pdist2sq(Xc, Xc) / np.square(sig))
Kct = torch.exp(-pdist2sq(Xc, Xt) / np.square(sig))
Ktt = torch.exp(-pdist2sq(Xt, Xt) / np.square(sig))
m = torch.float(torch.shape(Xc)[0])
n = torch.float(torch.shape(Xt)[0])
mmd = torch.square(1.0 - p) / (m * (m - 1.0)) * (torch.sum(Kcc) - m)
mmd = mmd + torch.square(p) / (n * (n - 1.0)) * (torch.sum(Ktt) - n)
mmd = mmd - 2.0 * p * (1.0 - p) / (m * n) * torch.sum(Kct)
mmd = 4.0 * mmd
return mmd
def lookup(self, x, i):
t = self.weights[i]
if self.one_hot:
y = torch.one_hot(x, torch.shape(t)[0], axis=-1)
y = torch.einsum("np,in->ip", t, y)
else:
cfg = self.cfg
y = F.embedding(x, t, cfg.PAD, cfg.max_norm, cfg.norm_type,
cfg.scale_grad, cfg.sparse)
a = self.adjusts[i]
if a is not None:
y = torch.einsum("ip,ph->ih", y, a)
return y
def get_features(self, x):
x_has_timesteps = (len(x.shape) == 5)
if x_has_timesteps:
sh = torch.shape(x)
x = flatten_two_dims(x)
x = (x - self.ob_mean) / self.ob_std
x = np.transpose(x, [i for i in range(len(x.shape) - 3)] +
[-1, -3, -2]) # [N, H, W, C] --> [N, C, H, W]
x = self.features_model(torch.tensor(x))
if x_has_timesteps:
x = unflatten_first_dim(x, sh)
return x
def _build_likelihood(self):
L = th.cumsum(self.E_log_p_Y(self.X, self.Y))[:]
KL = th.cumsum([layer.KL() for layer in self.layers])[:]
scale = th.cumsum(self.num_data, float_type)
scale /= th.cast(th.shape(self.X)[0], float_type) # minibatch size
return L * scale - KL
def call(self, inputs):
"""Implements call() for the layer."""
inp_k = inputs['inp_k']
seg_id = inputs['seg_id']
input_mask = inputs['input_mask']
mems = inputs['mems']
perm_mask = inputs['perm_mask']
target_mapping = inputs['target_mapping']
inp_q = inputs['inp_q']
new_mems = []
bsz = torch.shape(inp_k)[1]
qlen = inp_k.shape.as_list()[0]
mlen = mems[0].shape.as_list()[0] if mems is not None else 0
klen = mlen + qlen
##### Attention mask
# causal attention mask
if self.attn_type == 'uni':
attn_mask = _create_mask(qlen, mlen, self.tf_float,
self.same_length)
# pylint: enable=protected-access
attn_mask = attn_mask[:, :, None, None]
elif self.attn_type == 'bi':
attn_mask = None
else:
raise ValueError('Unsupported attention type: {}'.format(
self.attn_type))
# data mask: input mask & perm mask
if input_mask is not None and perm_mask is not None:
data_mask = input_mask[None] + perm_mask
elif input_mask is not None and perm_mask is None:
data_mask = input_mask[None]
elif input_mask is None and perm_mask is not None:
data_mask = perm_mask
else:
data_mask = None
if data_mask is not None:
# all mems can be attended to
mems_mask = torch.zeros([tf.shape(data_mask)[0], mlen, bsz],
dtype=self.tf_float)
data_mask = torch.cat([mems_mask, data_mask], 1)
if attn_mask is None:
attn_mask = data_mask[:, :, :, None]
else:
attn_mask += data_mask[:, :, :, None]
if attn_mask is not None:
attn_mask = torch.cast(attn_mask > 0, dtype=self.tf_float)
if attn_mask is not None:
non_tgt_mask = -torch.eye(qlen, dtype=self.tf_float)
non_tgt_mask = torch.cat(
[tf.zeros([qlen, mlen], dtype=self.tf_float), non_tgt_mask],
axis=-1)
non_tgt_mask = torch.cast(
(attn_mask + non_tgt_mask[:, :, None, None]) > 0,
dtype=self.tf_float)
else:
non_tgt_mask = None
word_emb_k = self.embedding_lookup(inp_k)
if inp_q is not None:
if target_mapping is not None:
word_emb_q = torch.tile(self.mask_emb,
[tf.shape(target_mapping)[0], bsz, 1])
else:
inp_q_ext = inp_q[:, :, None]
word_emb_q = inp_q_ext * self.mask_emb + (
1 - inp_q_ext) * word_emb_k
output_h = self.h_dropout(word_emb_k)
output_g = None
if inp_q is not None:
output_g = self.g_dropout(word_emb_q)
##### Segment embedding
if seg_id is not None:
# Convert `seg_id` to one-hot `seg_mat`
mem_pad = torch.zeros([mlen, bsz], dtype=tf.int32)
cat_id = torch.concat([mem_pad, seg_id], 0)
if self.use_cls_mask:
# `1` indicates not in the same segment [qlen x klen x bsz]
# seg_id: [qlen x bsz] & cat_id: [klen x bsz]
cls_mat = torch.logical_or(
torch.equal(seg_id,
tf.constant([data_utils.SEG_ID_CLS]))[:, None],
torch.equal(cat_id,
tf.constant([data_utils.SEG_ID_CLS]))[None, :])
seg_mat = torch.equal(seg_id[:, None], cat_id[None, :])
seg_mat = torch.logical_or(cls_mat, seg_mat)
else:
seg_mat = tf.logical_not(
tf.equal(seg_id[:, None], cat_id[None, :]))
else:
seg_mat = None
dtype = self.tf_float
freq_seq = tf.range(0, self.d_model, 2.0)
if dtype is not None and dtype != tf.float32:
freq_seq = tf.cast(freq_seq, dtype=self.dtype)
if self.attn_type == 'bi':
beg, end = klen, -qlen
elif self.attn_type == 'uni':
beg, end = klen, -1
else:
raise ValueError('Unknown `attn_type` {}.'.format(self.attn_type))
if self.bi_data:
fwd_pos_seq = torch.range(beg, end, -1.0)
bwd_pos_seq = torch.range(-beg, -end, 1.0)
if dtype is not None and dtype != tf.float32:
fwd_pos_seq = torch.cast(fwd_pos_seq, dtype=dtype)
bwd_pos_seq = torxh.cast(bwd_pos_seq, dtype=dtype)
if self.clamp_len > 0:
fwd_pos_seq = torch.clip_by_value(fwd_pos_seq, -self.clamp_len,
self.clamp_len)
bwd_pos_seq = torch.clip_by_value(bwd_pos_seq, -self.clamp_len,
self.clamp_len)
if bsz is not None:
fwd_pos_emb = self.fwd_position_embedding(
fwd_pos_seq, bsz // 2)
bwd_pos_emb = self.bwd_position_embedding(
bwd_pos_seq, bsz // 2)
else:
fwd_pos_emb = self.fwd_position_embedding(fwd_pos_seq, None)
bwd_pos_emb = self.bwd_position_embedding(bwd_pos_seq, None)
pos_emb = tf.concat([fwd_pos_emb, bwd_pos_emb], axis=1)
else:
fwd_pos_seq = tf.range(beg, end, -1.0)
if dtype is not None and dtype != tf.float32:
fwd_pos_seq = tf.cast(fwd_pos_seq, dtype=dtype)
if self.clamp_len > 0:
fwd_pos_seq = tf.clip_by_value(fwd_pos_seq, -self.clamp_len,
self.lamp_len)
pos_emb = self.fwd_position_embedding(fwd_pos_seq, bsz)
pos_emb = self.emb_dropout(pos_emb)
if mems is None:
mems = [None] * self.n_layer
for i in range(self.n_layer):
# cache new mems
new_mems.append(
_cache_mem(output_h, mems[i], self.mem_len, self.reuse_len))
# pylint: enable=protected-access
# segment bias
if seg_id is None:
r_s_bias_i = None
seg_embed_i = None
else:
r_s_bias_i = self.r_s_bias if not self.untie_r else self.r_s_bias[
i]
seg_embed_i = self.seg_embed[i]
ffn_layer = self.h_positionwise_ffn_layers[i]
attention_layer = self.rel_multihead_layers[i]
output_h, output_g = attention_layer(
h=output_h,
g=output_g,
r=pos_emb,
r_w_bias=self.r_w_bias
if not self.untie_r else self.r_w_bias[i],
r_r_bias=self.r_r_bias
if not self.untie_r else self.r_r_bias[i],
seg_mat=seg_mat,
r_s_bias=r_s_bias_i,
seg_embed=seg_embed_i,
attn_mask_h=non_tgt_mask,
attn_mask_g=attn_mask,
mems=mems[i],
target_mapping=target_mapping)
output_h = ffn_layer(output_h)
if output_g is not None:
output_g = ffn_layer(output_g)
if inp_q is not None:
output = output_g
else:
output = output_h
return output
def auc_degredation_measure(model, x, sal):
# Compute the auc measure of the performance drop using the saliency map
D = torch.shape(sal)