def download_dandiset_assets(dandiset_id="000037",
version="draft",
output=".",
incl_stim_templates=False,
incl_full_stacks=False,
sess_ns="all",
mouse_ns="all",
excluded_sess=True,
mouse_df=DEFAULT_MOUSE_DF_PATH,
log_level="info"):
logger_util.format_all(level=log_level)
dandiset_id = f"{int(dandiset_id):06}" # ensure correct ID formatting
asset_sessids = "all"
if sess_ns not in ["all", "any"] or mouse_ns not in ["all", "any"]:
if dandiset_id != "000037":
raise NotImplementedError(
"Selecting assets based on session and mouse numbers is only "
"implemented for dandiset 000037.")
sess_ns = reformat_n(sess_ns)
mouse_ns = reformat_n(mouse_ns)
pass_fail = "all" if excluded_sess else "P"
asset_sessids = sess_gen_util.get_sess_vals(mouse_df,
"dandi_session_id",
mouse_n=mouse_ns,
sess_n=sess_ns,
runtype="prod",
pass_fail=pass_fail,
incl="all",
sort=True)
logger.info("Identifying the URLs of dandi assets to download...")
dandiset_urls = get_dandiset_asset_urls(
dandiset_id,
version=version,
asset_sessids=asset_sessids,
incl_stim_templates=incl_stim_templates,
incl_full_stacks=incl_full_stacks)
logger.info(f"Downloading {len(dandiset_urls)} assets from "
f"dandiset {dandiset_id}...")
for dandiset_url in dandiset_urls:
dandi_download.download(dandiset_url, output, existing="refresh")
action="store_true",
help="create a datetime folder")
parser.add_argument("--overwrite",
action="store_true",
help="allow overwriting")
parser.add_argument("--not_save_fig",
action="store_true",
help="don't save figures")
parser.add_argument("--no_sharey",
action="store_true",
help="don't share y axis")
# plot using modif_analys_plots (if plotting from dictionary)
parser.add_argument(
"--modif",
action="store_true",
help=("plot from dictionary using modified plot functions"))
args = parser.parse_args()
return args
#############################################
if __name__ == "__main__":
args = parse_args()
logger_util.format_all(level=args.log_level)
main(args)
