def run_job(credential, gjfstring, jobstring=None, **kwargs):
results = {
"jobid": None,
"error": None,
}
try:
results["cluster"] = credential.cluster.name
if not credential.user.is_staff:
results["error"] = "You must be a staff user to submit a job."
return results
ssh = get_ssh_connection_obj(credential)
sftp = get_sftp_connection_obj(credential)
except:
results["error"] = "Invalid credential"
results["cluster"] = None
logger.info("Invalid credential %s" % credential)
return results
with ssh, sftp:
jobid, error = _run_job(ssh, sftp, gjfstring, jobstring, **kwargs)
results["jobid"] = jobid
results["error"] = error
if not error:
job = Job(credential=credential, jobid=jobid, **kwargs)
job.save()
return results
def run_job(credential, gjfstring, jobstring=None, **kwargs):
results = {
"jobid": None,
"error": None,
}
try:
results["cluster"] = credential.cluster.name
if not credential.user.is_staff:
results["error"] = "You must be a staff user to submit a job."
return results
ssh = get_ssh_connection_obj(credential)
sftp = get_sftp_connection_obj(credential)
except:
results["error"] = "Invalid credential"
results["cluster"] = None
logger.info("Invalid credential %s" % credential)
return results
with ssh, sftp:
jobid, error = _run_job(ssh, sftp, gjfstring, jobstring, **kwargs)
results["jobid"] = jobid
results["error"] = error
if not error:
job = Job(
credential=credential,
jobid=jobid,
**kwargs
)
job.save()
return results
def run_jobs(credential, names, gjfstrings, jobstring=None, **kwargs):
results = {
"worked": [],
"failed": [],
"error": None,
}
try:
results["cluster"] = credential.cluster.name
if not credential.user.is_staff:
results["error"] = "You must be a staff user to submit a job."
return results
ssh = get_ssh_connection_obj(credential)
sftp = get_sftp_connection_obj(credential)
except:
results["error"] = "Invalid credential"
results["cluster"] = None
logger.info("Invalid credential %s" % credential)
return results
jobs = []
with ssh, sftp:
for name, gjf in zip(names, gjfstrings):
dnew = kwargs.copy()
dnew["name"] = re.sub(
r"{{\s*name\s*}}", name, dnew.get("name", "{{ name }}"))
jobid, error = _run_job(ssh, sftp, gjf, jobstring, **dnew)
if error is None:
results["worked"].append((name, jobid))
job = Job(
credential=credential,
molecule=name,
jobid=jobid,
**dnew
)
jobs.append(job)
else:
results["failed"].append((name, error))
Job.objects.bulk_create(jobs)
return results
def run_jobs(credential, names, gjfstrings, jobstring=None, **kwargs):
results = {
"worked": [],
"failed": [],
"error": None,
}
try:
results["cluster"] = credential.cluster.name
if not credential.user.is_staff:
results["error"] = "You must be a staff user to submit a job."
return results
ssh = get_ssh_connection_obj(credential)
sftp = get_sftp_connection_obj(credential)
except:
results["error"] = "Invalid credential"
results["cluster"] = None
logger.info("Invalid credential %s" % credential)
return results
jobs = []
with ssh, sftp:
for name, gjf in zip(names, gjfstrings):
dnew = kwargs.copy()
dnew["name"] = re.sub(r"{{\s*name\s*}}", name,
dnew.get("name", "{{ name }}"))
jobid, error = _run_job(ssh, sftp, gjf, jobstring, **dnew)
if error is None:
results["worked"].append((name, jobid))
job = Job(credential=credential,
molecule=name,
jobid=jobid,
**dnew)
jobs.append(job)
else:
results["failed"].append((name, error))
Job.objects.bulk_create(jobs)
return results