str_xordFile = '%s.xord' % str_stem
str_yordFile = '%s.yord' % str_stem
# We need to setup the grid with the proper size, which
# is a slight chicken-and-egg problem. First, we read
# one of the ord files, determine the string length
# and there we go :-)
if not count:
f = open(str_xordFile)
str_file = f.readline()
str_xord = str_file.splitlines()[0]
gridSize = len(str_xord)
l_keys = list(str_xord)
l_keys.sort()
f.close()
gridSpect = spectrum.C_spectrum(l_keys)
Cg = grid.C_ggrid(str_gridFile, gridSpect)
print Cg
if not count:
Cg_sum = Cg
Csp_xord = spectrum.C_spectrum_permutation(Cg_sum.cols_get())
Csp_xord.printAsHistogram_set(True)
Csp_xord.name_set('X-ordering')
Csp_yord = spectrum.C_spectrum_permutation(Cg_sum.cols_get())
Csp_yord.printAsHistogram_set(True)
Csp_yord.name_set('Y-ordering')
Csp_xyord = spectrum.C_spectrum_permutation2D(Cg_sum.cols_get())
Csp_xyord.printAsHistogram_set(True)
Csp_xyord.name_set('XY-ordering')
Csp_xyord.printConcise_set(True)
else:
#
# A simple 'driver' for a C_genome class instance
#
# HISTORY
#
# 25 March 2011
# o Initial development implementation.
#
from numpy import *
from C_spectrum import *
C_t = C_spectrum_color(['r', 'g', 'b', 'y'])
C_t.component_add('b')
C_s = C_spectrum(['1', '2', '3'])
print C_s
a = array((1, 1, 1, 2, 5, 10, 5, 2, 1, 1, 1))
C_sa = C_spectrum(a)
C_sa.component_add(2)
print C_sa.arr_get()
C_sp = C_spectrum_color()
C_sp.component_add('red')
C_sp.component_add('red')
C_sp.component_add(2)
C_sp.component_add(0)
C_sp2a = C_spectrum_color((4, ))
C_sp2b = C_spectrum_color((1, ))
# DESCRIPTION
#
# A simple 'driver' for a C_genome class instance
#
# HISTORY
#
# 07 December 2011
# o Initial development implementation.
#
from numpy import *
from C_ggrid import *
from C_spectrum import *
import copy
Csp = C_spectrum(['R', 'G', 'B']);
Csp.component_add('R');
Csp.component_add('G');
Csp.component_add('B');
print Csp
Cg0 = C_ggrid(2, Csp, name='Cg0');
Cg1 = C_ggrid(np.array((2,2)), Csp, name='Cg1')
Cg00 = copy.deepcopy(Cg0) ; Cg00.mstr_name = 'Cg00'
print Cg0
print Cg00
Cg2 = Cg0 + Cg1
print Cg2
#
# 25 March 2011
# o Initial development implementation.
#
from numpy import *
from C_spectrum import *
C_t = C_spectrum_color(['r', 'g', 'b', 'y'])
C_t.component_add('b')
C_s = C_spectrum(['1', '2', '3'])
print C_s
a = array( (1, 1, 1, 2, 5, 10, 5, 2, 1, 1, 1))
C_sa = C_spectrum(a)
C_sa.component_add(2)
print C_sa.arr_get()
C_sp = C_spectrum_color()
C_sp.component_add('red')
C_sp.component_add('red')
C_sp.component_add(2)
C_sp.component_add(0)
C_sp2a = C_spectrum_color((4,))
C_sp2b = C_spectrum_color((1,))
C_spA = C_sp2a + C_sp2a + C_sp2a + C_sp2a + C_sp2a + C_sp2b + C_sp2b
#C_spA.printConcise_set(True)
C_spA.printAsRow_set(True)
print C_spA
