Python GetAnnotationsRemoveExtraneousInfo.setAnnotationLookUpTable Examples

Example #1

def buildSingleCell(SKID):

    aCell = GFinputNeuron(SKID)

    #sets annotations based on SKID
    aCell.annotations = GetAnnotationsRemoveExtraneousInfo.setAnnotationLookUpTable(
        SKID)

    aCell.neuronName = GetAnnotationsRemoveExtraneousInfo.getName(SKID)

    aCell.GF1synapseCount = 0

    return aCell

Example #2

def buildSingleCellLC6partners(SKID):
    aCell = GFinputNeuron(SKID)

    # sets annotations based on SKID
    aCell.annotations = GetAnnotationsRemoveExtraneousInfo.setAnnotationLookUpTable(
        SKID)

    aCell.neuronName = GetAnnotationsRemoveExtraneousInfo.getName(SKID)

    aCell.GF1synapseCount = 0

    for i in aCell.annotations:
        if 'cluster' in i:
            aCell.classification = i
    return aCell