Python SedmlToRr Examples

Example #1

File: ipythonify.py Project: kirichoi/flask-ipython-redirect

def sedmlconv(zipextloc):
    sbmlloc, sedmlloc = manifestsearch(zipextloc)
    sedmlantimony = se.sedml_to_python(zipextloc + sedmlloc)
    return sedmlantimony

Example #2

File: ipythonify.py Project: stanleygu/flask-ipython-redirect

def sedmlconv(zipextloc):  #sedml conversion
    sbmlloc, sedmlloc = manifestsearch(zipextloc)
    sedml = se.sedml_to_python(zipextloc + sedmlloc)
    return sedml

Example #3

File: test.py Project: kirichoi/sedml2py

import SedmlToRr as s2p

#execfile("C:/TEMP/app2simworking.py");
#ret = s2p.sedml_to_python("C:/TEMP/app2sim/app2sim.sedml")
ret = s2p.sedml_to_python("C:/TEMP/asedmlComplex/asedmlComplex.sedml")
#ret = s2p.sedml_to_python("C:/TEMP/asedml3repeat/asedml3repeat.sedml")
#execfile("C:/TEMP/asedml3repeat/asedml3repeat.py")
#ret = s2p.sedml_to_python("C:/TEMP/app2sim.sedx")
#ret = s2p.sedml_to_python("C:/TEMP/BioModel1.sedml")
exec ret

Example #4

File: test.py Project: kirichoi/sedml2py

import SedmlToRr as s2p

# execfile("C:/TEMP/app2simworking.py");
# ret = s2p.sedml_to_python("C:/TEMP/app2sim/app2sim.sedml")
ret = s2p.sedml_to_python("C:/TEMP/asedmlComplex/asedmlComplex.sedml")
# ret = s2p.sedml_to_python("C:/TEMP/asedml3repeat/asedml3repeat.sedml")
# execfile("C:/TEMP/asedml3repeat/asedml3repeat.py")
# ret = s2p.sedml_to_python("C:/TEMP/app2sim.sedx")
# ret = s2p.sedml_to_python("C:/TEMP/BioModel1.sedml")
exec ret

Example #5

File: ipythonify.py Project: stanleygu/flask-ipython-redirect

def sedmlconv(zipextloc):    #sedml conversion
    sbmlloc, sedmlloc = manifestsearch(zipextloc)
    sedml = se.sedml_to_python(zipextloc + sedmlloc)
    return sedml

Example #6

def sedmlconv(zipextloc):
    sbmlloc, sedmlloc = manifestsearch(zipextloc)
    sedmlantimony = se.sedml_to_python(zipextloc + sedmlloc)
    return sedmlantimony