Python Analysis.print_that Examples

Example #1

File: test_Restriction.py Project: wanliu2019/biopython

 def test_print_that(self):
     """Test print_that function."""
     out = self.StringIO()
     self.sys.stdout = out
     my_batch = EcoRI + SmaI + KpnI
     my_seq = Seq("GAATTCCCGGGATATA")  # EcoRI and SmaI sites
     analysis = Analysis(my_batch, my_seq)
     analysis.print_that(None, title="My sequence\n\n", s1="Non Cutters\n\n")
     self.assertIn("My sequence", out.getvalue())
     self.assertIn("Non Cutters", out.getvalue())
     self.assertIn("2.", out.getvalue())
     self.sys.stdout = self.sys.__stdout__

Example #2

File: test_Restriction.py Project: ezequieljsosa/biopython

 def test_print_that(self):
     """Test print_that function."""
     out = self.StringIO()
     self.sys.stdout = out
     my_batch = EcoRI + SmaI + KpnI
     my_seq = Seq('GAATTCCCGGGATATA')  # EcoRI and SmaI sites
     analysis = Analysis(my_batch, my_seq)
     analysis.print_that(None, title='My sequence\n\n',
                         s1='Non Cutters\n\n')
     self.assertIn('My sequence', out.getvalue())
     self.assertIn('Non Cutters', out.getvalue())
     self.assertIn('2.', out.getvalue())
     self.sys.stdout = self.sys.__stdout__

Example #3

 def test_print_that(self):
     """Test print_that function."""
     out = self.StringIO()
     self.sys.stdout = out
     my_batch = EcoRI + SmaI + KpnI
     my_seq = Seq('GAATTCCCGGGATATA')  # EcoRI and SmaI sites
     analysis = Analysis(my_batch, my_seq)
     analysis.print_that(None, title='My sequence\n\n',
                         s1='Non Cutters\n\n')
     self.assertIn('My sequence', out.getvalue())
     self.assertIn('Non Cutters', out.getvalue())
     self.assertIn('2.', out.getvalue())
     self.sys.stdout = self.sys.__stdout__