def test_Alignment_assertions(self):
a = psw.Alignment()
self.assertRaises(AssertionError, a.append, psw.ColumnUnit(1, 200, "SEQUENCE"))
a.append(psw.ColumnUnit(0, 98, "SEQUENCE"))
self.assertRaises(AssertionError, a.append, psw.ColumnUnit(0, 200, "SEQUENCE"))
a.append(psw.ColumnUnit(1, 200, "SEQUENCE"))
self.assertRaises(AssertionError, a.append, psw.ColumnUnit(1, 200, "SEQUENCE"))
def test_Alignment_normal(self):
a = psw.Alignment()
a.append(psw.ColumnUnit(0, 98, "SEQUENCE"))
a.append(psw.ColumnUnit(1, 200, "SEQUENCE"))
a.append(psw.ColumnUnit(0, 98, "INSERT"))
a.append(psw.ColumnUnit(1, 201, "SEQUENCE"))
a.append(psw.ColumnUnit(0, 98, "END"))
a.append(psw.ColumnUnit(1, 201, "END"))
self.assertEqual(str(a), "[SEQUENCE(98, 200), INSERT(98, 201), END(98, 201)]")
