def rescheduleFailedJob(jobID, message):
try:
import DIRAC
global jobReport
gLogger.warn('Failure during %s' % (message))
#Setting a job parameter does not help since the job will be rescheduled,
#instead set the status with the cause and then another status showing the
#reschedule operation.
if not jobReport:
gLogger.info('Creating a new JobReport Object')
jobReport = JobReport(int(jobID), 'JobWrapperTemplate')
jobReport.setApplicationStatus('Failed %s ' % message, sendFlag=False)
jobReport.setJobStatus('Rescheduled', message, sendFlag=False)
# We must send Job States and Parameters before it gets reschedule
jobReport.sendStoredStatusInfo()
jobReport.sendStoredJobParameters()
gLogger.info(
'Job will be rescheduled after exception during execution of the JobWrapper'
)
jobManager = RPCClient('WorkloadManagement/JobManager')
result = jobManager.rescheduleJob(int(jobID))
if not result['OK']:
gLogger.warn(result)
# Send mail to debug errors
mailAddress = DIRAC.alarmMail
site = DIRAC.siteName()
subject = 'Job rescheduled at %s' % site
ret = systemCall(0, 'hostname')
wn = ret['Value'][1]
msg = 'Job %s rescheduled at %s, wn=%s\n' % (jobID, site, wn)
msg += message
NotificationClient().sendMail(mailAddress,
subject,
msg,
fromAddress="*****@*****.**",
localAttempt=False)
return
except Exception, x:
gLogger.exception('JobWrapperTemplate failed to reschedule Job')
return
def rescheduleFailedJob(jobID,message):
try:
import DIRAC
global jobReport
gLogger.warn('Failure during %s' %(message))
#Setting a job parameter does not help since the job will be rescheduled,
#instead set the status with the cause and then another status showing the
#reschedule operation.
if not jobReport:
gLogger.info('Creating a new JobReport Object')
jobReport = JobReport(int(jobID),'JobWrapperTemplate')
jobReport.setApplicationStatus( 'Failed %s ' % message, sendFlag = False )
jobReport.setJobStatus( 'Rescheduled', message, sendFlag = False )
# We must send Job States and Parameters before it gets reschedule
jobReport.sendStoredStatusInfo()
jobReport.sendStoredJobParameters()
gLogger.info('Job will be rescheduled after exception during execution of the JobWrapper')
jobManager = RPCClient('WorkloadManagement/JobManager')
result = jobManager.rescheduleJob(int(jobID))
if not result['OK']:
gLogger.warn(result)
# Send mail to debug errors
mailAddress = DIRAC.alarmMail
site = DIRAC.siteName()
subject = 'Job rescheduled at %s' % site
ret = systemCall(0,'hostname')
wn = ret['Value'][1]
msg = 'Job %s rescheduled at %s, wn=%s\n' % ( jobID, site, wn )
msg += message
NotificationClient().sendMail(mailAddress,subject,msg,fromAddress="*****@*****.**",localAttempt=False)
return
except Exception,x:
gLogger.exception('JobWrapperTemplate failed to reschedule Job')
return
def execute_module(ed, executable, args):
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
DIRAC.gLogger.notice('Executable:', executable)
DIRAC.gLogger.notice('Arguments:', args)
ed.edExe = executable
ed.edArguments = args
evnDisplayReturnCode = ed.execute()
if evnDisplayReturnCode != 0:
DIRAC.gLogger.error('Failed to execute EvnDisp Application')
jobReport.setApplicationStatus('EvnDisp Application: Failed')
DIRAC.exit(-1)
return DIRAC.S_OK
def main():
from DIRAC.Core.Base import Script
Script.registerSwitch("T:", "template=", "Corsika Template")
Script.registerSwitch("S:", "simtelConfig=", "SimtelConfig")
Script.registerSwitch("p:", "run_number=",
"Do not use: Run Number automatically set")
Script.registerSwitch("E:", "executable=",
"Executable (Use SetExecutable)")
Script.registerSwitch("V:", "version=", "Version (Use setVersion)")
Script.registerSwitch("M:", "mode=",
"Mode (corsika_standalone/corsika_simtelarray)")
Script.parseCommandLine(ignoreErrors=True)
## default values ##############
run_number = None
corsikaTemplate = None
simtelConfig = None
executable = None
version = None
mode = 'corsika_simtelarray'
### set switch values ###
for switch in Script.getUnprocessedSwitches():
if switch[0] == "run_number" or switch[0] == "p":
run_number = switch[1].split('ParametricParameters=')[1]
elif switch[0] == "template" or switch[0] == "T":
corsikaTemplate = switch[1]
elif switch[0] == "simtelConfig" or switch[0] == "S":
simtelConfig = switch[1]
elif switch[0] == "executable" or switch[0] == "E":
executable = switch[1]
elif switch[0] == "version" or switch[0] == "V":
version = switch[1]
elif switch[0] == "mode" or switch[0] == "M":
mode = switch[1]
if version == None or executable == None or run_number == None or corsikaTemplate == None:
Script.showHelp()
jobReport.setApplicationStatus('Missing options')
DIRAC.exit(-1)
from CTADIRAC.Core.Workflow.Modules.CorsikaApp import CorsikaApp
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
createGlobalsFromConfigFiles(corsikaTemplate, version)
############ Producing Corsika File
install_CorsikaSimtelPack(version)
CorsikaSimtelPack = 'corsika_simhessarray/' + version + '/corsika_simhessarray'
cs = CorsikaApp()
cs.setSoftwarePackage(CorsikaSimtelPack)
cs.csExe = executable
cs.csArguments = [
'--run-number', run_number, '--run', 'corsika', corsikaTemplate
]
corsikaReturnCode = cs.execute()
if corsikaReturnCode != 0:
DIRAC.gLogger.error('Corsika Application: Failed')
jobReport.setApplicationStatus('Corsika Application: Failed')
DIRAC.exit(-1)
###################### rename of corsika output file #######################
rundir = 'run' + run_number
filein = rundir + '/' + corsikaOutputFileName
corsikaFileName = particle + '_' + thetaP + '_' + phiP + '_alt' + obslev + '_' + 'run' + run_number + '.corsika.gz'
mv_cmd = 'mv ' + filein + ' ' + corsikaFileName
if (os.system(mv_cmd)):
DIRAC.exit(-1)
### create corsika tar luisa ####################
corsikaTarName = particle + '_' + thetaP + '_' + phiP + '_alt' + obslev + '_' + 'run' + run_number + '.corsika.tar.gz'
filetar1 = rundir + '/' + 'input'
filetar2 = rundir + '/' + 'DAT' + run_number + '.dbase'
filetar3 = rundir + '/run' + str(int(run_number)) + '.log'
cmdTuple = [
'/bin/tar', 'zcf', corsikaTarName, filetar1, filetar2, filetar3
]
DIRAC.gLogger.notice('Executing command tuple:', cmdTuple)
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute tar')
DIRAC.exit(-1)
if (mode == 'corsika_standalone'):
DIRAC.exit()
############ Producing SimTel File
######################Building simtel Directory Metadata #######################
cfg_dict = {
"4MSST": 'cta-prod2-4m-dc',
"SCSST": 'cta-prod2-sc-sst',
"STD": 'cta-prod2',
"NSBX3": 'cta-prod2',
"ASTRI": 'cta-prod2-astri',
"NORTH": 'cta-prod2n',
"SCMST": 'cta-prod2-sc3'
}
#if simtelConfig=="6INROW":
# all_configs=["4MSST","SCSST","ASTRI","NSBX3","STD","SCMST"]
#elif simtelConfig=="5INROW":
# all_configs=["4MSST","SCSST","ASTRI","NSBX3","STD"]
#else:
# all_configs=[simtelConfig]
all_configs = [simtelConfig]
for current_conf in all_configs:
DIRAC.gLogger.notice('current conf is', current_conf)
current_version = version
DIRAC.gLogger.notice('current version is', current_version)
#if current_conf == "SCMST":
# current_version = version + '_sc3'
# DIRAC.gLogger.notice('current version is', current_version)
# if os.path.isdir('sim_telarray'):
# DIRAC.gLogger.notice('Package found in the local area. Removing package...')
# cmd = 'rm -R sim_telarray corsika-6990 hessioxxx corsika-run'
# if(os.system(cmd)):
# DIRAC.exit( -1 )
# install_CorsikaSimtelPack(current_version)
#else:
# current_version = version
# DIRAC.gLogger.notice('current version is', current_version)
#### execute simtelarray ################
fd = open('run_sim.sh', 'w')
fd.write("""#! /bin/sh
export SVNPROD2=$PWD
export SVNTAG=SVN-PROD2
export CORSIKA_IO_BUFFER=800MB
./grid_prod2-repro.sh %s %s""" % (corsikaFileName, current_conf))
fd.close()
####################################
os.system('chmod u+x run_sim.sh')
os.system('chmod u+x grid_prod2-repro.sh')
cmdTuple = ['./run_sim.sh']
ret = systemCall(0, cmdTuple, sendSimtelOutput)
simtelReturnCode, stdout, stderr = ret['Value']
if (os.system('grep Broken simtel.log') == 0):
DIRAC.gLogger.error('Broken string found in simtel.log')
jobReport.setApplicationStatus('Broken pipe')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute run_sim.sh')
DIRAC.gLogger.error('run_sim.sh status is:', simtelReturnCode)
DIRAC.exit(-1)
## check simtel data/log/histo Output File exist
cfg = cfg_dict[current_conf]
simtelFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.simtel.gz'
cmd = 'mv Data/sim_telarray/' + cfg + '/*/Data/*.simtel.gz ' + simtelFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelLogFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(obslev) + '_' + 'run' + run_number + '.log.gz'
cmd = 'mv Data/sim_telarray/' + cfg + '/*/Log/*.log.gz ' + simtelLogFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelHistFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.hdata.gz'
cmd = 'mv Data/sim_telarray/' + cfg + '/*/Histograms/*.hdata.gz ' + simtelHistFileName
if (os.system(cmd)):
DIRAC.exit(-1)
################################################################
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
Script.registerSwitch("S:", "simtelConfig=", "SimtelConfig", setConfig)
Script.registerSwitch("V:", "version=", "Version", setVersion)
from DIRAC.Resources.Catalog.FileCatalogClient import FileCatalogClient
from DIRAC.Resources.Catalog.FileCatalog import FileCatalog
Script.parseCommandLine()
DIRAC.gLogger.setLevel('INFO')
global fcc, fcL
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
global jobID
jobID = os.environ['JOBID']
jobReport = JobReport(int(jobID))
###########
## Checking MD coherence
fc = FileCatalog('LcgFileCatalog')
res = fc._getCatalogConfigDetails('DIRACFileCatalog')
print 'DFC CatalogConfigDetails:', res
res = fc._getCatalogConfigDetails('LcgFileCatalog')
print 'LCG CatalogConfigDetails:', res
fcc = FileCatalogClient()
fcL = FileCatalog('LcgFileCatalog')
from DIRAC.Interfaces.API.Dirac import Dirac
dirac = Dirac()
############################
install_CorsikaSimtelPack(version)
#############
# simtelConfigFile should be built from ???
#simtelConfigFilesPath = 'sim_telarray/multi'
#simtelConfigFile = simtelConfigFilesPath + '/multi_cta-ultra5.cfg'
#createGlobalsFromConfigFiles(simtelConfigFile)
#createGlobalsFromConfigFiles(current_version)
#######################
## files spread in 1000-runs subDirectories
global corsikaFileLFN
corsikaFileLFN = dirac.getJobJDL(jobID)['Value']['InputData']
print 'corsikaFileLFN is ' + corsikaFileLFN
corsikaFileName = os.path.basename(corsikaFileLFN)
run_number = corsikaFileName.split('run')[1].split('.corsika.gz')[
0] # run001412.corsika.gz
runNum = int(run_number)
subRunNumber = '%03d' % runNum
runNumModMille = runNum % 1000
runNumTrunc = (runNum - runNumModMille) / 1000
runNumSeriesDir = '%03dxxx' % runNumTrunc
print 'runNumSeriesDir=', runNumSeriesDir
f = open('DISABLE_WATCHDOG_CPU_WALLCLOCK_CHECK', 'w')
f.close()
############ Producing SimTel File
######################Building simtel Directory Metadata #######################
cfg_dict = {
"4MSST": 'cta-prod2-4m-dc',
"SCSST": 'cta-prod2-sc-sst',
"STD": 'cta-prod2',
"NSBX3": 'cta-prod2',
"ASTRI": 'cta-prod2-astri',
"SCMST": 'cta-prod2-sc3',
"NORTH": 'cta-prod2n'
}
if simtelConfig == "6INROW":
all_configs = ["4MSST", "SCSST", "ASTRI", "NSBX3", "STD", "SCMST"]
elif simtelConfig == "5INROW":
all_configs = ["4MSST", "SCSST", "ASTRI", "NSBX3", "STD"]
elif simtelConfig == "3INROW":
all_configs = ["SCSST", "STD", "SCMST"]
else:
all_configs = [simtelConfig]
for current_conf in all_configs:
DIRAC.gLogger.notice('current conf is', current_conf)
if current_conf == "SCMST":
current_version = version + '_sc3'
DIRAC.gLogger.notice('current version is', current_version)
if os.path.isdir('sim_telarray'):
DIRAC.gLogger.notice(
'Package found in the local area. Removing package...')
cmd = 'rm -R sim_telarray corsika-6990 hessioxxx corsika-run'
if (os.system(cmd)):
DIRAC.exit(-1)
install_CorsikaSimtelPack(current_version)
else:
current_version = version
DIRAC.gLogger.notice('current version is', current_version)
########################################################
createGlobalsFromConfigFiles(current_version)
resultCreateSimtelDirMD = createSimtelFileSystAndMD(
current_conf, current_version)
if not resultCreateSimtelDirMD['OK']:
DIRAC.gLogger.error('Failed to create simtelArray Directory MD')
jobReport.setApplicationStatus(
'Failed to create simtelArray Directory MD')
DIRAC.gLogger.error(
'Metadata coherence problem, no simtelArray File produced')
DIRAC.exit(-1)
else:
print 'simtel Directory MD successfully created'
############## introduce file existence check here ########################
simtelFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.simtel.gz'
simtelDirPath_conf = simtelDirPath + '_' + current_conf
simtelOutFileDir = os.path.join(simtelDirPath_conf, 'Data',
runNumSeriesDir)
simtelOutFileLFN = os.path.join(simtelOutFileDir, simtelFileName)
res = CheckCatalogCoherence(simtelOutFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('Current conf already done', current_conf)
continue
#### execute simtelarray ################
fd = open('run_sim.sh', 'w')
fd.write("""#! /bin/sh
export SVNPROD2=$PWD
export SVNTAG=SVN-PROD2
export CORSIKA_IO_BUFFER=800MB
./grid_prod2-repro.sh %s %s""" % (corsikaFileName, current_conf))
fd.close()
os.system('chmod u+x grid_prod2-repro.sh')
os.system('chmod u+x run_sim.sh')
cmdTuple = ['./run_sim.sh']
ret = systemCall(0, cmdTuple, sendOutputSimTel)
simtelReturnCode, stdout, stderr = ret['Value']
if (os.system('grep Broken simtel.log')):
DIRAC.gLogger.notice('not broken')
else:
DIRAC.gLogger.notice('broken')
jobReport.setApplicationStatus('Broken pipe')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute run_sim.sh')
DIRAC.gLogger.error('run_sim.sh status is:', simtelReturnCode)
DIRAC.exit(-1)
## putAndRegister simtel data/log/histo Output File:
cfg = cfg_dict[current_conf]
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Data/*.simtel.gz ' + simtelFileName
if (os.system(cmd)):
DIRAC.exit(-1)
############################################
simtelRunNumberSeriesDirExist = fcc.isDirectory(
simtelOutFileDir)['Value']['Successful'][simtelOutFileDir]
newSimtelRunFileSeriesDir = (
simtelRunNumberSeriesDirExist != True
) # if new runFileSeries, will need to add new MD
simtelLogFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(obslev) + '_' + 'run' + run_number + '.log.gz'
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Log/*.log.gz ' + simtelLogFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelOutLogFileDir = os.path.join(simtelDirPath_conf, 'Log',
runNumSeriesDir)
simtelOutLogFileLFN = os.path.join(simtelOutLogFileDir,
simtelLogFileName)
simtelHistFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.hdata.gz'
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Histograms/*.hdata.gz ' + simtelHistFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelOutHistFileDir = os.path.join(simtelDirPath_conf, 'Histograms',
runNumSeriesDir)
simtelOutHistFileLFN = os.path.join(simtelOutHistFileDir,
simtelHistFileName)
########### quality check on Histo Missing because it needs the NSHOW #############################################
########## quality check on Log #############################
cmd = 'zcat %s | grep Finished.' % simtelLogFileName
DIRAC.gLogger.notice('Executing system call:', cmd)
if (os.system(cmd)):
jobReport.setApplicationStatus('Log check Failed')
DIRAC.exit(-1)
################################################
from DIRAC.Core.Utilities import List
from DIRAC.ConfigurationSystem.Client.Helpers.Operations import Operations
opsHelper = Operations()
global seList
seList = opsHelper.getValue('ProductionOutputs/SimtelProd', [])
seList = List.randomize(seList)
DIRAC.gLogger.notice('SeList is:', seList)
######### Upload simtel data/log/histo ##############################################
res = upload_to_seList(simtelOutFileLFN, simtelFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('OutputData Upload Error', simtelOutFileLFN)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
res = CheckCatalogCoherence(simtelOutLogFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('Log file already exists. Removing:',
simtelOutLogFileLFN)
ret = dirac.removeFile(simtelOutLogFileLFN)
res = upload_to_seList(simtelOutLogFileLFN, simtelLogFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Upload simtel Log Error', simtelOutLogFileLFN)
DIRAC.gLogger.notice('Removing simtel data file:',
simtelOutFileLFN)
ret = dirac.removeFile(simtelOutFileLFN)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
res = CheckCatalogCoherence(simtelOutHistFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('Histo file already exists. Removing:',
simtelOutHistFileLFN)
ret = dirac.removeFile(simtelOutHistFileLFN)
res = upload_to_seList(simtelOutHistFileLFN, simtelHistFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Upload simtel Histo Error',
simtelOutHistFileLFN)
DIRAC.gLogger.notice('Removing simtel data file:',
simtelOutFileLFN)
ret = dirac.removeFile(simtelOutFileLFN)
DIRAC.gLogger.notice('Removing simtel log file:',
simtelOutLogFileLFN)
ret = dirac.removeFile(simtelOutLogFileLFN)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
####################################################################
if newSimtelRunFileSeriesDir:
insertRunFileSeriesMD(simtelOutFileDir, runNumTrunc)
insertRunFileSeriesMD(simtelOutLogFileDir, runNumTrunc)
insertRunFileSeriesMD(simtelOutHistFileDir, runNumTrunc)
###### simtel File level metadata ############################################
simtelFileMD = {}
simtelFileMD['runNumber'] = int(run_number)
simtelFileMD['jobID'] = jobID
simtelFileMD['simtelReturnCode'] = simtelReturnCode
result = fcc.setMetadata(simtelOutFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(simtelOutLogFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(simtelOutHistFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.addFileAncestors(
{simtelOutFileLFN: {
'Ancestors': [corsikaFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.addFileAncestors(
{simtelOutLogFileLFN: {
'Ancestors': [corsikaFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.addFileAncestors(
{simtelOutHistFileLFN: {
'Ancestors': [corsikaFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.setMetadata(simtelOutFileLFN, simtelFileMD)
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
DIRAC.exit()
'''
Created on 2015-05-19 21:45:37
@author: suo
'''
import sys
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
from DIRAC.Core.Base import Script
Script.parseCommandLine(ignoreErrors=False)
jobID = sys.argv[1]
experiment = sys.argv[2]
message = sys.argv[3]
jobReport = JobReport(jobID, experiment)
result = jobReport.setApplicationStatus(message)
if not result['OK']:
try:
with open('job.err', 'a') as errFile:
print >> errFile, 'setJobStatus error: %s' % result
except IOError:
print 'IOError:', str(e)
def main():
from DIRAC.Core.Base import Script
Script.initialize()
DIRAC.gLogger.notice('Platform is:')
os.system('dirac-platform')
from CTADIRAC.Core.Workflow.Modules.Read_CtaApp import Read_CtaApp
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
version = sys.argv[3]
DIRAC.gLogger.notice('Version:', version)
install_CorsikaSimtelPack(version)
######### run read_cta #######################################
rcta = Read_CtaApp()
CorsikaSimtelPack = os.path.join('corsika_simhessarray', version,
'corsika_simhessarray')
rcta.setSoftwarePackage(CorsikaSimtelPack)
rcta.rctaExe = 'read_cta'
# add arguments for read_cta specified by user ######
args = []
rctaparfile = open('read_cta.par', 'r').readlines()
for line in rctaparfile:
for word in line.split():
args.append(word)
simtelFileLFN = sys.argv[-1].split('ParametricInputData=LFN:')[1]
simtelFileName = os.path.basename(simtelFileLFN)
dstFileName = simtelFileName.replace('simtel.gz', 'simtel-dst0.gz')
dstHistoFileName = simtelFileName.replace('simtel.gz', 'hdata-dst0.gz')
args.extend([
'--dst-file', dstFileName, '--histogram-file', dstHistoFileName,
simtelFileName
])
rcta.rctaArguments = args
rctaReturnCode = rcta.execute()
if rctaReturnCode != 0:
DIRAC.gLogger.error('read_cta Application: Failed')
jobReport.setApplicationStatus('read_cta Application: Failed')
DIRAC.exit(-1)
#################################################################
from CTADIRAC.Core.Utilities.SoftwareInstallation import getSoftwareEnviron
ret = getSoftwareEnviron(CorsikaSimtelPack)
if not ret['OK']:
error = ret['Message']
DIRAC.gLogger.error(error, CorsikaSimtelPack)
DIRAC.exit(-1)
read_ctaEnviron = ret['Value']
######## run dst quality checks ######################################
fd = open('check_dst_histo.sh', 'w')
fd.write("""#! /bin/sh
dsthistfilename=%s
dstfile=%s
n6="$(list_histograms -h 6 ${dsthistfilename} | grep 'Histogram of type' | sed 's/.*bins, //' | sed 's/ entries.//')"
n12001="$(list_histograms -h 12001 ${dsthistfilename} | grep 'Histogram of type' | sed 's/.*bins, //' | sed 's/ entries.//')"
if [ $n6 -ne $n12001 ]; then
echo 'n6 found:' $n6
echo 'n12001 found:' $n12001
exit 1
else
echo 'n6 found:' $n6
echo 'n12001 found:' $n12001
fi
n12002="$(list_histograms -h 12002 ${dsthistfilename} | grep 'Histogram of type' | sed 's/.*bins, //' | sed 's/ entries.//')"
nev="$(statio ${dstfile} | egrep '^2010' | cut -f2)"
if [ -z "$nev" ]; then nev="0"; fi
if [ $nev -ne $n12002 ]; then
echo 'nev found:' $nev
echo 'n12002 found:' $n12002
exit 1
else
echo 'nev found:' $nev
echo 'n12002 found:' $n12002
fi
""" % (dstHistoFileName, dstFileName))
fd.close()
os.system('chmod u+x check_dst_histo.sh')
cmdTuple = ['./check_dst_histo.sh']
DIRAC.gLogger.notice('Executing command tuple:', cmdTuple)
ret = systemCall(0, cmdTuple, sendOutput, env=read_ctaEnviron)
checkHistoReturnCode, stdout, stderr = ret['Value']
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute check_dst_histo.sh')
DIRAC.gLogger.error('check_dst_histo.sh status is:',
checkHistoReturnCode)
DIRAC.exit(-1)
if (checkHistoReturnCode != 0):
DIRAC.gLogger.error('Failure during check_dst_histo.sh')
DIRAC.gLogger.error('check_dst_histo.sh status is:',
checkHistoReturnCode)
jobReport.setApplicationStatus('Histo check Failed')
DIRAC.exit(-1)
DIRAC.exit()
#!/usr/bin/env python
import os
import sys
from DIRAC.Core.Base import Script
Script.initialize(ignoreErrors=True)
from DIRAC.Interfaces.API.Dirac import Dirac
from DIRAC.Interfaces.API.Job import Job
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ.get('DIRACJOBID', '0')
if not jobID:
print 'DIRAC job ID not found'
sys.exit(1)
jobReport = JobReport(jobID, 'JUNO_JobScript')
result = jobReport.setApplicationStatus(', '.join(sys.argv[1:]))
if not result['OK']:
print 'Set application status error: %s' % result
def main():
from DIRAC.Core.Base import Script
#### eventio_cta options ##########################################
Script.registerSwitch("T:", "tellist=", "Tellist", setTellist)
Script.registerSwitch("F:", "Nfirst_mcevt=", "Nfirst_mcevt",
setNfirst_mcevt)
Script.registerSwitch("L:", "Nlast_mcevt=", "Nlast_mcevt", setNlast_mcevt)
## add other eventio_cta options ################################
# Script.registerSwitch( "N:", "num=", "Num", setNum)
## Script.registerSwitch( "L:", "limitmc=", "Limitmc", setLimitmc)
# Script.registerSwitch( "S:", "telidoffset=", "Telidoffset", setTelidoffset)
Script.registerSwitch("P:", "pixelslices=", "setPixelslices (true/false)",
setPixelslices)
Script.registerSwitch("p:", "run_number=",
"Run Number (set automatically)", setRunNumber)
### other options ###############################################
Script.registerSwitch("V:", "version=", "HAP version", setVersion)
Script.parseCommandLine(ignoreErrors=True)
args = Script.getPositionalArgs()
if len(args) < 1:
Script.showHelp()
if tellist == None or version == None:
Script.showHelp()
jobReport.setApplicationStatus('Options badly specified')
DIRAC.exit(-1)
from CTADIRAC.Core.Workflow.Modules.HapApplication import HapApplication
from CTADIRAC.Core.Workflow.Modules.HapRootMacro import HapRootMacro
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import getSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
HapPack = 'HAP/' + version + '/HAP'
packs = ['HESS/v0.2/lib', 'HESS/v0.3/root', HapPack]
for package in packs:
DIRAC.gLogger.notice('Checking:', package)
if sharedArea:
if checkSoftwarePackage(package, sharedArea())['OK']:
DIRAC.gLogger.notice('Package found in Shared Area:', package)
continue
if localArea:
if checkSoftwarePackage(package, localArea())['OK']:
DIRAC.gLogger.notice('Package found in Local Area:', package)
continue
if installSoftwarePackage(package, localArea())['OK']:
continue
DIRAC.gLogger.error('Check Failed for software package:', package)
DIRAC.gLogger.error('Software package not available')
DIRAC.exit(-1)
telconf = os.path.join(localArea(),
'HAP/%s/config/%s' % (version, tellist))
ha = HapApplication()
ha.setSoftwarePackage(HapPack)
ha.hapExecutable = 'eventio_cta'
fileout = 'raw_' + part_type + '_run' + run_number + '.root'
infile = build_infile()
ha.hapArguments = ['-file', infile, '-o', fileout, '-tellist', telconf]
try:
ha.hapArguments.extend(
['-Nfirst_mcevt', Nfirst_mcevt, '-Nlast_mcevt', Nlast_mcevt])
except NameError:
DIRAC.gLogger.info('Nfirst_mcevt/Nlast_mcevt options are not used')
try:
if (pixelslices == 'true'):
ha.hapArguments.extend(['-pixelslices'])
except NameError:
DIRAC.gLogger.info('pixelslices option is not used')
DIRAC.gLogger.notice('Executing Hap Converter Application')
res = ha.execute()
if not res['OK']:
DIRAC.gLogger.error('Failed to execute eventio_cta Application')
jobReport.setApplicationStatus('eventio_cta: Failed')
DIRAC.exit(-1)
if not os.path.isfile(fileout):
error = 'raw file was not created:'
DIRAC.gLogger.error(error, fileout)
jobReport.setApplicationStatus('eventio_cta: RawData not created')
DIRAC.exit(-1)
###################### Check RAW DATA: step0 #######################
hr = HapRootMacro()
hr.setSoftwarePackage(HapPack)
DIRAC.gLogger.notice('Executing RAW check step0')
hr.rootMacro = '/hapscripts/dst/Open_Raw.C+'
outfilestr = '"' + fileout + '"'
args = [outfilestr]
DIRAC.gLogger.notice('Open_Raw macro Arguments:', args)
hr.rootArguments = args
DIRAC.gLogger.notice('Executing Hap Open_Raw macro')
res = hr.execute()
if not res['OK']:
DIRAC.gLogger.error('Open_Raw: Failed')
DIRAC.exit(-1)
#####################Check RAW DATA: step1 ##################
DIRAC.gLogger.notice('Executing Raw Check step1')
ret = getSoftwareEnviron(HapPack)
if not ret['OK']:
error = ret['Message']
DIRAC.gLogger.error(error, HapPack)
DIRAC.exit(-1)
hapEnviron = ret['Value']
hessroot = hapEnviron['HESSROOT']
check_script = hessroot + '/hapscripts/dst/check_raw.csh'
cmdTuple = [check_script]
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute RAW Check step1')
jobReport.setApplicationStatus('Check_raw: Failed')
DIRAC.exit(-1)
status, stdout, stderr = ret['Value']
if status == 1:
jobReport.setApplicationStatus(
'RAW Check step1: Big problem during RAW production')
DIRAC.gLogger.error('Check_raw: Big problem during RAW production')
DIRAC.exit(-1)
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
Script.registerSwitch("T:", "template=", "Corsika Template")
Script.registerSwitch("p:", "run_number=",
"Do not use: Run Number automatically set")
Script.registerSwitch("E:", "executable=",
"Executable (Use SetExecutable)")
Script.registerSwitch("v:", "version=", "Version (Use setVersion)")
Script.registerSwitch("D:", "dcta=", "dcta")
Script.registerSwitch("I:", "icta=", "icta")
Script.registerSwitch("C:", "c_cta=", "c_cta")
Script.parseCommandLine(ignoreErrors=False)
## default values ##############
run_number = None
template = None
executable = None
version = None
### set switch values ###
for switch in Script.getUnprocessedSwitches():
if switch[0] == "run_number" or switch[0] == "p":
run_number = switch[1].split('ParametricParameters=')[1]
elif switch[0] == "template" or switch[0] == "T":
template = switch[1]
elif switch[0] == "executable" or switch[0] == "E":
executable = switch[1]
elif switch[0] == "version" or switch[0] == "v":
version = switch[1]
if version == None or executable == None or run_number == None or template == None:
Script.showHelp()
jobReport.setApplicationStatus('Missing options')
DIRAC.exit(-1)
from CTADIRAC.Core.Workflow.Modules.CorsikaApp import CorsikaApp
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import getSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
CorsikaSimtelPack = 'corsika_simhessarray/' + version + '/corsika_simhessarray'
packs = [CorsikaSimtelPack]
for package in packs:
DIRAC.gLogger.notice('Checking:', package)
if sharedArea:
if checkSoftwarePackage(package, sharedArea())['OK']:
DIRAC.gLogger.notice('Package found in Shared Area:', package)
installSoftwareEnviron(package, workingArea())
packageTuple = package.split('/')
corsika_subdir = sharedArea(
) + '/' + packageTuple[0] + '/' + version
cmd = 'cp -u -r ' + corsika_subdir + '/* .'
os.system(cmd)
continue
if workingArea:
if checkSoftwarePackage(package, workingArea())['OK']:
DIRAC.gLogger.notice('Package found in Local Area:', package)
continue
if installSoftwarePackage(package, workingArea())['OK']:
############## compile #############################
cmdTuple = ['./build_all', 'prod2', 'qgs2']
######### special case for Astri ############################
if version == 'prod-2_08072014_to':
############## compile #############################
fd = open('run_compile.sh', 'w')
fd.write("""#! /bin/sh
source ./build_all prod2 qgs2
#
echo " Let's check that build_all did its work "
ls -alFsh
echo "+++++++++++++++++++++++++++++++++++++++++++++++++"
echo " Let's see what files are in the corsika-run directory "
ls -alFsh ./corsika-run
#
if [ ! -x ./corsika-run/corsika ]
then
echo " ERROR: Corsika executable found. Exit "
exit 1
fi
echo "+++++++++++++++++++++++++++++++++++++++++++++++++"
#
echo " Now let's try to compile hessio according to Federico's recipe "
cd ./hessioxxx
make clean
make EXTRA_DEFINES="-DCTA_PROD2 -DWITH_LOW_GAIN_CHANNEL"
#
echo " Let's see what files are in the lib directory "
ls -alFsh ./lib
#
if [ ! -f ./lib/libhessio.so ]
then
echo " ERROR: libhessio library not found. Exit "
exit 1
fi
echo "+++++++++++++++++++++++++++++++++++++++++++++++++"
#
cd .. # come back to original dir
#
echo " Now let's try to compile simtel according to Federico's recipe "
cd ./sim_telarray
make clean
make EXTRA_DEFINES="-DCTA_PROD2 -DWITH_LOW_GAIN_CHANNEL"
make install
#
echo " Let's see what files are in the bin directory "
ls -alFsh ./bin
#
if [ ! -x ./bin/sim_telarray ]
then
echo " ERROR: sim_telarray excutable not found. Exit "
exit 1
fi
echo "+++++++++++++++++++++++++++++++++++++++++++++++++"
#
echo " Everything was compiled and linked properly" """)
fd.close()
os.system('chmod u+x run_compile.sh')
cmdTuple = ['./run_compile.sh']
##########################################################################
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute build')
DIRAC.exit(-1)
continue
DIRAC.gLogger.error('Check Failed for software package:', package)
DIRAC.gLogger.error('Software package not available')
DIRAC.exit(-1)
###### execute corsika ###############
cs = CorsikaApp()
cs.setSoftwarePackage(CorsikaSimtelPack)
cs.csExe = executable
cs.csArguments = ['--run-number', run_number, '--run', 'corsika', template]
corsikaReturnCode = cs.execute()
if corsikaReturnCode != 0:
DIRAC.gLogger.error('Failed to execute corsika Application')
jobReport.setApplicationStatus('Corsika Application: Failed')
DIRAC.exit(-1)
###### rename corsika file #################################
rundir = 'run' + run_number
corsikaKEYWORDS = ['TELFIL']
dictCorsikaKW = fileToKWDict(template, corsikaKEYWORDS)
corsikafilename = rundir + '/' + dictCorsikaKW['TELFIL'][0]
destcorsikafilename = 'corsika_run' + run_number + '.corsika.gz'
cmd = 'mv ' + corsikafilename + ' ' + destcorsikafilename
os.system(cmd)
### create corsika tar ####################
corsika_tar = 'corsika_run' + run_number + '.tar.gz'
filetar1 = rundir + '/' + 'input'
filetar2 = rundir + '/' + 'DAT' + run_number + '.dbase'
filetar3 = rundir + '/run' + str(int(run_number)) + '.log'
cmdTuple = ['/bin/tar', 'zcf', corsika_tar, filetar1, filetar2, filetar3]
DIRAC.gLogger.notice('Executing command tuple:', cmdTuple)
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute tar')
DIRAC.exit(-1)
###### execute sim_telarray ###############
ret = getSoftwareEnviron(CorsikaSimtelPack)
if not ret['OK']:
error = ret['Message']
DIRAC.gLogger.error(error, CorsikaSimtelPack)
DIRAC.exit(-1)
corsikaEnviron = ret['Value']
cmdTuple = ['sim_telarray']
# add input file argument for sim_telarray ###################
inputfile = 'input_file=' + destcorsikafilename
inputfileopt = ['-C', inputfile]
cmdTuple.extend(inputfileopt)
# add output file argument for sim_telarray
destsimtelfilename = 'simtel_run' + run_number + '.simtel.gz'
outputfile = 'output_file=' + destsimtelfilename
outputfileopt = ['-C', outputfile]
cmdTuple.extend(outputfileopt)
# add histo argument for sim_telarray
desthistofilename = 'simtel_run' + run_number + '.hdata.gz'
histofile = 'histogram_file=' + desthistofilename
histofileopt = ['-C', histofile]
cmdTuple.extend(histofileopt)
# add other arguments for sim_telarray specified by user ######
simtelparfile = open('simtel.par', 'r').readlines()
for line in simtelparfile:
for word in line.split():
cmdTuple.append(word)
DIRAC.gLogger.notice('Executing command tuple:', cmdTuple)
ret = systemCall(0, cmdTuple, sendSimtelOutput, env=corsikaEnviron)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute:', simexe)
DIRAC.exit(-1)
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
Script.registerSwitch( "p:", "run_number=", "Run Number", setRunNumber )
Script.registerSwitch( "R:", "run=", "Run", setRun )
Script.registerSwitch( "P:", "config_path=", "Config Path", setConfigPath )
Script.registerSwitch( "T:", "template=", "Template", setTemplate )
Script.registerSwitch( "E:", "executable=", "Executable", setExecutable )
Script.registerSwitch( "V:", "version=", "Version", setVersion )
Script.registerSwitch( "M:", "mode=", "Mode", setMode )
Script.parseCommandLine( ignoreErrors = True )
args = Script.getPositionalArgs()
if len( args ) < 1:
Script.showHelp()
if version == None or executable == None or run_number == None or run == None or template == None:
Script.showHelp()
jobReport.setApplicationStatus('Options badly specified')
DIRAC.exit( -1 )
from CTADIRAC.Core.Workflow.Modules.CorsikaApp import CorsikaApp
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int( jobID )
jobReport = JobReport( jobID )
CorsikaSimtelPack = 'corsika_simhessarray/' + version + '/corsika_simhessarray'
packs = [CorsikaSimtelPack]
for package in packs:
DIRAC.gLogger.notice( 'Checking:', package )
if sharedArea:
if checkSoftwarePackage( package, sharedArea() )['OK']:
DIRAC.gLogger.notice( 'Package found in Shared Area:', package )
installSoftwareEnviron( package, workingArea() )
packageTuple = package.split('/')
corsika_subdir = sharedArea() + '/' + packageTuple[0] + '/' + version
cmd = 'cp -r ' + corsika_subdir + '/* .'
os.system(cmd)
continue
if workingArea:
if checkSoftwarePackage( package, workingArea() )['OK']:
DIRAC.gLogger.notice( 'Package found in Local Area:', package )
continue
if installSoftwarePackage( package, workingArea() )['OK']:
############## compile #############################
if version == 'clean_23012012':
cmdTuple = ['./build_all','ultra','qgs2']
elif version in ['prod-2_21122012','prod-2_08032013','prod-2_06052013']:
cmdTuple = ['./build_all','prod2','qgs2']
ret = systemCall( 0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error( 'Failed to execute build')
DIRAC.exit( -1 )
continue
DIRAC.gLogger.error( 'Check Failed for software package:', package )
DIRAC.gLogger.error( 'Software package not available')
DIRAC.exit( -1 )
cs = CorsikaApp()
cs.setSoftwarePackage(CorsikaSimtelPack)
cs.csExe = executable
cs.csArguments = ['--run-number',run_number,'--run',run,template]
corsikaReturnCode = cs.execute()
if corsikaReturnCode != 0:
DIRAC.gLogger.error( 'Failed to execute corsika Application')
jobReport.setApplicationStatus('Corsika Application: Failed')
DIRAC.exit( -1 )
###### rename corsika file #################################
rundir = 'run' + run_number
corsikaKEYWORDS = ['TELFIL']
dictCorsikaKW = fileToKWDict(template,corsikaKEYWORDS)
corsikafilename = rundir + '/' + dictCorsikaKW['TELFIL'][0]
destcorsikafilename = 'corsika_run' + run_number + '.corsika.gz'
cmd = 'mv ' + corsikafilename + ' ' + destcorsikafilename
os.system(cmd)
### create corsika tar ####################
corsika_tar = 'corsika_run' + run_number + '.tar.gz'
filetar1 = rundir + '/'+'input'
filetar2 = rundir + '/'+ 'DAT' + run_number + '.dbase'
filetar3 = rundir + '/run' + str(int(run_number)) + '.log'
cmdTuple = ['/bin/tar','zcf',corsika_tar, filetar1,filetar2,filetar3]
DIRAC.gLogger.notice( 'Executing command tuple:', cmdTuple )
ret = systemCall( 0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error( 'Failed to execute tar')
DIRAC.exit( -1 )
DIRAC.exit()
class FailoverRequest(ModuleBase):
""" Handle the failover requests issued by previous steps. Used in production.
"""
#############################################################################
def __init__(self):
"""Module initialization.
"""
super(FailoverRequest, self).__init__()
self.version = __RCSID__
self.log = gLogger.getSubLogger( "FailoverRequest" )
#Internal parameters
self.enable = True
self.jobID = ''
self.productionID = None
self.prodJobID = None
#Workflow parameters
self.jobReport = None
self.fileReport = None
self.request = None
#############################################################################
def applicationSpecificInputs(self):
""" By convention the module input parameters are resolved here.
"""
self.log.debug(self.workflow_commons)
self.log.debug(self.step_commons)
if os.environ.has_key('JOBID'):
self.jobID = os.environ['JOBID']
self.log.verbose('Found WMS JobID = %s' %self.jobID)
else:
self.log.info('No WMS JobID found, disabling module via control flag')
self.enable = False
if self.step_commons.has_key('Enable'):
self.enable = self.step_commons['Enable']
if not type(self.enable) == type(True):
self.log.warn('Enable flag set to non-boolean value %s, setting to False' % self.enable)
self.enable = False
#Earlier modules will have populated the report objects
if self.workflow_commons.has_key('JobReport'):
self.jobReport = self.workflow_commons['JobReport']
if self.workflow_commons.has_key('FileReport'):
self.fileReport = self.workflow_commons['FileReport']
if self.InputData:
if type(self.InputData) != type([]):
self.InputData = self.InputData.split(';')
self.InputData = [x.replace('LFN:','') for x in self.InputData]
if self.workflow_commons.has_key('Request'):
self.request = self.workflow_commons['Request']
if not self.request:
self.request = RequestContainer()
self.request.setRequestName('job_%s_request.xml' % self.jobID)
self.request.setJobID(self.jobID)
self.request.setSourceComponent("Job_%s" % self.jobID)
if self.workflow_commons.has_key('PRODUCTION_ID'):
self.productionID = self.workflow_commons['PRODUCTION_ID']
if self.workflow_commons.has_key('JOB_ID'):
self.prodJobID = self.workflow_commons['JOB_ID']
return S_OK('Parameters resolved')
#############################################################################
def execute(self):
""" Main execution function.
"""
self.log.info('Initializing %s' % self.version)
result = self.resolveInputVariables()
if not result['OK']:
self.log.error(result['Message'])
return result
if not self.fileReport:
self.fileReport = FileReport('Transformation/TransformationManager')
if self.InputData:
inputFiles = self.fileReport.getFiles()
for lfn in self.InputData:
if not lfn in inputFiles:
self.log.verbose('No status populated for input data %s, setting to "Unused"' % lfn)
result = self.fileReport.setFileStatus(int(self.productionID), lfn, 'Unused')
if not self.workflowStatus['OK'] or not self.stepStatus['OK']:
self.log.info('Workflow status = %s, step status = %s' %(self.workflowStatus['OK'], self.stepStatus['OK']))
inputFiles = self.fileReport.getFiles()
for lfn in inputFiles:
if inputFiles[lfn] != 'ApplicationCrash':
self.log.info('Forcing status to "Unused" due to workflow failure for: %s' % (lfn))
self.fileReport.setFileStatus(int(self.productionID), lfn, 'Unused')
else:
inputFiles = self.fileReport.getFiles()
if inputFiles:
self.log.info('Workflow status OK, setting input file status to Processed')
for lfn in inputFiles:
self.log.info('Setting status to "Processed" for: %s' % (lfn))
self.fileReport.setFileStatus(int(self.productionID), lfn, 'Processed')
result = self.fileReport.commit()
if not result['OK']:
self.log.error('Failed to report file status to ProductionDB, request will be generated', result['Message'])
else:
self.log.info('Status of files have been properly updated in the ProcessingDB')
# Must ensure that the local job report instance is used to report the final status
# in case of failure and a subsequent failover operation
if self.workflowStatus['OK'] and self.stepStatus['OK']:
if not self.jobReport:
self.jobReport = JobReport(int(self.jobID))
jobStatus = self.jobReport.setApplicationStatus('Job Finished Successfully')
if not jobStatus['OK']:
self.log.warn(jobStatus['Message'])
# Retrieve the accumulated reporting request
reportRequest = None
if self.jobReport:
result = self.jobReport.generateRequest()
if not result['OK']:
self.log.warn('Could not generate request for job report with result:\n%s' % (result))
else:
reportRequest = result['Value']
if reportRequest:
self.log.info('Populating request with job report information')
self.request.update(reportRequest)
fileReportRequest = None
if self.fileReport:
result = self.fileReport.generateRequest()
if not result['OK']:
self.log.warn('Could not generate request for file report with result:\n%s' % (result))
else:
fileReportRequest = result['Value']
if fileReportRequest:
self.log.info('Populating request with file report information')
result = self.request.update(fileReportRequest)
accountingReport = None
if self.workflow_commons.has_key('AccountingReport'):
accountingReport = self.workflow_commons['AccountingReport']
if accountingReport:
result = accountingReport.commit()
if not result['OK']:
self.log.info('Populating request with accounting report information')
self.request.setDISETRequest(result['rpcStub'])
if self.request.isEmpty()['Value']:
self.log.info('Request is empty, nothing to do.')
return self.finalize()
request_string = self.request.toXML()['Value']
self.log.debug(request_string)
# Write out the request string
fname = '%s_%s_request.xml' % (self.productionID, self.prodJobID)
xmlfile = open(fname, 'w')
xmlfile.write(request_string)
xmlfile.close()
self.log.info('Creating failover request for deferred operations for job %s:' % self.jobID)
result = self.request.getDigest()
if result['OK']:
digest = result['Value']
self.log.info(digest)
if not self.enable:
self.log.info('Module is disabled by control flag')
return S_OK('Module is disabled by control flag')
return self.finalize()
#############################################################################
def finalize(self):
""" Finalize and report correct status for the workflow based on the workflow
or step status.
"""
self.log.verbose('Workflow status = %s, step status = %s' % (self.workflowStatus['OK'], self.stepStatus['OK']))
if not self.workflowStatus['OK'] or not self.stepStatus['OK']:
self.log.warn('Workflow status is not ok, will not overwrite status')
self.log.info('Workflow failed, end of FailoverRequest module execution.')
return S_ERROR('Workflow failed, FailoverRequest module completed')
self.log.info('Workflow successful, end of FailoverRequest module execution.')
return S_OK('FailoverRequest module completed')
#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#EOF#
def main():
from DIRAC.Core.Base import Script
Script.initialize()
DIRAC.gLogger.notice('Platform is:')
os.system('dirac-platform')
from DIRAC.DataManagementSystem.Client.DataManager import DataManager
from CTADIRAC.Core.Workflow.Modules.EvnDispApp import EvnDispApp
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
version = sys.argv[3]
DIRAC.gLogger.notice('Version:', version)
EvnDispPack = os.path.join('evndisplay', version, 'evndisplay')
packs = [EvnDispPack]
for package in packs:
DIRAC.gLogger.notice('Checking:', package)
if checkSoftwarePackage(package, sharedArea())['OK']:
DIRAC.gLogger.notice('Package found in Shared Area:', package)
installSoftwareEnviron(package, sharedArea())
continue
else:
installSoftwarePackage(package, workingArea())
DIRAC.gLogger.notice('Package found in workingArea:', package)
continue
DIRAC.gLogger.error('Check Failed for software package:', package)
DIRAC.gLogger.error('Software package not available')
DIRAC.exit(-1)
ed = EvnDispApp()
ed.setSoftwarePackage(EvnDispPack)
dstFileLFNList = sys.argv[-1].split('ParametricParameters={')[1].split(
'}')[0].replace(',', ' ')
args = []
i = 0
for word in dstFileLFNList.split():
i = i + 1
dstfile = os.path.basename(word)
###### execute evndisplay stage1 ###############
executable = sys.argv[5]
logfileName = executable + '_' + str(i) + '.log'
args = ['-sourcefile', dstfile, '-outputdirectory', 'outdir']
# add other arguments for evndisp specified by user ######
evndispparfile = open('evndisp.par', 'r').readlines()
for line in evndispparfile:
for word in line.split():
args.append(word)
execute_module(ed, executable, args)
for name in glob.glob('outdir/*.root'):
evndispOutFile = name.split('.root')[0] + '_' + str(
jobID) + '_evndisp.root'
cmd = 'mv ' + name + ' ' + os.path.basename(evndispOutFile)
if (os.system(cmd)):
DIRAC.exit(-1)
########### quality check on Log #############################################
cmd = 'mv ' + executable + '.log' + ' ' + logfileName
if (os.system(cmd)):
DIRAC.exit(-1)
fd = open('check_log.sh', 'w')
fd.write("""#! /bin/sh
if grep -i "error" %s; then
exit 1
fi
if grep "Final checks on result file (seems to be OK):" %s; then
exit 0
else
exit 1
fi
""" % (logfileName, logfileName))
fd.close()
os.system('chmod u+x check_log.sh')
cmd = './check_log.sh'
DIRAC.gLogger.notice('Executing system call:', cmd)
if (os.system(cmd)):
jobReport.setApplicationStatus('EvnDisp Log Check Failed')
DIRAC.exit(-1)
##################################################################
########### remove the dst file #############################################
cmd = 'rm ' + dstfile
if (os.system(cmd)):
DIRAC.exit(-1)
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
### DoCtaIrf options ##########################################################
Script.registerSwitch("A:", "analysis=", "Analysis Type", setAnalysisType)
Script.registerSwitch("C:", "cuts=", "Cuts Config", setCutsConfig)
Script.registerSwitch("R:", "runlist=", "Runlist", setRunlist)
Script.registerSwitch("Z:", "zenith=", "Zenith", setZenith)
Script.registerSwitch("O:", "offset=", "Offset", setOffset)
Script.registerSwitch("M:", "energy=", "Energy Method", setEnergyMethod)
Script.registerSwitch("T:", "arrayconfig=", "Array Configuration",
setArrayConfig)
Script.registerSwitch("P:", "particle=", "Particle Type", setParticleType)
## other options
Script.registerSwitch("V:", "version=", "HAP version", setVersion)
Script.parseCommandLine(ignoreErrors=True)
args = Script.getPositionalArgs()
if len(args) < 1:
Script.showHelp()
from CTADIRAC.Core.Workflow.Modules.HapApplication import HapApplication
from CTADIRAC.Core.Workflow.Modules.HapRootMacro import HapRootMacro
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import getSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
ha = HapApplication()
HapPack = 'HAP/' + version + '/HAP'
packs = ['HESS/v0.2/lib', 'HESS/v0.3/root', HapPack]
for package in packs:
DIRAC.gLogger.notice('Checking:', package)
if sharedArea:
if checkSoftwarePackage(package, sharedArea())['OK']:
DIRAC.gLogger.notice('Package found in Shared Area:', package)
continue
if localArea:
if checkSoftwarePackage(package, localArea())['OK']:
DIRAC.gLogger.notice('Package found in Local Area:', package)
continue
if installSoftwarePackage(package, localArea())['OK']:
continue
DIRAC.gLogger.error('Check Failed for software package:', package)
DIRAC.gLogger.error('Software package not available')
DIRAC.exit(-1)
ha.setSoftwarePackage(HapPack)
ha.hapExecutable = 'DoCtaIrf'
runlistdir = os.environ['PWD']
build_infile(runlist)
ha.hapArguments = [
analysistype, cutsconfig, runlistdir, runlist, zenith, offset,
arrayconfig, energymethod, particle
]
DIRAC.gLogger.notice('Executing Hap Application')
res = ha.execute()
if not res['OK']:
DIRAC.gLogger.error('Failed to execute Hap Application')
jobReport.setApplicationStatus('Hap Application: Failed')
DIRAC.exit(-1)
###################### Check TTree Output File #######################
outfile = 'MVAFile_' + runlist + ".root"
if not os.path.isfile(outfile):
error = 'TTree file was not created:'
DIRAC.gLogger.error(error, outfile)
jobReport.setApplicationStatus('DoCtaIrf: TTree file not created')
DIRAC.exit(-1)
###################### Quality Check for TTree Output File: step0######################
hr = HapRootMacro()
hr.setSoftwarePackage(HapPack)
DIRAC.gLogger.notice('Executing TTree check step0')
hr.rootMacro = '/hapscripts/mva/Open_TT.C+'
outfilestr = '"' + outfile + '"'
args = [outfilestr]
DIRAC.gLogger.notice('Open_TT macro Arguments:', args)
hr.rootArguments = args
DIRAC.gLogger.notice('Executing Hap Open_TT macro')
res = hr.execute()
if not res['OK']:
DIRAC.gLogger.error('Open_TT: Failed')
DIRAC.exit(-1)
#########################Quality Check for TTree Output File: step1####################
DIRAC.gLogger.notice('Executing TTree check step1')
ret = getSoftwareEnviron(HapPack)
if not ret['OK']:
error = ret['Message']
DIRAC.gLogger.error(error, HapPack)
DIRAC.exit(-1)
hapEnviron = ret['Value']
hessroot = hapEnviron['HESSROOT']
check_script = hessroot + '/hapscripts/mva/check_TT.csh'
cmdTuple = [check_script]
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute TTree Check step1')
jobReport.setApplicationStatus('Check_TTree: Failed')
DIRAC.exit(-1)
#############################################
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
Script.registerSwitch("p:", "run_number=", "Run Number", setRunNumber)
Script.registerSwitch("T:", "template=", "Template", setCorsikaTemplate)
Script.registerSwitch("E:", "executable=", "Executable", setExecutable)
Script.registerSwitch("S:", "simtelConfig=", "SimtelConfig", setConfig)
Script.registerSwitch("V:", "version=", "Version", setVersion)
Script.registerSwitch("M:", "mode=", "Mode", setMode)
Script.registerSwitch("C:", "savecorsika=", "Save Corsika", setSaveCorsika)
from DIRAC.Resources.Catalog.FileCatalogClient import FileCatalogClient
from DIRAC.Resources.Catalog.FileCatalog import FileCatalog
Script.parseCommandLine()
global fcc, fcL, storage_element
from CTADIRAC.Core.Utilities.SoftwareInstallation import getSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from CTADIRAC.Core.Workflow.Modules.CorsikaApp import CorsikaApp
from CTADIRAC.Core.Workflow.Modules.Read_CtaApp import Read_CtaApp
from DIRAC.Core.Utilities.Subprocess import systemCall
jobID = os.environ['JOBID']
jobID = int(jobID)
global jobReport
jobReport = JobReport(jobID)
###########
## Checking MD coherence
fc = FileCatalog('LcgFileCatalog')
res = fc._getCatalogConfigDetails('DIRACFileCatalog')
print 'DFC CatalogConfigDetails:', res
res = fc._getCatalogConfigDetails('LcgFileCatalog')
print 'LCG CatalogConfigDetails:', res
fcc = FileCatalogClient()
fcL = FileCatalog('LcgFileCatalog')
from DIRAC.Interfaces.API.Dirac import Dirac
dirac = Dirac()
#############
simtelConfigFilesPath = 'sim_telarray/multi'
simtelConfigFile = simtelConfigFilesPath + '/multi_cta-ultra5.cfg'
#simtelConfigFile = simtelConfigFilesPath + '/multi_cta-prod1s.cfg'
createGlobalsFromConfigFiles('prodConfigFile', corsikaTemplate, version)
######################Building prod Directory Metadata #######################
resultCreateProdDirMD = createProdFileSystAndMD()
if not resultCreateProdDirMD['OK']:
DIRAC.gLogger.error('Failed to create prod Directory MD')
jobReport.setApplicationStatus('Failed to create prod Directory MD')
DIRAC.gLogger.error('Metadata coherence problem, no file produced')
DIRAC.exit(-1)
else:
print 'prod Directory MD successfully created'
######################Building corsika Directory Metadata #######################
resultCreateCorsikaDirMD = createCorsikaFileSystAndMD()
if not resultCreateCorsikaDirMD['OK']:
DIRAC.gLogger.error('Failed to create corsika Directory MD')
jobReport.setApplicationStatus('Failed to create corsika Directory MD')
DIRAC.gLogger.error(
'Metadata coherence problem, no corsikaFile produced')
DIRAC.exit(-1)
else:
print 'corsika Directory MD successfully created'
############ Producing Corsika File
global CorsikaSimtelPack
CorsikaSimtelPack = os.path.join('corsika_simhessarray', version,
'corsika_simhessarray')
install_CorsikaSimtelPack(version, 'sim')
cs = CorsikaApp()
cs.setSoftwarePackage(CorsikaSimtelPack)
cs.csExe = executable
cs.csArguments = [
'--run-number', run_number, '--run', 'corsika', corsikaTemplate
]
corsikaReturnCode = cs.execute()
if corsikaReturnCode != 0:
DIRAC.gLogger.error('Corsika Application: Failed')
jobReport.setApplicationStatus('Corsika Application: Failed')
DIRAC.exit(-1)
###################### rename of corsika output file #######################
rundir = 'run' + run_number
filein = rundir + '/' + corsikaOutputFileName
corsikaFileName = particle + '_' + thetaP + '_' + phiP + '_alt' + obslev + '_' + 'run' + run_number + '.corsika.gz'
mv_cmd = 'mv ' + filein + ' ' + corsikaFileName
if (os.system(mv_cmd)):
DIRAC.exit(-1)
########################
########################
## files spread in 1000-runs subDirectories
runNum = int(run_number)
subRunNumber = '%03d' % runNum
runNumModMille = runNum % 1000
runNumTrunc = (runNum - runNumModMille) / 1000
runNumSeriesDir = '%03dxxx' % runNumTrunc
print 'runNumSeriesDir=', runNumSeriesDir
### create corsika tar luisa ####################
corsikaTarName = particle + '_' + thetaP + '_' + phiP + '_alt' + obslev + '_' + 'run' + run_number + '.corsika.tar.gz'
filetar1 = rundir + '/' + 'input'
filetar2 = rundir + '/' + 'DAT' + run_number + '.dbase'
filetar3 = rundir + '/run' + str(int(run_number)) + '.log'
cmdTuple = [
'/bin/tar', 'zcf', corsikaTarName, filetar1, filetar2, filetar3
]
DIRAC.gLogger.notice('Executing command tuple:', cmdTuple)
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute tar')
DIRAC.exit(-1)
######################################################
corsikaOutFileDir = os.path.join(corsikaDirPath, particle, 'Data',
runNumSeriesDir)
corsikaOutFileLFN = os.path.join(corsikaOutFileDir, corsikaFileName)
corsikaRunNumberSeriesDirExist = fcc.isDirectory(
corsikaOutFileDir)['Value']['Successful'][corsikaOutFileDir]
newCorsikaRunNumberSeriesDir = (
corsikaRunNumberSeriesDirExist != True
) # if new runFileSeries, will need to add new MD
#### create a file to DISABLE_WATCHDOG_CPU_WALLCLOCK_CHECK ################
f = open('DISABLE_WATCHDOG_CPU_WALLCLOCK_CHECK', 'w')
f.close()
if savecorsika == 'True':
DIRAC.gLogger.notice('Put and register corsika File in LFC and DFC:',
corsikaOutFileLFN)
ret = dirac.addFile(corsikaOutFileLFN, corsikaFileName,
storage_element)
res = CheckCatalogCoherence(corsikaOutFileLFN)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Job failed: Catalog Coherence problem found')
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Error during addFile call:', ret['Message'])
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
# put and register corsikaTarFile:
corsikaTarFileDir = os.path.join(corsikaDirPath, particle, 'Log',
runNumSeriesDir)
corsikaTarFileLFN = os.path.join(corsikaTarFileDir, corsikaTarName)
##### If storage element is IN2P3-tape save simtel file on disk ###############
if storage_element == 'CC-IN2P3-Tape':
storage_element = 'CC-IN2P3-Disk'
DIRAC.gLogger.notice(
'Put and register corsikaTar File in LFC and DFC:',
corsikaTarFileLFN)
ret = dirac.addFile(corsikaTarFileLFN, corsikaTarName, storage_element)
####Checking and restablishing catalog coherence #####################
res = CheckCatalogCoherence(corsikaTarFileLFN)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Job failed: Catalog Coherence problem found')
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Error during addFile call:', ret['Message'])
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
######################################################################
if newCorsikaRunNumberSeriesDir:
insertRunFileSeriesMD(corsikaOutFileDir, runNumTrunc)
insertRunFileSeriesMD(corsikaTarFileDir, runNumTrunc)
###### insert corsika File Level metadata ############################################
corsikaFileMD = {}
corsikaFileMD['runNumber'] = int(run_number)
corsikaFileMD['jobID'] = jobID
corsikaFileMD['corsikaReturnCode'] = corsikaReturnCode
corsikaFileMD['nbShowers'] = nbShowers
result = fcc.setMetadata(corsikaOutFileLFN, corsikaFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(corsikaTarFileLFN, corsikaFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
##### Exit now if only corsika simulation required
if (mode == 'corsika_standalone'):
DIRAC.exit()
############ Producing SimTel File
######################Building simtel Directory Metadata #######################
cfg_dict = {
"4MSST": 'cta-prod2-4m-dc',
"SCSST": 'cta-prod2-sc-sst',
"STD": 'cta-prod2',
"NSBX3": 'cta-prod2',
"ASTRI": 'cta-prod2-astri',
"SCMST": 'cta-prod2-sc3',
"NORTH": 'cta-prod2n'
}
if simtelConfig == "6INROW":
all_configs = ["4MSST", "SCSST", "ASTRI", "NSBX3", "STD", "SCMST"]
elif simtelConfig == "5INROW":
all_configs = ["4MSST", "SCSST", "ASTRI", "NSBX3", "STD"]
elif simtelConfig == "3INROW":
all_configs = ["SCSST", "STD", "SCMST"]
else:
all_configs = [simtelConfig]
############################################
#for current_conf in all_configs:
#DIRAC.gLogger.notice('current conf is',current_conf)
#if current_conf == "SCMST":
#current_version = version + '_sc3'
#DIRAC.gLogger.notice('current version is', current_version)
#if os.path.isdir('sim_telarray'):
#DIRAC.gLogger.notice('Package found in the local area. Removing package...')
#cmd = 'rm -R sim_telarray corsika-6990 hessioxxx corsika-run'
#if(os.system(cmd)):
#DIRAC.exit( -1 )
#install_CorsikaSimtelPack(current_version)
#else:
#current_version = version
#DIRAC.gLogger.notice('current version is', current_version)
#############################################################
for current_conf in all_configs:
DIRAC.gLogger.notice('current conf is', current_conf)
if current_conf == "SCMST":
current_version = version + '_sc3'
DIRAC.gLogger.notice('current version is', current_version)
installSoftwareEnviron(CorsikaSimtelPack, workingArea(), 'sim-sc3')
else:
current_version = version
DIRAC.gLogger.notice('current version is', current_version)
########################################################
global simtelDirPath
global simtelProdVersion
simtelProdVersion = current_version + '_simtel'
simtelDirPath = os.path.join(corsikaParticleDirPath, simtelProdVersion)
resultCreateSimtelDirMD = createSimtelFileSystAndMD(current_conf)
if not resultCreateSimtelDirMD['OK']:
DIRAC.gLogger.error('Failed to create simtelArray Directory MD')
jobReport.setApplicationStatus(
'Failed to create simtelArray Directory MD')
DIRAC.gLogger.error(
'Metadata coherence problem, no simtelArray File produced')
DIRAC.exit(-1)
else:
DIRAC.gLogger.notice('simtel Directory MD successfully created')
############## check simtel data file LFN exists ########################
simtelFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.simtel.gz'
simtelDirPath_conf = simtelDirPath + '_' + current_conf
simtelOutFileDir = os.path.join(simtelDirPath_conf, 'Data',
runNumSeriesDir)
simtelOutFileLFN = os.path.join(simtelOutFileDir, simtelFileName)
res = CheckCatalogCoherence(simtelOutFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('Current conf already done', current_conf)
continue
#### execute simtelarray ################
fd = open('run_sim.sh', 'w')
fd.write("""#! /bin/sh
source ./Corsika_simhessarrayEnv.sh
export SVNPROD2=$PWD
export SVNTAG=SVN-PROD2_rev10503
export CORSIKA_IO_BUFFER=800MB
cp ../grid_prod2-repro.sh .
ln -s ../%s
ln -s ../$SVNTAG
./grid_prod2-repro.sh %s %s""" %
(corsikaFileName, corsikaFileName, current_conf))
fd.close()
####################################
os.system('chmod u+x run_sim.sh')
cmdTuple = ['./run_sim.sh']
ret = systemCall(0, cmdTuple, sendOutputSimTel)
simtelReturnCode, stdout, stderr = ret['Value']
if (os.system('grep Broken simtel.log') == 0):
DIRAC.gLogger.error('Broken string found in simtel.log')
jobReport.setApplicationStatus('Broken pipe')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute run_sim.sh')
DIRAC.gLogger.error('run_sim.sh status is:', simtelReturnCode)
DIRAC.exit(-1)
## check simtel data/log/histo Output File exist
cfg = cfg_dict[current_conf]
#cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Data/*.simtel.gz ' + simtelFileName
if current_conf == "SCMST":
cmdprefix = 'mv sim-sc3/Data/sim_telarray/' + cfg + '/0.0deg/'
else:
cmdprefix = 'mv sim/Data/sim_telarray/' + cfg + '/0.0deg/'
cmd = cmdprefix + 'Data/*' + cfg + '_*.simtel.gz ' + simtelFileName
if (os.system(cmd)):
DIRAC.exit(-1)
############################################
simtelRunNumberSeriesDirExist = fcc.isDirectory(
simtelOutFileDir)['Value']['Successful'][simtelOutFileDir]
newSimtelRunFileSeriesDir = (
simtelRunNumberSeriesDirExist != True
) # if new runFileSeries, will need to add new MD
simtelLogFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(obslev) + '_' + 'run' + run_number + '.log.gz'
#cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Log/*.log.gz ' + simtelLogFileName
cmd = cmdprefix + 'Log/*' + cfg + '_*.log.gz ' + simtelLogFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelOutLogFileDir = os.path.join(simtelDirPath_conf, 'Log',
runNumSeriesDir)
simtelOutLogFileLFN = os.path.join(simtelOutLogFileDir,
simtelLogFileName)
simtelHistFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.hdata.gz'
#cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Histograms/*.hdata.gz ' + simtelHistFileName
cmd = cmdprefix + 'Histograms/*' + cfg + '_*.hdata.gz ' + simtelHistFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelOutHistFileDir = os.path.join(simtelDirPath_conf, 'Histograms',
runNumSeriesDir)
simtelOutHistFileLFN = os.path.join(simtelOutHistFileDir,
simtelHistFileName)
########### quality check on Histo #############################################
fd = open('check_histo.sh', 'w')
fd.write("""#! /bin/sh
nsim=$(list_histograms %s|fgrep 'Histogram 6 '|sed 's/^.*contents: //'| sed 's:/.*$::')
nevents=%d
if [ $nsim -lt $(( $nevents - 20 )) ]; then
echo 'nsim found:' $nsim
echo 'nsim expected:' $nevents
exit 1
else
echo 'nsim found:' $nsim
echo 'nsim expected:' $nevents
fi
""" % (simtelHistFileName, int(nbShowers) * int(cscat)))
fd.close()
ret = getSoftwareEnviron(CorsikaSimtelPack)
if not ret['OK']:
error = ret['Message']
DIRAC.gLogger.error(error, CorsikaSimtelPack)
DIRAC.exit(-1)
corsikaEnviron = ret['Value']
os.system('chmod u+x check_histo.sh')
cmdTuple = ['./check_histo.sh']
DIRAC.gLogger.notice('Executing command tuple:', cmdTuple)
ret = systemCall(0, cmdTuple, sendOutput, env=corsikaEnviron)
checkHistoReturnCode, stdout, stderr = ret['Value']
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute check_histo.sh')
DIRAC.gLogger.error('check_histo.sh status is:',
checkHistoReturnCode)
DIRAC.exit(-1)
if (checkHistoReturnCode != 0):
DIRAC.gLogger.error('Failure during check_histo.sh')
DIRAC.gLogger.error('check_histo.sh status is:',
checkHistoReturnCode)
jobReport.setApplicationStatus('Histo check Failed')
DIRAC.exit(-1)
########## quality check on Log #############################
cmd = 'zcat %s | grep Finished.' % simtelLogFileName
DIRAC.gLogger.notice('Executing system call:', cmd)
if (os.system(cmd)):
jobReport.setApplicationStatus('Log check Failed')
DIRAC.exit(-1)
################################################
from DIRAC.Core.Utilities import List
from DIRAC.ConfigurationSystem.Client.Helpers.Operations import Operations
opsHelper = Operations()
global seList
seList = opsHelper.getValue('ProductionOutputs/SimtelProd', [])
seList = List.randomize(seList)
DIRAC.gLogger.notice('SeList is:', seList)
######### Upload simtel data/log/histo ##############################################
res = upload_to_seList(simtelOutFileLFN, simtelFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('OutputData Upload Error', simtelOutFileLFN)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
res = CheckCatalogCoherence(simtelOutLogFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('Log file already exists. Removing:',
simtelOutLogFileLFN)
ret = dirac.removeFile(simtelOutLogFileLFN)
res = upload_to_seList(simtelOutLogFileLFN, simtelLogFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Upload simtel Log Error', simtelOutLogFileLFN)
DIRAC.gLogger.notice('Removing simtel data file:',
simtelOutFileLFN)
ret = dirac.removeFile(simtelOutFileLFN)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
res = CheckCatalogCoherence(simtelOutHistFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('Histo file already exists. Removing:',
simtelOutHistFileLFN)
ret = dirac.removeFile(simtelOutHistFileLFN)
res = upload_to_seList(simtelOutHistFileLFN, simtelHistFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Upload simtel Histo Error',
simtelOutHistFileLFN)
DIRAC.gLogger.notice('Removing simtel data file:',
simtelOutFileLFN)
ret = dirac.removeFile(simtelOutFileLFN)
DIRAC.gLogger.notice('Removing simtel log file:',
simtelOutLogFileLFN)
ret = dirac.removeFile(simtelOutLogFileLFN)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
# simtelRunNumberSeriesDirExist = fcc.isDirectory(simtelOutFileDir)['Value']['Successful'][simtelOutFileDir]
# newSimtelRunFileSeriesDir = (simtelRunNumberSeriesDirExist != True) # if new runFileSeries, will need to add new MD
if newSimtelRunFileSeriesDir:
print 'insertRunFileSeriesMD'
insertRunFileSeriesMD(simtelOutFileDir, runNumTrunc)
insertRunFileSeriesMD(simtelOutLogFileDir, runNumTrunc)
insertRunFileSeriesMD(simtelOutHistFileDir, runNumTrunc)
else:
print 'NotinsertRunFileSeriesMD'
###### simtel File level metadata ############################################
simtelFileMD = {}
simtelFileMD['runNumber'] = int(run_number)
simtelFileMD['jobID'] = jobID
simtelFileMD['simtelReturnCode'] = simtelReturnCode
result = fcc.setMetadata(simtelOutFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(simtelOutLogFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(simtelOutHistFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
if savecorsika == 'True':
result = fcc.addFileAncestors(
{simtelOutFileLFN: {
'Ancestors': [corsikaOutFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.addFileAncestors(
{simtelOutLogFileLFN: {
'Ancestors': [corsikaOutFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.addFileAncestors(
{simtelOutHistFileLFN: {
'Ancestors': [corsikaOutFileLFN]
}})
print 'result addFileAncestor:', result
##### Exit now if only corsika simulation required
if (mode == 'corsika_simtel'):
continue
######### run read_cta #######################################
rcta = Read_CtaApp()
rcta.setSoftwarePackage(CorsikaSimtelPack)
rcta.rctaExe = 'read_cta'
powerlaw_dict = {
'gamma': '-2.57',
'gamma_ptsrc': '-2.57',
'proton': '-2.70',
'electron': '-3.21'
}
dstFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.simtel-dst0.gz'
dstHistoFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(
obslev) + '_' + 'run' + run_number + '.hdata-dst0.gz'
## added some options starting from Armazones_2K prod.
rcta.rctaArguments = [
'-r', '4', '-u', '--integration-scheme', '4',
'--integration-window', '7,3', '--tail-cuts', '6,8', '--min-pix',
'2', '--min-amp', '20', '--type', '1,0,0,400', '--tail-cuts',
'9,12', '--min-amp', '20', '--type', '2,0,0,100', '--tail-cuts',
'8,11', '--min-amp', '19', '--type', '3,0,0,40', '--tail-cuts',
'6,9', '--min-amp', '15', '--type', '4,0,0,15', '--tail-cuts',
'3.7,5.5', '--min-amp', '8', '--type', '5,0,0,70,5.6',
'--tail-cuts', '2.4,3.2', '--min-amp', '5.6', '--dst-level', '0',
'--dst-file', dstFileName, '--histogram-file', dstHistoFileName,
'--powerlaw', powerlaw_dict[particle], simtelFileName
]
rctaReturnCode = rcta.execute()
if rctaReturnCode != 0:
DIRAC.gLogger.error('read_cta Application: Failed')
jobReport.setApplicationStatus('read_cta Application: Failed')
DIRAC.exit(-1)
######## run dst quality checks ######################################
fd = open('check_dst_histo.sh', 'w')
fd.write("""#! /bin/sh
dsthistfilename=%s
dstfile=%s
n6="$(list_histograms -h 6 ${dsthistfilename} | grep 'Histogram of type' | sed 's/.*bins, //' | sed 's/ entries.//')"
n12001="$(list_histograms -h 12001 ${dsthistfilename} | grep 'Histogram of type' | sed 's/.*bins, //' | sed 's/ entries.//')"
if [ $n6 -ne $n12001 ]; then
echo 'n6 found:' $n6
echo 'n12001 found:' $n12001
exit 1
else
echo 'n6 found:' $n6
echo 'n12001 found:' $n12001
fi
n12002="$(list_histograms -h 12002 ${dsthistfilename} | grep 'Histogram of type' | sed 's/.*bins, //' | sed 's/ entries.//')"
nev="$(statio ${dstfile} | egrep '^2010' | cut -f2)"
if [ -z "$nev" ]; then nev="0"; fi
if [ $nev -ne $n12002 ]; then
echo 'nev found:' $nev
echo 'n12002 found:' $n12002
exit 1
else
echo 'nev found:' $nev
echo 'n12002 found:' $n12002
fi
""" % (dstHistoFileName, dstFileName))
fd.close()
os.system('chmod u+x check_dst_histo.sh')
cmdTuple = ['./check_dst_histo.sh']
DIRAC.gLogger.notice('Executing command tuple:', cmdTuple)
ret = systemCall(0, cmdTuple, sendOutput, env=corsikaEnviron)
checkHistoReturnCode, stdout, stderr = ret['Value']
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute check_dst_histo.sh')
DIRAC.gLogger.error('check_dst_histo.sh status is:',
checkHistoReturnCode)
DIRAC.exit(-1)
if (checkHistoReturnCode != 0):
DIRAC.gLogger.error('Failure during check_dst_histo.sh')
DIRAC.gLogger.error('check_dst_histo.sh status is:',
checkHistoReturnCode)
jobReport.setApplicationStatus('Histo check Failed')
DIRAC.exit(-1)
############create MD and upload dst data/histo ##########################################################
global dstDirPath
global dstProdVersion
dstProdVersion = current_version + '_dst'
dstDirPath = os.path.join(simtelDirPath_conf, dstProdVersion)
dstOutFileDir = os.path.join(dstDirPath, 'Data', runNumSeriesDir)
dstOutFileLFN = os.path.join(dstOutFileDir, dstFileName)
resultCreateDstDirMD = createDstFileSystAndMD()
if not resultCreateDstDirMD['OK']:
DIRAC.gLogger.error('Failed to create Dst Directory MD')
jobReport.setApplicationStatus('Failed to create Dst Directory MD')
DIRAC.gLogger.error(
'Metadata coherence problem, no Dst File produced')
DIRAC.exit(-1)
else:
DIRAC.gLogger.notice('Dst Directory MD successfully created')
############################################################
res = CheckCatalogCoherence(dstOutFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('dst file already exists. Removing:',
dstOutFileLFN)
ret = dirac.removeFile(dstOutFileLFN)
res = upload_to_seList(dstOutFileLFN, dstFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Upload dst Error', dstOutFileLFN)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
##############################################################
dstHistoFileDir = os.path.join(dstDirPath, 'Histograms',
runNumSeriesDir)
dstHistoFileLFN = os.path.join(dstHistoFileDir, dstHistoFileName)
res = CheckCatalogCoherence(dstHistoFileLFN)
if res == DIRAC.S_OK:
DIRAC.gLogger.notice('dst histo file already exists. Removing:',
dstHistoFileLFN)
ret = dirac.removeFile(dstHistoFileLFN)
res = upload_to_seList(dstHistoFileLFN, dstHistoFileName)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Upload dst Error', dstHistoFileName)
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
########### Insert RunNumSeries MD ##########################
dstRunNumberSeriesDirExist = fcc.isDirectory(
dstOutFileDir)['Value']['Successful'][dstOutFileDir]
newDstRunFileSeriesDir = (
dstRunNumberSeriesDirExist != True
) # if new runFileSeries, will need to add new MD
if newDstRunFileSeriesDir:
insertRunFileSeriesMD(dstOutFileDir, runNumTrunc)
insertRunFileSeriesMD(dstHistoFileDir, runNumTrunc)
####### dst File level metadata ###############################################
dstFileMD = {}
dstFileMD['runNumber'] = int(run_number)
dstFileMD['jobID'] = jobID
dstFileMD['rctaReturnCode'] = rctaReturnCode
result = fcc.setMetadata(dstOutFileLFN, dstFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(dstHistoFileLFN, dstFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
########## set the ancestors for dst #####################################
result = fcc.addFileAncestors(
{dstOutFileLFN: {
'Ancestors': [simtelOutFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.addFileAncestors(
{dstHistoFileLFN: {
'Ancestors': [simtelOutFileLFN]
}})
print 'result addFileAncestor:', result
######################################################
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
Script.registerSwitch("p:", "inputfile=", "Input File")
Script.registerSwitch("S:", "simtelConfig=", "SimtelConfig")
Script.registerSwitch("V:", "version=", "Version (Use setVersion)")
Script.registerSwitch("C:", "comp=", "Compile (True/False)")
Script.parseCommandLine(ignoreErrors=True)
## default values ##############
simtelConfig = None
version = None
comp = True
### set switch values ###
for switch in Script.getUnprocessedSwitches():
if switch[0] == "inputfile" or switch[0] == "p":
corsikaFileLFN = switch[1].split('ParametricInputData=LFN:')[1]
elif switch[0] == "simtelConfig" or switch[0] == "S":
simtelConfig = switch[1]
elif switch[0] == "version" or switch[0] == "V":
version = switch[1]
elif switch[0] == "comp" or switch[0] == "C":
comp = switch[1]
if version == None:
Script.showHelp()
jobReport.setApplicationStatus('Missing options')
DIRAC.exit(-1)
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
############ Producing SimTel File
if comp == True:
install_CorsikaSimtelPack(version)
else:
CorsikaSimtelPack = 'corsika_simhessarray/' + version + '/corsika_simhessarray'
res = installSoftwarePackage(CorsikaSimtelPack, workingArea())
if not res['OK']:
DIRAC.gLogger.error('Failed to execute installSoftwarePackage',
res)
CorsikaSimtelPack = 'corsika_simhessarray/' + version + '/corsika_simhessarray'
cfg_dict = {
"4MSST": 'cta-prod2-4m-dc',
"SCSST": 'cta-prod2-sc-sst',
"STD": 'cta-prod2',
"NSBX3": 'cta-prod2',
"ASTRI": 'cta-prod2-astri',
"NORTH": 'cta-prod2n',
"ASTRISLN": 'cta-astri-sln'
}
#if simtelConfig=="6INROW":
# all_configs=["4MSST","SCSST","ASTRI","NSBX3","STD","SCMST"]
#elif simtelConfig=="5INROW":
# all_configs=["4MSST","SCSST","ASTRI","NSBX3","STD"]
#else:
# all_configs=[simtelConfig]
all_configs = [simtelConfig]
for current_conf in all_configs:
DIRAC.gLogger.notice('current conf is', current_conf)
current_version = version
DIRAC.gLogger.notice('current version is', current_version)
#if current_conf == "SCMST":
# current_version = version + '_sc3'
# DIRAC.gLogger.notice('current version is', current_version)
# if os.path.isdir('sim_telarray'):
# DIRAC.gLogger.notice('Package found in the local area. Removing package...')
# cmd = 'rm -R sim_telarray corsika-6990 hessioxxx corsika-run'
# if(os.system(cmd)):
# DIRAC.exit( -1 )
# install_CorsikaSimtelPack(current_version)
#else:
# current_version = version
# DIRAC.gLogger.notice('current version is', current_version)
#### execute simtelarray ################
fd = open('run_sim.sh', 'w')
fd.write("""#! /bin/sh
export SVNPROD2=$PWD
export SVNTAG=SVN-PROD2
export CORSIKA_IO_BUFFER=800MB
./grid_prod2-repro.sh %s %s""" %
(os.path.basename(corsikaFileLFN), current_conf))
fd.close()
####################################
os.system('chmod u+x run_sim.sh')
os.system('chmod u+x grid_prod2-repro.sh')
cmdTuple = ['./run_sim.sh']
ret = systemCall(0, cmdTuple, sendSimtelOutput)
simtelReturnCode, stdout, stderr = ret['Value']
if (os.system('grep Broken simtel.log') == 0):
DIRAC.gLogger.error('Broken string found in simtel.log')
jobReport.setApplicationStatus('Broken pipe')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute run_sim.sh')
DIRAC.gLogger.error('run_sim.sh status is:', simtelReturnCode)
DIRAC.exit(-1)
## check simtel data/log/histo Output File exist
cfg = cfg_dict[current_conf]
simtelFileName = os.path.basename(corsikaFileLFN).replace(
'corsika.gz', 'simtel.gz')
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Data/*.simtel.gz ' + simtelFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelLogFileName = simtelFileName.replace('simtel.gz', 'log.gz')
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Log/*.log.gz ' + simtelLogFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelHistFileName = simtelFileName.replace('simtel.gz', 'hdata.gz')
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Histograms/*.hdata.gz ' + simtelHistFileName
if (os.system(cmd)):
DIRAC.exit(-1)
################################################################
DIRAC.exit()
'''
Created on 2015-05-19 21:45:37
@author: suo
'''
import sys
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
from DIRAC.Core.Base import Script
Script.parseCommandLine( ignoreErrors = False )
jobID = sys.argv[1]
experiment = sys.argv[2]
message = sys.argv[3]
jobReport = JobReport(jobID,experiment)
result = jobReport.setApplicationStatus(message)
if not result['OK']:
try:
with open('job.err','a') as errFile:
print >> errFile, 'setJobStatus error: %s' % result
except IOError:
print 'IOError:',str(e)
def main():
from DIRAC.Core.Base import Script
### make_CTA_DST options ###############################################
Script.registerSwitch("T:", "tellist=", "Tellist", setTellist)
Script.registerSwitch("N:", "nevent=", "Nevent", setNevent)
Script.registerSwitch("p:", "run_number=",
"Run Number (set automatically)", setRunNumber)
### other options ###############################################
Script.registerSwitch("V:", "version=", "HAP version", setVersion)
Script.parseCommandLine(ignoreErrors=True)
args = Script.getPositionalArgs()
if len(args) < 1:
Script.showHelp()
if tellist == None or version == None:
Script.showHelp()
jobReport.setApplicationStatus('Options badly specified')
DIRAC.exit(-1)
from CTADIRAC.Core.Workflow.Modules.HapRootMacro import HapRootMacro
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import getSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
HapPack = 'HAP/' + version + '/HAP'
packs = ['HESS/v0.2/lib', 'HESS/v0.3/root', HapPack]
for package in packs:
DIRAC.gLogger.notice('Checking:', package)
if sharedArea:
if checkSoftwarePackage(package, sharedArea())['OK']:
DIRAC.gLogger.notice('Package found in Shared Area:', package)
continue
if localArea:
if checkSoftwarePackage(package, localArea())['OK']:
DIRAC.gLogger.notice('Package found in Local Area:', package)
continue
if installSoftwarePackage(package, localArea())['OK']:
continue
DIRAC.gLogger.error('Check Failed for software package:', package)
DIRAC.gLogger.error('Software package not available')
DIRAC.exit(-1)
hr = HapRootMacro()
hr.setSoftwarePackage(HapPack)
telconf = os.path.join(localArea(),
'HAP/%s/config/%s' % (version, tellist))
infile = build_infile()
infilestr = '"' + infile + '"'
telconfstr = '"' + telconf + '"'
args = [str(int(run_number)), infilestr, telconfstr]
try:
args.extend([nevent])
except NameError:
DIRAC.gLogger.info('nevent arg not used')
DIRAC.gLogger.notice('make_CTA_DST macro Arguments:', args)
hr.rootMacro = '/hapscripts/dst/make_CTA_DST.C+'
hr.rootArguments = args
DIRAC.gLogger.notice('Executing Hap make_CTA_DST macro')
res = hr.execute()
if not res['OK']:
DIRAC.gLogger.error('Failed to execute make_CTA_DST macro')
jobReport.setApplicationStatus('Failure during make_CTA_DST')
DIRAC.exit(-1)
############ check existance of output file ####
filedst = 'dst_CTA_%08d' % int(run_number) + '.root'
if not os.path.isfile(filedst):
DIRAC.gLogger.error('dst file not found:', filedst)
jobReport.setApplicationStatus('make_CTA_DST.C: DST file not created')
DIRAC.exit(-1)
fileout = 'dst_' + part_type + '_run' + run_number + '.root'
cmd = 'mv ' + filedst + ' ' + fileout
os.system(cmd)
###################Check std out #############################
DIRAC.gLogger.notice('Executing DST Check step0')
ret = getSoftwareEnviron(HapPack)
if not ret['OK']:
error = ret['Message']
DIRAC.gLogger.error(error, HapPack)
DIRAC.exit(-1)
hapEnviron = ret['Value']
hessroot = hapEnviron['HESSROOT']
check_script = hessroot + '/hapscripts/dst/check_dst0.csh'
cmdTuple = [check_script]
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute DST Check step0')
jobReport.setApplicationStatus('Check_dst0: Failed')
DIRAC.exit(-1)
status, stdout, stderr = ret['Value']
if status == 1:
jobReport.setApplicationStatus(
'Check_dst0: Big problem during the DST production')
DIRAC.gLogger.error(
'DST Check step0 reports: Big problem during the DST production')
DIRAC.exit(-1)
if status == 2:
jobReport.setApplicationStatus('Check_dst0: No triggered events')
DIRAC.gLogger.notice('DST Check step0 reports: No triggered events')
DIRAC.exit()
############# run the CheckDST macro #################
DIRAC.gLogger.notice('Executing DST check step1')
hr.rootMacro = '/hapscripts/dst/CheckDST.C+'
fileoutstr = '"' + fileout + '"'
args = [fileoutstr]
DIRAC.gLogger.notice('CheckDST macro Arguments:', args)
hr.rootArguments = args
DIRAC.gLogger.notice('Executing Hap CheckDST macro')
res = hr.execute()
if not res['OK']:
DIRAC.gLogger.error('Failure during DST Check step1')
jobReport.setApplicationStatus('Check_dst1: Failed')
DIRAC.exit(-1)
#######################Check std out of CheckDST macro ##########################
DIRAC.gLogger.notice('Executing DST Check step2')
check_script = hessroot + '/hapscripts/dst/check_dst2.csh'
cmdTuple = [check_script]
ret = systemCall(0, cmdTuple, sendOutput)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute DST Check step2')
jobReport.setApplicationStatus('Check_dst2: Failed')
DIRAC.exit(-1)
status, stdout, stderr = ret['Value']
if status == 1:
jobReport.setApplicationStatus(
'DST Check step2: Big problem during the DST production')
DIRAC.gLogger.error(
'DST Check step2 reports: Big problem during the DST production')
DIRAC.exit(-1)
if status == 2:
jobReport.setApplicationStatus('DST Check step2: No triggered events')
DIRAC.gLogger.notice('DST Check step2 reports: No triggered events')
DIRAC.exit()
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
### DoCtaIrf options ##########################################################
Script.registerSwitch("A:", "analysis=", "Analysis Type", setAnalysisType)
Script.registerSwitch("C:", "cuts=", "Cuts Config", setCutsConfig)
Script.registerSwitch("R:", "runlist=", "Runlist", setRunlist)
Script.registerSwitch("Z:", "zenith=", "Zenith", setZenith)
Script.registerSwitch("O:", "offset=", "Offset", setOffset)
Script.registerSwitch("M:", "energy=", "Energy Method", setEnergyMethod)
Script.registerSwitch("T:", "arrayconfig=", "Array Configuration",
setArrayConfig)
Script.registerSwitch("P:", "particle=", "Particle Type", setParticleType)
## other options
Script.registerSwitch("V:", "version=", "HAP version", setVersion)
Script.parseCommandLine(ignoreErrors=True)
args = Script.getPositionalArgs()
if len(args) < 1:
Script.showHelp()
from CTADIRAC.Core.Workflow.Modules.HapApplication import HapApplication
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import getSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
ha = HapApplication()
HapPack = 'HAP/' + version + '/HAP'
packs = ['HESS/v0.2/lib', 'HESS/v0.3/root', HapPack]
for package in packs:
DIRAC.gLogger.notice('Checking:', package)
if sharedArea:
if checkSoftwarePackage(package, sharedArea())['OK']:
DIRAC.gLogger.notice('Package found in Shared Area:', package)
continue
if localArea:
if checkSoftwarePackage(package, localArea())['OK']:
DIRAC.gLogger.notice('Package found in Local Area:', package)
continue
if installSoftwarePackage(package, localArea())['OK']:
continue
DIRAC.gLogger.error('Check Failed for software package:', package)
DIRAC.gLogger.error('Software package not available')
DIRAC.exit(-1)
ha.setSoftwarePackage(HapPack)
ha.hapExecutable = 'DoCtaIrf'
runlistdir = os.environ['PWD']
build_infile(runlist)
ha.hapArguments = [
analysistype, cutsconfig, runlistdir, runlist, zenith, offset,
arrayconfig, energymethod, particle
]
DIRAC.gLogger.notice('Executing Hap Application')
res = ha.execute()
if not res['OK']:
DIRAC.gLogger.error('Failed to execute Hap Application')
jobReport.setApplicationStatus('Hap Application: Failed')
DIRAC.exit(-1)
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
Script.registerSwitch("p:", "inputfile=", "Input File", setInputFile)
Script.registerSwitch("E:", "simtelExecName=", "SimtelExecName",
setExecutable)
Script.registerSwitch("S:", "simtelConfig=", "SimtelConfig", setConfig)
Script.registerSwitch("V:", "version=", "Version", setVersion)
Script.registerSwitch("D:", "storage_element=", "Storage Element",
setStorageElement)
from DIRAC.Resources.Catalog.FileCatalogClient import FileCatalogClient
from DIRAC.Resources.Catalog.FileCatalog import FileCatalog
Script.parseCommandLine()
DIRAC.gLogger.setLevel('INFO')
global fcc, fcL, storage_element
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import localArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int(jobID)
jobReport = JobReport(jobID)
CorsikaSimtelPack = 'corsika_simhessarray/' + version + '/corsika_simhessarray'
packs = [CorsikaSimtelPack]
for package in packs:
DIRAC.gLogger.notice('Checking:', package)
if sharedArea:
if checkSoftwarePackage(package, sharedArea())['OK']:
DIRAC.gLogger.notice('Package found in Shared Area:', package)
installSoftwareEnviron(package, workingArea())
packageTuple = package.split('/')
corsika_subdir = sharedArea(
) + '/' + packageTuple[0] + '/' + version
cmd = 'cp -u -r ' + corsika_subdir + '/* .'
os.system(cmd)
continue
DIRAC.gLogger.error('Check Failed for software package:', package)
DIRAC.gLogger.error('Software package not available')
DIRAC.exit(-1)
###########
## Checking MD coherence
fc = FileCatalog('LcgFileCatalog')
res = fc._getCatalogConfigDetails('DIRACFileCatalog')
print 'DFC CatalogConfigDetails:', res
res = fc._getCatalogConfigDetails('LcgFileCatalog')
print 'LCG CatalogConfigDetails:', res
fcc = FileCatalogClient()
fcL = FileCatalog('LcgFileCatalog')
from DIRAC.Interfaces.API.Dirac import Dirac
dirac = Dirac()
############################
#############
# CLAUDIA: simtelConfigFile should be built from ???
#simtelConfigFilesPath = 'sim_telarray/multi'
#simtelConfigFile = simtelConfigFilesPath + '/multi_cta-ultra5.cfg'
#createGlobalsFromConfigFiles(simtelConfigFile)
createGlobalsFromConfigFiles()
#######################
## files spread in 1000-runs subDirectories
corsikaFileName = os.path.basename(corsikaFileLFN)
run_number = corsikaFileName.split('run')[1].split('.corsika.gz')[
0] # run001412.corsika.gz
runNum = int(run_number)
subRunNumber = '%03d' % runNum
runNumModMille = runNum % 1000
runNumTrunc = (runNum - runNumModMille) / 1000
runNumSeriesDir = '%03dxxx' % runNumTrunc
print 'runNumSeriesDir=', runNumSeriesDir
f = open('DISABLE_WATCHDOG_CPU_WALLCLOCK_CHECK', 'w')
f.close()
##### If storage element is IN2P3-tape save simtel file on disk ###############
if storage_element == 'CC-IN2P3-Tape':
storage_element = 'CC-IN2P3-Disk'
############ Producing SimTel File
######################Building simtel Directory Metadata #######################
resultCreateSimtelDirMD = createSimtelFileSystAndMD()
if not resultCreateSimtelDirMD['OK']:
DIRAC.gLogger.error('Failed to create simtelArray Directory MD')
jobReport.setApplicationStatus(
'Failed to create simtelArray Directory MD')
DIRAC.gLogger.error(
'Metadata coherence problem, no simtelArray File produced')
DIRAC.exit(-1)
else:
print 'simtel Directory MD successfully created'
#### execute simtelarray ################
# fd = open('run_sim.sh', 'w' )
# fd.write( """#! /bin/sh
#echo "go for sim_telarray"
#. ./examples_common.sh
#export CORSIKA_IO_BUFFER=800MB
#zcat %s | $SIM_TELARRAY_PATH/run_sim_%s""" % (corsikaFileName, simtelExecName))
# fd.close()
#### execute simtelarray ################
fd = open('run_sim.sh', 'w')
fd.write("""#! /bin/sh
export SVNPROD2=$PWD
export SVNTAG=SVN-PROD2
export CORSIKA_IO_BUFFER=800MB
./grid_prod2-repro.sh %s %s""" % (corsikaFileName, simtelConfig))
fd.close()
os.system('chmod u+x run_sim.sh')
cmdTuple = ['./run_sim.sh']
ret = systemCall(0, cmdTuple, sendOutputSimTel)
simtelReturnCode, stdout, stderr = ret['Value']
if (os.system('grep Broken simtel.log')):
print 'not broken'
else:
print 'broken'
# Tag corsika File if Broken Pipe
corsikaTagMD = {}
corsikaTagMD['CorsikaToReprocess'] = 'CorsikaToReprocess'
result = fcc.setMetadata(corsikaFileLFN, corsikaTagMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
jobReport.setApplicationStatus('Broken pipe')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Failed to execute run_sim.sh')
DIRAC.gLogger.error('run_sim.sh status is:', simtelReturnCode)
DIRAC.exit(-1)
## putAndRegister simtel data/log/histo Output File:
simtelFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(obslev) + '_' + 'run' + run_number + '.simtel.gz'
cfg = simtelExecName
if simtelExecName == "cta-prod2-nsbx3":
cfg = "cta-prod2"
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Data/*.simtel.gz ' + simtelFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelOutFileDir = os.path.join(simtelDirPath, 'Data', runNumSeriesDir)
simtelOutFileLFN = os.path.join(simtelOutFileDir, simtelFileName)
simtelRunNumberSeriesDirExist = fcc.isDirectory(
simtelOutFileDir)['Value']['Successful'][simtelOutFileDir]
newSimtelRunFileSeriesDir = (
simtelRunNumberSeriesDirExist != True
) # if new runFileSeries, will need to add new MD
simtelLogFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(obslev) + '_' + 'run' + run_number + '.log.gz'
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Log/*.log.gz ' + simtelLogFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelOutLogFileDir = os.path.join(simtelDirPath, 'Log', runNumSeriesDir)
simtelOutLogFileLFN = os.path.join(simtelOutLogFileDir, simtelLogFileName)
simtelHistFileName = particle + '_' + str(thetaP) + '_' + str(
phiP) + '_alt' + str(obslev) + '_' + 'run' + run_number + '.hdata.gz'
cmd = 'mv Data/sim_telarray/' + cfg + '/0.0deg/Histograms/*.hdata.gz ' + simtelHistFileName
if (os.system(cmd)):
DIRAC.exit(-1)
simtelOutHistFileDir = os.path.join(simtelDirPath, 'Histograms',
runNumSeriesDir)
simtelOutHistFileLFN = os.path.join(simtelOutHistFileDir,
simtelHistFileName)
################################################
DIRAC.gLogger.notice('Put and register simtel File in LFC and DFC:',
simtelOutFileLFN)
ret = dirac.addFile(simtelOutFileLFN, simtelFileName, storage_element)
res = CheckCatalogCoherence(simtelOutFileLFN)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Job failed: Catalog Coherence problem found')
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Error during addFile call:', ret['Message'])
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
######################################################################
DIRAC.gLogger.notice('Put and register simtel Log File in LFC and DFC:',
simtelOutLogFileLFN)
ret = dirac.addFile(simtelOutLogFileLFN, simtelLogFileName,
storage_element)
res = CheckCatalogCoherence(simtelOutLogFileLFN)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Job failed: Catalog Coherence problem found')
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Error during addFile call:', ret['Message'])
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
######################################################################
DIRAC.gLogger.notice('Put and register simtel Histo File in LFC and DFC:',
simtelOutHistFileLFN)
ret = dirac.addFile(simtelOutHistFileLFN, simtelHistFileName,
storage_element)
res = CheckCatalogCoherence(simtelOutHistFileLFN)
if res != DIRAC.S_OK:
DIRAC.gLogger.error('Job failed: Catalog Coherence problem found')
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
if not ret['OK']:
DIRAC.gLogger.error('Error during addFile call:', ret['Message'])
jobReport.setApplicationStatus('OutputData Upload Error')
DIRAC.exit(-1)
######################################################################
if newSimtelRunFileSeriesDir:
insertRunFileSeriesMD(simtelOutFileDir, runNumTrunc)
insertRunFileSeriesMD(simtelOutLogFileDir, runNumTrunc)
insertRunFileSeriesMD(simtelOutHistFileDir, runNumTrunc)
###### simtel File level metadata ############################################
simtelFileMD = {}
simtelFileMD['runNumber'] = int(run_number)
simtelFileMD['jobID'] = jobID
simtelFileMD['simtelReturnCode'] = simtelReturnCode
result = fcc.setMetadata(simtelOutFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(simtelOutLogFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.setMetadata(simtelOutHistFileLFN, simtelFileMD)
print "result setMetadata=", result
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
result = fcc.addFileAncestors(
{simtelOutFileLFN: {
'Ancestors': [corsikaFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.addFileAncestors(
{simtelOutLogFileLFN: {
'Ancestors': [corsikaFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.addFileAncestors(
{simtelOutHistFileLFN: {
'Ancestors': [corsikaFileLFN]
}})
print 'result addFileAncestor:', result
result = fcc.setMetadata(simtelOutFileLFN, simtelFileMD)
if not result['OK']:
print 'ResultSetMetadata:', result['Message']
DIRAC.exit()
def main():
from DIRAC.Core.Base import Script
Script.initialize()
DIRAC.gLogger.notice('Platform is:')
os.system('dirac-platform')
from DIRAC.DataManagementSystem.Client.DataManager import DataManager
from CTADIRAC.Core.Workflow.Modules.EvnDispApp import EvnDispApp
from CTADIRAC.Core.Utilities.SoftwareInstallation import checkSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwarePackage
from CTADIRAC.Core.Utilities.SoftwareInstallation import installSoftwareEnviron
from CTADIRAC.Core.Utilities.SoftwareInstallation import sharedArea
from CTADIRAC.Core.Utilities.SoftwareInstallation import workingArea
from DIRAC.Core.Utilities.Subprocess import systemCall
from DIRAC.WorkloadManagementSystem.Client.JobReport import JobReport
jobID = os.environ['JOBID']
jobID = int( jobID )
jobReport = JobReport( jobID )
version = sys.argv[3]
DIRAC.gLogger.notice( 'Version:', version )
EvnDispPack = os.path.join('evndisplay',version,'evndisplay')
packs = [EvnDispPack]
for package in packs:
DIRAC.gLogger.notice( 'Checking:', package )
if checkSoftwarePackage( package, sharedArea() )['OK']:
DIRAC.gLogger.notice( 'Package found in Shared Area:', package )
installSoftwareEnviron( package, sharedArea() )
# cmd = 'cp -r ' + os.path.join(sharedArea(),'evndisplay',version,'EVNDISP.CTA.runparameter') + ' .'
# if(os.system(cmd)):
# DIRAC.exit( -1 )
# cmd = 'cp -r ' + os.path.join(sharedArea(),'evndisplay',version,'Calibration') + ' .'
# if(os.system(cmd)):
# DIRAC.exit( -1 )
continue
else:
installSoftwarePackage( package, workingArea() )
DIRAC.gLogger.notice( 'Package found in workingArea:', package )
continue
DIRAC.gLogger.error( 'Check Failed for software package:', package )
DIRAC.gLogger.error( 'Software package not available')
DIRAC.exit( -1 )
ed = EvnDispApp()
ed.setSoftwarePackage(EvnDispPack)
########## Use of trg mask file #######################
usetrgfile = sys.argv[7]
DIRAC.gLogger.notice( 'Usetrgfile:', usetrgfile )
####### Use of multiple inputs per job ###
simtelFileLFNList = sys.argv[-1].split('ParametricParameters={')[1].split('}')[0].replace(',',' ')
# first element of the list
simtelFileLFN = simtelFileLFNList.split(' ')[0]
## convert the string into a list and get the basename
simtelFileList = []
for word in simtelFileLFNList.split():
simtelFileList.append(os.path.basename(word))
#### Parse the Layout List #################
layoutList = parseLayoutList(sys.argv[9])
#############################################
#### Loop over the Layout List #################
for layout in layoutList:
args = []
########## download trg mask file #######################
if usetrgfile == 'True':
trgmaskFileLFN = simtelFileLFN.replace( 'simtel.gz', 'trgmask.gz' )
DIRAC.gLogger.notice( 'Trying to download the trgmask File', trgmaskFileLFN )
result = DataManager().getFile( trgmaskFileLFN )
if not result['OK']:
DIRAC.gLogger.error( 'Failed to download trgmakfile:', result )
jobReport.setApplicationStatus( 'Trgmakfile download Error' )
DIRAC.exit( -1 )
args.extend( ['-t', os.path.basename( trgmaskFileLFN )] )
############################################################
###### execute evndisplay converter ##################
executable = sys.argv[5]
############ dst file Name ############################
run_number = simtelFileList[-1].split( 'run' )[1].split( '.simtel.gz' )[0]
runNum = int( run_number )
subRunNumber = '%06d' % runNum
particle = simtelFileList[-1].split( '_' )[0]
if 'ptsrc' in simtelFileList[-1]:
particle = particle + '_' + 'ptsrc'
dstfile = particle + '_run' + subRunNumber + '_' + str( jobID ) + '_' + os.path.basename( layout ) + '_dst.root'
###########################################
logfileName = executable + '_' + layout + '.log'
layout = os.path.join( 'EVNDISP.CTA.runparameter/DetectorGeometry', layout )
DIRAC.gLogger.notice( 'Layout is:', layout )
# add other arguments for evndisplay converter specified by user ######
converterparfile = open( 'converter.par', 'r' ).readlines()
for line in converterparfile:
for word in line.split():
args.append( word )
#########################################################
args.extend( ['-a', layout] )
args.extend( ['-o', dstfile] )
args.extend( simtelFileList )
execute_module( ed, executable, args )
########### check existence of DST file ###############
if not os.path.isfile( dstfile ):
DIRAC.gLogger.error( 'DST file Missing:', dstfile )
jobReport.setApplicationStatus( 'DST file Missing' )
DIRAC.exit( -1 )
########### quality check on Log #############################################
cmd = 'mv ' + executable + '.log' + ' ' + logfileName
if( os.system( cmd ) ):
DIRAC.exit( -1 )
fd = open( 'check_log.sh', 'w' )
fd.write( """#! /bin/sh
MCevts=$(grep writing %s | grep "MC events" | awk '{print $2}')
if [ $MCevts -gt 0 ]; then
exit 0
else
echo "MCevts is zero"
exit -1
fi
""" % (logfileName))
fd.close()
os.system( 'chmod u+x check_log.sh' )
cmd = './check_log.sh'
DIRAC.gLogger.notice( 'Executing system call:', cmd )
if( os.system( cmd ) ):
jobReport.setApplicationStatus( 'Converter Log Check Failed' )
DIRAC.exit( -1 )
#### Check the mode #################
mode = sys.argv[11]
if( mode == 'convert_standalone' ):
#DIRAC.exit()
continue
###### execute evndisplay stage1 ###############
executable = 'evndisp'
logfileName = executable + '_' + os.path.basename( layout ) + '.log'
args = ['-sourcefile', dstfile, '-outputdirectory', 'outdir']
# add other arguments for evndisp specified by user ######
evndispparfile = open( 'evndisp.par', 'r' ).readlines()
for line in evndispparfile:
for word in line.split():
args.append( word )
execute_module( ed, executable, args )
for name in glob.glob( 'outdir/*.root' ):
evndispOutFile = name.split( '.root' )[0] + '_' + str( jobID ) + '_' + os.path.basename( layout ) + '_evndisp.root'
cmd = 'mv ' + name + ' ' + os.path.basename( evndispOutFile )
if( os.system( cmd ) ):
DIRAC.exit( -1 )
########### quality check on Log #############################################
cmd = 'mv ' + executable + '.log' + ' ' + logfileName
if( os.system( cmd ) ):
DIRAC.exit( -1 )
fd = open( 'check_log.sh', 'w' )
fd.write( """#! /bin/sh
if grep -i "error" %s; then
exit 1
fi
if grep "Final checks on result file (seems to be OK):" %s; then
exit 0
else
exit 1
fi
""" % (logfileName,logfileName))
fd.close()
os.system( 'chmod u+x check_log.sh' )
cmd = './check_log.sh'
DIRAC.gLogger.notice( 'Executing system call:', cmd )
if( os.system( cmd ) ):
jobReport.setApplicationStatus( 'EvnDisp Log Check Failed' )
DIRAC.exit( -1 )
##################################################################
########### remove the converted dst file #############################################
cmd = 'rm ' + dstfile
if( os.system( cmd ) ):
DIRAC.exit( -1 )
DIRAC.exit()
