Example #1
0
    def get_mask_hotpix(sp) :

        if sp.mask_hotpix != None : return sp.mask_hotpix
        sp.mask_hotpix = gu.get_array_from_file(fnm.path_hotpix_mask())
        if sp.mask_hotpix != None and cp.mask_hot_is_used.value() :
            logger.info('HOTPIX mask is taken from file ' + fnm.path_hotpix_mask(), __name__)
        else :
            sp.mask_hotpix = np.ones((sp.rows,sp.cols), dtype=np.uint8)
            #sp.mask_hotpix = sp.get_random_binomial_img(p=0.99)   
            logger.info('HOTPIX mask is not applied', __name__)
        return sp.mask_hotpix
Example #2
0
    def get_mask_hotpix(sp) :

        if sp.mask_hotpix != None : return sp.mask_hotpix
        sp.mask_hotpix = gu.get_array_from_file(fnm.path_hotpix_mask())
        if sp.mask_hotpix != None :
            logger.info('HOTPIX mask is taken from file ' + fnm.path_hotpix_mask(), __name__)
        else :
            sp.mask_hotpix = np.ones((sp.rows,sp.cols), dtype=np.uint8)
            #sp.mask_hotpix = sp.get_random_binomial_img(p=0.99)   
            logger.info('HOTPIX mask is not applied', __name__)
        return sp.mask_hotpix
Example #3
0
def get_list_of_deploy_commands_and_sources_dark(str_run_number,
                                                 str_run_range):
    """Get list of deploy commands for all detectors of the same type"""

    cp.str_run_number.setValue(str_run_number)
    #cp.blsp.print_list_of_types_and_sources()
    list_of_dtypes, list_of_sources, list_of_ctypes = cp.blsp.list_of_types_and_sources_for_selected_detectors(
    )
    # list_of_dtypes  : ['CsPad::DataV1',    'CsPad::DataV1']
    # list_of_sources : ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']
    # list_of_ctypes  : ['CsPad::CalibV1',   'CsPad::CalibV1']

    #print 'list_of_dtypes  :', list_of_dtypes
    #print 'list_of_sources:',  list_of_sources
    #print 'list_of_ctypes :',  list_of_ctypes

    list_of_deploy_commands = get_list_of_deploy_commands_for_calibtype(
        list_of_ctypes, list_of_dtypes, list_of_sources, fnm.path_peds_ave(),
        'pedestals', str_run_range)
    list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(
        list_of_ctypes, list_of_dtypes, list_of_sources, fnm.path_peds_rms(),
        'pixel_rms', str_run_range)

    if cp.dark_deploy_hotpix.value():
        list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(
            list_of_ctypes, list_of_dtypes, list_of_sources,
            fnm.path_hotpix_mask(), 'pixel_status', str_run_range)

    return list_of_deploy_commands, list_of_sources
    def make_psana_cfg_file_for_peds_aver_v1 (self) :
        self.path_in  = apputils.AppDataPath('CorAna/scripts/psana-peds-aver.cfg').path()
        self.path_out = fnm.path_peds_aver_psana_cfg()
        self.d_subs   = {'FNAME_XTC'      : fnm.path_dark_xtc_cond(),
                         'SKIP'           : str( cp.bat_dark_start.value() - 1 ),
                         'EVENTS'         : str( cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1 ),
                         'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
                         'DETINFO'        : str( cp.bat_det_info.value() ),
                         'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
                         'FNAME_PEDS_RMS' : fnm.path_pedestals_rms()
                         }

        self.d_subs['FNAME_HOTPIX_MASK'   ] = fnm.path_hotpix_mask()
        self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )

        #if cp.mask_hot_is_used.value() : 
        #    self.d_subs['FNAME_HOTPIX_MASK'   ] = fnm.path_hotpix_mask()
        #    self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
        #else :
        #    self.d_subs['FNAME_HOTPIX_MASK'   ] = ''
        #    self.d_subs['HOTPIX_THRESHOLD_ADU'] = '10000'

        #self.print_substitution_dict()
        #self.make_cfg_file()
        txt_cfg = self.text_for_section()
        self.save_cfg_file(txt_cfg, self.path_out)
    def make_psana_cfg_file_for_peds_aver(self):
        self.path_in = apputils.AppDataPath(
            'CorAna/scripts/psana-peds-aver.cfg').path()
        self.path_out = fnm.path_peds_aver_psana_cfg()
        self.d_subs = {
            'FNAME_XTC': fnm.path_dark_xtc_cond(),
            'SKIP': str(cp.bat_dark_start.value() - 1),
            'EVENTS':
            str(cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1),
            'IMG_REC_MODULE': str(cp.bat_img_rec_mod.value()),
            'DETINFO': str(cp.bat_det_info.value()),
            'FNAME_PEDS_AVE': fnm.path_pedestals_ave(),
            'FNAME_PEDS_RMS': fnm.path_pedestals_rms()
        }

        self.d_subs['FNAME_HOTPIX_MASK'] = fnm.path_hotpix_mask()
        self.d_subs['HOTPIX_THRESHOLD_ADU'] = str(cp.mask_hot_thr.value())

        #if cp.mask_hot_is_used.value() :
        #    self.d_subs['FNAME_HOTPIX_MASK'   ] = fnm.path_hotpix_mask()
        #    self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
        #else :
        #    self.d_subs['FNAME_HOTPIX_MASK'   ] = ''
        #    self.d_subs['HOTPIX_THRESHOLD_ADU'] = '10000'

        self.print_substitution_dict()
        self.make_cfg_file()
    def cfg_file_body_for_peds_aver(self) :

        txt_cfg_body   = '#Module parameters'
        self.ind = 0

        for det_name in cp.list_of_dets_selected() :
            lst_tepes, lst_srcs = cp.blsp.list_of_types_and_sources_for_detector(det_name)
            list_path_peds_ave    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(),    lst_srcs)
            list_path_peds_rms    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(),    lst_srcs)
            list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)

            if self.do_test_print : print 'Detector selected: %10s' % (det_name), '  sources:', lst_srcs

            for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
                self.ind += 1 
                #print self.ind, self.source, self.fname_ave, self.fname_rms

                # list_of_dets   = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal2000', 'Opal4000', 'Acqiris'] 
                #if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
                #elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
                if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
                elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
                elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
                elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_ndarr()
               #elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_img()
                elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_acqiris()
                elif det_name == cp.list_of_dets[8] : self.print_warning()
                else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)
    def cfg_file_body_for_peds_aver(self) :

        txt_cfg_body   = '#Module parameters'
        self.ind = 0

        for det_name in cp.list_of_dets_selected() :
            lst_tepes, lst_srcs = cp.blsp.list_of_types_and_sources_for_detector(det_name)
            list_path_peds_ave    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(),    lst_srcs)
            list_path_peds_rms    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(),    lst_srcs)
            list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)

            if self.do_test_print : print 'Detector selected: %10s' % (det_name), '  sources:', lst_srcs

            for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
                self.ind += 1 
                #print self.ind, self.source, self.fname_ave, self.fname_rms

                # list_of_dets   = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal2000', 'Opal4000', 'Acqiris'] 
                #if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
                #elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
                if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
                elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
                elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
                elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd()
                elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_acqiris()
                elif det_name == cp.list_of_dets[8] : self.print_warning()
                else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)
    def add_cfg_module_ndarraverage_for_peds_aver (self) :
        self.path_in  = apputils.AppDataPath('CorAna/scripts/psana-module-ndarraverage.cfg').path()
        mod = 'ImgAlgos.NDArrAverage'
        self.d_subs   = {
                         'MODULE'               : mod,
                         'DETINFO'              : str( cp.bat_det_info.value() ),
                         'IMAGE'                : 'img',
                         'FNAME_AVE'            : fnm.path_pedestals_ave(),
                         'FNAME_RMS'            : fnm.path_pedestals_rms(),
                         'FNAME_MASK'           : fnm.path_hotpix_mask(),
                         'THR_RMS_ADU'          : str( cp.mask_hot_thr.value() ),
                         'PRINT_BITS'           : '57'
                         }

        self.add_module_in_cfg (mod)
Example #9
0
    def add_cfg_module_ndarraverage_for_peds_aver(self):
        self.path_in = apputils.AppDataPath(
            'CorAna/scripts/psana-module-ndarraverage.cfg').path()
        mod = 'ImgAlgos.NDArrAverage'
        self.d_subs = {
            'MODULE': mod,
            'DETINFO': str(cp.bat_det_info.value()),
            'IMAGE': 'img',
            'FNAME_AVE': fnm.path_pedestals_ave(),
            'FNAME_RMS': fnm.path_pedestals_rms(),
            'FNAME_MASK': fnm.path_hotpix_mask(),
            'THR_RMS_ADU': str(cp.mask_hot_thr.value()),
            'PRINT_BITS': '57'
        }

        self.add_module_in_cfg(mod)
    def cfg_file_body_for_peds_aver(self) :

        txt_cfg_body   = '#Module parameters'
        self.ind = 0

        for det_name in cp.list_of_dets_selected() :
            lst_types, lst_srcs, lst_ctypes = cp.blsp.list_of_types_and_sources_for_detector(det_name)
            list_path_peds_ave    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(),    lst_srcs)
            list_path_peds_rms    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(),    lst_srcs)
            list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)

            if self.do_test_print : print 'Detector selected: %10s' % (det_name), '  sources:', lst_srcs

            for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
                self.ind += 1 
                #print self.ind, self.source, self.fname_ave, self.fname_rms

                #list_of_dets   = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal1000', 'Opal2000', 'Opal4000', 'Opal8000', \
                #                  'OrcaFl40', 'Epix', 'Epix10k', 'Epix100a', 'Fccd960', 'Andor', 'Acqiris']
                #if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
                #elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
                if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
                elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
                elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
                elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_ndarr()
               #elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_img()
                elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[8] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[9] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[10]: self.add_cfg_module_peds_aver_epix()
                elif det_name == cp.list_of_dets[11]: self.add_cfg_module_peds_aver_epix()
                elif det_name == cp.list_of_dets[12]: self.add_cfg_module_peds_aver_epix()
                elif det_name == cp.list_of_dets[13]: self.add_cfg_module_peds_aver_camera(out_dtype='int')
                elif det_name == cp.list_of_dets[14]: self.add_cfg_module_peds_aver_andor()
                elif det_name == cp.list_of_dets[15]: self.add_cfg_module_peds_aver_acqiris()
                elif det_name == cp.list_of_dets[16]: self.print_warning()
                else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)

        if self.ind > 0 : return True

        msg = 'Selected detectors NOT FOUND in the list of keys in xtc scan log file !!!'
        logger.warning(msg, __name__)
        return False
    def cfg_file_body_for_peds_aver(self) :

        txt_cfg_body   = '#Module parameters'
        self.ind = 0

        for det_name in cp.list_of_dets_selected() :
            lst_types, lst_srcs, lst_ctypes = cp.blsp.list_of_types_and_sources_for_detector(det_name)
            list_path_peds_ave    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(),    lst_srcs)
            list_path_peds_rms    = gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(),    lst_srcs)
            list_path_hotpix_mask = gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_srcs)

            if self.do_test_print : print 'Detector selected: %10s' % (det_name), '  sources:', lst_srcs

            for (self.source, self.fname_ave, self.fname_rms, self.fname_mask) in zip(lst_srcs, list_path_peds_ave, list_path_peds_rms, list_path_hotpix_mask) :
                self.ind += 1 
                #print self.ind, self.source, self.fname_ave, self.fname_rms

                #list_of_dets   = ['CSPAD', 'CSPAD2x2', 'Princeton', 'pnCCD', 'Tm6740', 'Opal1000', 'Opal2000', 'Opal4000', 'Opal8000', \
                #                  'OrcaFl40', 'Epix', 'Epix10k', 'Epix100a', 'Fccd960', 'Andor', 'Acqiris']
                #if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPadPedestals')
                #elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad('cspad_mod.CsPad2x2Pedestals')
                if   det_name == cp.list_of_dets[0] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPadNDArrProducer')
                elif det_name == cp.list_of_dets[1] : self.add_cfg_module_peds_aver_cspad_with_mask('CSPadPixCoords.CSPad2x2NDArrProducer')
                elif det_name == cp.list_of_dets[2] : self.add_cfg_module_peds_aver_princeton()
                elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_ndarr()
               #elif det_name == cp.list_of_dets[3] : self.add_cfg_module_peds_aver_pnccd_img()
                elif det_name == cp.list_of_dets[4] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[5] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[6] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[7] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[8] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[9] : self.add_cfg_module_peds_aver_camera()
                elif det_name == cp.list_of_dets[10]: self.add_cfg_module_peds_aver_epix()
                elif det_name == cp.list_of_dets[11]: self.add_cfg_module_peds_aver_epix()
                elif det_name == cp.list_of_dets[12]: self.add_cfg_module_peds_aver_epix()
                elif det_name == cp.list_of_dets[13]: self.add_cfg_module_peds_aver_camera(out_dtype='int')
                elif det_name == cp.list_of_dets[14]: self.add_cfg_module_peds_aver_andor()
                elif det_name == cp.list_of_dets[15]: self.add_cfg_module_peds_aver_acqiris()
                elif det_name == cp.list_of_dets[16]: self.print_warning()
                else : logger.warning('UNKNOWN DETECTOR: %s' % det_name, __name__)

        if self.ind > 0 : return True

        msg = 'Selected detectors NOT FOUND in the list of keys in xtc scan log file !!!'
        logger.warning(msg, __name__)
        return False
Example #12
0
    def get_list_of_deploy_commands_and_sources(self):
        """Get list of deploy commands for all detectors of the same type"""
        self.exportLocalPars()
        #cp.blsp.print_list_of_types_and_sources()
        list_of_types, list_of_sources = cp.blsp.list_of_types_and_sources_for_selected_detectors(
        )
        # list_of_types  : ['CsPad::DataV1',    'CsPad::DataV1']
        # list_of_sources: ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']

        list_of_deploy_commands = self.get_list_of_deploy_commands_for_calibtype(
            list_of_types, list_of_sources, fnm.path_peds_ave(), 'pedestals')

        if cp.dark_deploy_hotpix.value():
            list_of_deploy_commands += self.get_list_of_deploy_commands_for_calibtype(
                list_of_types, list_of_sources, fnm.path_hotpix_mask(),
                'pixel_status')

        return list_of_deploy_commands, list_of_sources
    def make_psana_cfg_file_for_data_aver (self) :
        self.path_in  = apputils.AppDataPath('CorAna/scripts/psana-data-aver.cfg').path()
        self.path_out = fnm.path_data_aver_psana_cfg()
        self.d_subs   = {'FNAME_XTC'      : fnm.path_data_xtc_cond(),
                         'SKIP'           : str( cp.bat_data_start.value() - 1 ),
                         'EVENTS'         : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
                         'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
                         'DETINFO'        : str( cp.bat_det_info.value() ),
                         'FNAME_DATA_AVE' : fnm.path_data_ave(),
                         'FNAME_DATA_RMS' : fnm.path_data_rms(),
                         'SAT_THR_ADU'    : str( cp.ccdset_adcsatu.value() ),
                         'SATPIX_MASK'    : fnm.path_satpix_mask(),
                         'HOTPIX_MASK'    : fnm.path_hotpix_mask(),
                         'SATPIX_FRAC'    : fnm.path_satpix_frac(),
                         'HOTPIX_FRAC'    : fnm.path_hotpix_frac()
                         }
        # cp.ccdset_ccdgain.value()
        # cp.ccdset_ccdeff .value()

        self.print_substitution_dict()
        self.make_cfg_file()
Example #14
0
    def make_psana_cfg_file_for_data_aver (self) :
        self.path_in  = apputils.AppDataPath('CorAna/scripts/psana-data-aver.cfg').path()
        self.path_out = fnm.path_data_aver_psana_cfg()
        self.d_subs   = {'FNAME_XTC'      : fnm.path_data_xtc_cond(),
                         'SKIP'           : str( cp.bat_data_start.value() - 1 ),
                         'EVENTS'         : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
                         'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
                         'DETINFO'        : str( cp.bat_det_info.value() ),
                         'FNAME_DATA_AVE' : fnm.path_data_ave(),
                         'FNAME_DATA_RMS' : fnm.path_data_rms(),
                         'SAT_THR_ADU'    : str( cp.ccdset_adcsatu.value() ),
                         'SATPIX_MASK'    : fnm.path_satpix_mask(),
                         'HOTPIX_MASK'    : fnm.path_hotpix_mask(),
                         'SATPIX_FRAC'    : fnm.path_satpix_frac(),
                         'HOTPIX_FRAC'    : fnm.path_hotpix_frac()
                         }
        # cp.ccdset_ccdgain.value()
        # cp.ccdset_ccdeff .value()

        self.print_substitution_dict()
        self.make_cfg_file()
    def make_psana_cfg_file_for_peds_aver_princeton (self) :
        self.path_in  = apputils.AppDataPath('CalibManager/scripts/psana-peds-aver-princeton.cfg').path()
        self.path_out = fnm.path_peds_aver_psana_cfg()
        self.d_subs   = {'FNAME_XTC'      : str(fnm.path_to_xtc_files_for_run()),
                         'SKIP'           : str( cp.bat_dark_start.value() - 1 ),
                         'EVENTS'         : str( cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1 ),
                         'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
                         'DETINFO'        : str( cp.bat_det_info.value() ),
                         'FNAME_PEDS_AVE' : fnm.path_peds_ave(),
                         'FNAME_PEDS_RMS' : fnm.path_peds_rms()
                         }

        self.d_subs['FNAME_HOTPIX_MASK'   ] = fnm.path_hotpix_mask()
        self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )

        #if cp.mask_hot_is_used.value() : 
        #    self.d_subs['FNAME_HOTPIX_MASK'   ] = fnm.path_hotpix_mask()
        #    self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
        #else :
        #    self.d_subs['FNAME_HOTPIX_MASK'   ] = ''
        #    self.d_subs['HOTPIX_THRESHOLD_ADU'] = '10000'

        self.print_substitution_dict()
        self.make_cfg_file()
Example #16
0
 def get_list_of_files_dark_expected(self):
     lst_of_srcs = cp.blsp.list_of_sources_for_selected_detectors()
     return fnm.get_list_of_files_peds() \
          + gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(),    lst_of_srcs) \
          + gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(),    lst_of_srcs) \
          + gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_of_srcs)
Example #17
0
 def get_list_of_files_dark_expected(self) :
     lst_of_srcs = cp.blsp.list_of_sources_for_selected_detectors()
     return fnm.get_list_of_files_peds() \
          + gu.get_list_of_files_for_list_of_insets(fnm.path_peds_ave(),    lst_of_srcs) \
          + gu.get_list_of_files_for_list_of_insets(fnm.path_peds_rms(),    lst_of_srcs) \
          + gu.get_list_of_files_for_list_of_insets(fnm.path_hotpix_mask(), lst_of_srcs)
Example #18
0
    def get_list_of_deploy_commands_and_sources(self):
        """Get list of deploy commands for all detectors of the same type"""
        self.exportLocalPars()
        #cp.blsp.print_list_of_types_and_sources()
        list_of_types, list_of_sources = cp.blsp.list_of_types_and_sources_for_selected_detectors()
        # list_of_types  : ['CsPad::DataV1',    'CsPad::DataV1']
        # list_of_sources: ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']

        list_of_deploy_commands  = self.get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_ave(),    'pedestals')
        list_of_deploy_commands += self.get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_rms(),    'pixel_rms')

        if cp.dark_deploy_hotpix.value() :
            list_of_deploy_commands += self.get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_hotpix_mask(), 'pixel_status')

        return list_of_deploy_commands, list_of_sources
Example #19
0
def get_list_of_deploy_commands_and_sources_dark(str_run_number, str_run_range):
    """Get list of deploy commands for all detectors of the same type"""

    cp.str_run_number.setValue(str_run_number)
    #cp.blsp.print_list_of_types_and_sources()
    list_of_types, list_of_sources = cp.blsp.list_of_types_and_sources_for_selected_detectors()
    # list_of_types  : ['CsPad::DataV1',    'CsPad::DataV1']
    # list_of_sources: ['CxiDs1.0:Cspad.0', 'CxiDsd.0:Cspad.0']

    list_of_deploy_commands  = get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_ave(), 'pedestals', str_run_range)
    list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_peds_rms(), 'pixel_rms', str_run_range)

    if cp.dark_deploy_hotpix.value() :
        list_of_deploy_commands += get_list_of_deploy_commands_for_calibtype(list_of_types, list_of_sources, fnm.path_hotpix_mask(), 'pixel_status', str_run_range)

    return list_of_deploy_commands, list_of_sources
Example #20
0
 def get_list_of_files_peds(self) :
     list_of_fnames = fnm.get_list_of_files_peds() \
          + cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
          + cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
     list_of_fnames.append(fnm.path_hotpix_mask())
     return list_of_fnames
Example #21
0
 def get_list_of_files_peds(self):
     list_of_fnames = fnm.get_list_of_files_peds() \
          + cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_ave()) \
          + cp.blsp.get_list_of_files_for_all_sources(fnm.path_peds_rms())
     list_of_fnames.append(fnm.path_hotpix_mask())
     return list_of_fnames