def get_mask_satpix(sp) :
if sp.mask_satpix != None : return sp.mask_satpix
sp.mask_satpix = gu.get_array_from_file(fnm.path_satpix_mask())
if sp.mask_satpix != None :
logger.info('SATPIX mask is taken from file ' + fnm.path_satpix_mask(), __name__)
else :
sp.mask_satpix = np.ones((sp.rows,sp.cols), dtype=np.uint8)
#sp.mask_satpix = sp.get_random_binomial_img(p=0.98)
logger.info('SATPIX mask is not applied', __name__)
return sp.mask_satpix
def get_mask_satpix(sp) :
if sp.mask_satpix != None : return sp.mask_satpix
sp.mask_satpix = gu.get_array_from_file(fnm.path_satpix_mask())
if sp.mask_satpix != None :
logger.info('SATPIX mask is taken from file ' + fnm.path_satpix_mask(), __name__)
else :
sp.mask_satpix = np.ones((sp.rows,sp.cols), dtype=np.uint8)
#sp.mask_satpix = sp.get_random_binomial_img(p=0.98)
logger.info('SATPIX mask is not applied', __name__)
return sp.mask_satpix
def make_psana_cfg_file_for_data_aver_v1(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-data-aver.cfg').path()
self.path_out = fnm.path_data_aver_psana_cfg()
self.d_subs = {
'FNAME_XTC': fnm.path_data_xtc_cond(),
'SKIP': str(cp.bat_data_start.value() - 1),
'EVENTS':
str(cp.bat_data_end.value() - cp.bat_data_start.value() + 1),
'IMG_REC_MODULE': str(cp.bat_img_rec_mod.value()),
'DETINFO': str(cp.bat_det_info.value()),
'FNAME_DATA_AVE': fnm.path_data_raw_ave(),
'FNAME_DATA_RMS': fnm.path_data_raw_rms(),
'SAT_THR_ADU': str(cp.ccdset_adcsatu.value()),
'SATPIX_MASK': fnm.path_satpix_mask(),
'SATPIX_FRAC': fnm.path_satpix_frac(),
'HOTPIX_MASK': '', # fnm.path_hotpix_mask(),
'HOTPIX_FRAC': '' # fnm.path_hotpix_frac()
}
# cp.ccdset_ccdgain.value()
# cp.ccdset_ccdeff .value()
#self.print_substitution_dict()
#self.make_cfg_file()
txt_cfg = self.text_for_section()
self.save_cfg_file(txt_cfg, self.path_out)
def add_cfg_module_img_mask_evaluation (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-module-img-mask-evaluation.cfg').path()
mod = 'ImgAlgos.ImgMaskEvaluation'
self.d_subs = {
'MODULE' : mod, # str( cp.bat_img_rec_mod.value() )
'DETINFO' : str( cp.bat_det_info.value() ),
'KEY_IN' : 'img',
'SAT_THR_ADU' : str( cp.ccdset_adcsatu.value() ),
'SATPIX_MASK' : fnm.path_satpix_mask(),
'SATPIX_FRAC' : fnm.path_satpix_frac(),
'HOTPIX_MASK' : '', # fnm.path_hotpix_mask(),
'HOTPIX_FRAC' : '' # fnm.path_hotpix_frac()
}
self.add_module_in_cfg (mod)
def add_cfg_module_img_mask_evaluation(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-module-img-mask-evaluation.cfg').path()
mod = 'ImgAlgos.ImgMaskEvaluation'
self.d_subs = {
'MODULE': mod, # str( cp.bat_img_rec_mod.value() )
'DETINFO': str(cp.bat_det_info.value()),
'KEY_IN': 'img',
'SAT_THR_ADU': str(cp.ccdset_adcsatu.value()),
'SATPIX_MASK': fnm.path_satpix_mask(),
'SATPIX_FRAC': fnm.path_satpix_frac(),
'HOTPIX_MASK': '', # fnm.path_hotpix_mask(),
'HOTPIX_FRAC': '' # fnm.path_hotpix_frac()
}
self.add_module_in_cfg(mod)
def make_psana_cfg_file_for_data_aver (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-data-aver.cfg').path()
self.path_out = fnm.path_data_aver_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'FNAME_DATA_AVE' : fnm.path_data_ave(),
'FNAME_DATA_RMS' : fnm.path_data_rms(),
'SAT_THR_ADU' : str( cp.ccdset_adcsatu.value() ),
'SATPIX_MASK' : fnm.path_satpix_mask(),
'SATPIX_FRAC' : fnm.path_satpix_frac(),
'HOTPIX_MASK' : '', # fnm.path_hotpix_mask(),
'HOTPIX_FRAC' : '' # fnm.path_hotpix_frac()
}
# cp.ccdset_ccdgain.value()
# cp.ccdset_ccdeff .value()
self.print_substitution_dict()
self.make_cfg_file()