Python FormatFactory.newCellAnalysis Examples

Example #1

File: test_format_factory.py Project: pb-jlandolin/PacbioToSRA

    def test_newCellAnalysis(self):
        test_cases = [
            {"input": SINGLE_BAM_CELL_ANALYSIS_TEST_DATA_PATH, "expected_result": BamFormat},
            {"input": SINGLE_HDF5_CELL_ANALYSIS_TEST_DATA_PATH, "expected_result": HDF5Format},
        ]

        for test in test_cases:
            self.assertEqual(test["expected_result"], type(FormatFactory.newCellAnalysis(test["input"])))

Example #2

File: test_format_factory.py Project: pb-jlandolin/PacbioToSRA

 def test_newCellAnalysis_throws_exception(self):
     with self.assertRaises(Exception):
         FormatFactory.newCellAnalysis(os.path.dirname(os.path.realpath(__file__)))