def setup(submit_dir, config_properties):
"""
Setup the populate module
@submit_dir submit directory path of the workflow run
@config_properties path to the propery file
"""
# global reference
global global_base_submit_dir
global global_braindb_submit_dir
global global_db_url
global global_top_wf_uuid
global_base_submit_dir = submit_dir
#Getting values from braindump file
config = utils.slurp_braindb(submit_dir)
if (config.has_key('submit_dir') or config.has_key('run')):
if config.has_key('submit_dir'):
global_braindb_submit_dir = os.path.abspath(config['submit_dir'])
else:
global_braindb_submit_dir = os.path.abspath(config['run'])
else:
logger.error(
"Submit directory cannot be found in the braindump.txt . ")
sys.exit(1)
# Create the sqllite db url
global_db_url, global_top_wf_uuid = db_utils.get_db_url_wf_uuid(
submit_dir, config_properties)
if global_db_url is None:
sys.exit(1)
def setup(submit_dir , config_properties):
"""
Setup the populate module
@submit_dir submit directory path of the workflow run
@config_properties path to the propery file
"""
# global reference
global global_base_submit_dir
global global_braindb_submit_dir
global global_db_url
global global_top_wf_uuid
global_base_submit_dir = submit_dir
#Getting values from braindump file
config = utils.slurp_braindb(submit_dir)
if (config.has_key('submit_dir') or config.has_key('run')):
if config.has_key('submit_dir'):
global_braindb_submit_dir = os.path.abspath(config['submit_dir'])
else:
global_braindb_submit_dir = os.path.abspath(config['run'])
else:
logger.error("Submit directory cannot be found in the braindump.txt . ")
sys.exit(1)
# Create the sqllite db url
global_db_url, global_top_wf_uuid = db_utils.get_db_url_wf_uuid(submit_dir, config_properties)
if global_db_url is None:
sys.exit(1)
def __init__(self, submit_dir):
''' initialize - connect to the database. '''
logger.debug ("event-scanner:<init> submit_dir: %s", submit_dir)
properties = os.path.join (submit_dir, "grayson.stampede.properties")
properties = None
self.db_url, self.wf_uuid = db_utils.get_db_url_wf_uuid (submit_dir, properties)
logger.debug ("dburl=(%s) wf_uuid=(%s)", self.db_url, self.wf_uuid)
self.database = StampedeStatistics (self.db_url, True)
self.database.initialize (self.wf_uuid)
self.totalMessages = 0