def run_dmctop(forms, uuid_fasta, uuid_text):
email = []
email.append(forms.email.data)
pre = Predict()
pre.get_result_dmctop(uuid_fasta)
out = Outputs()
out.output_result_dmctop(uuid_fasta, uuid_text)
#print('okkk')
with open(uuid_text, 'r') as ut:
result = ut.read()
#print(result)
with app.app_context():
msg = Message("Result from ICDtools",
sender="*****@*****.**",
recipients=email)
print(result)
msg.html = result
print('ready')
mail.send(msg)
print('send')
return render_template('Result3_dmctop.html', message=result2)
def predict():
A = request.form.get('TeamA')
B = request.form.get('TeamB')
H = request.form.get('Homeground')
T = request.form.get('Toss')
P = Predict(float(A), float(B), float(H), float(T))
return render_template('Message.html',
p='Team A Has a Winning Probability of {} %'.format(
P * 100))
def Index_tmp_ssurface():
# name = None
forms = FastaForm()
if forms.validate_on_submit():
email = []
email.append(forms.email.data)
print(forms.file.data)
uuid_s = uuid.uuid1()
print(uuid_s)
uuid_fasta = '/home/public/%s.fasta' % uuid_s
# pathlib.Path(uuid_fasta).touch()
uuid_text = '/home/public/%s.txt' % uuid_s
uuid_text2 = '/home/public/%s.txt2' % uuid_s
pathlib.Path(uuid_text).touch()
if forms.m_fasta.data:
m_seq = forms.m_fasta.data
# f = open(uuid_fasta, 'w')
# f.close()
with open(uuid_fasta, "w") as ws:
ws.write(m_seq)
pre = Predict()
y_pred = pre.get_result_tmp_ssurface(uuid_fasta)
out = Outputs()
out.output_result_tmp_ssurface(uuid_fasta, y_pred, uuid_text)
out.print_result_tmp_ssurface(uuid_fasta, y_pred, uuid_text2)
try:
with open(uuid_text, 'r') as ut:
result = ut.read()
msg = Message("Result from ICDtools",
sender="*****@*****.**",
recipients=email)
msg.html = result
mail.send(msg)
except OSError:
pass
try:
with open(uuid_text2, 'r') as ut2:
result2 = ut2.read()
except OSError:
pass
return render_template('Result2_tmp_ssurface.html',
message=result2)
elif forms.file.data:
# filename = forms.file.data.filename
filename = fastas.save(forms.file.data, name='home/public/demo.')
with open(filename) as fn:
m_seq = fn.read()
with open(uuid_fasta, "w+") as f:
f.write(m_seq)
pre = Predict()
y_pred = pre.get_result_tmp_ssurface(uuid_fasta)
out = Outputs()
out.output_result_tmp_ssurface(uuid_fasta, y_pred, uuid_text)
out.print_result_tmp_ssurface(uuid_fasta, y_pred, uuid_text2)
try:
with open(uuid_text, 'r') as ut:
result = ut.read()
msg = Message("Result from ICDtools",
sender="*****@*****.**",
recipients=email)
msg.html = result
mail.send(msg)
except OSError:
pass
try:
with open(uuid_text2, 'r') as ut2:
result2 = ut2.read()
except OSError:
pass
return render_template('Result2_tmp_ssurface.html',
message=result2)
return render_template('Index_tmp_ssurface.html', forms=forms)
def Index_mpls_pred():
# name = None
# forms = element.AdvancedForm()
forms = FastaForm()
if forms.validate_on_submit():
email = []
email.append(forms.email.data)
print(forms.file.data)
uuid_s = uuid.uuid1()
print(uuid_s)
uuid_fasta = '/home/public/%s.fasta' % uuid_s
pathlib.Path(uuid_fasta).touch()
uuid_text = '/home/public/%s.txt' % uuid_s
pathlib.Path(uuid_text).touch()
if forms.m_fasta.data:
# #
# # msg = Message("Result from ICDtools",
# # sender="*****@*****.**",
# # recipients=email)
# # msg.html = '111'
# # mail.send(msg)
m_seq = forms.m_fasta.data
# f = open(uuid_fasta, 'w')
# f.close()
with open(uuid_fasta, "w") as ws:
ws.write(m_seq)
pre = Predict()
result_dic, index_dic, required_dic = pre.get_result_mpls_pred(
uuid_fasta)
out = Outputs()
out.output_result_mpls_pred(required_dic, index_dic, result_dic,
uuid_text)
with open(uuid_text, 'r') as ut:
result = ut.read()
msg = Message("Result from ICDtools",
sender="*****@*****.**",
recipients=email)
msg.html = result
mail.send(msg)
return render_template('Result2_mpls_pred.html')
elif forms.file.data:
# filename = forms.file.data.filename
filename = fastas.save(forms.file.data, name='home/public/demo.')
with open(filename) as fn:
m_seq = fn.read()
with open(uuid_fasta, "w+") as f:
f.write(m_seq)
pre = Predict()
result_dic, index_dic, required_dic = pre.get_result(uuid_fasta)
out = Outputs()
out.output_result(required_dic, index_dic, result_dic, uuid_text)
with open(uuid_text, 'r') as ut:
result = ut.read()
msg = Message("Result from ICDtools",
sender="*****@*****.**",
recipients=email)
msg.html = result
mail.send(msg)
return render_template('Result2_mpls_pred.html')
return render_template('Index_mpls_pred.html', forms=forms)