def getWorkingDialog(text):
"""
Generates a working dialog object which blocks the UI.
:param text: Text to display while working
:return: The created working dialog widget
"""
progressDialog = QProgressDialog(text,
"",
0,
0,
parent=Globals.ui.tabWidgetMain)
progressDialog.setMinimumDuration(0)
progressDialog.setMinimum(0)
progressDialog.setMaximum(0)
progressDialog.setRange(0, 0)
progressDialog.setFixedSize(progressDialog.width(),
progressDialog.height())
# No cancel button <:
progressDialog.setCancelButton(None)
# No X button
progressDialog.setWindowFlags(progressDialog.windowFlags()
& ~QtCore.Qt.WindowCloseButtonHint)
progressBar = progressDialog.findChild(QProgressBar)
# :S:S
progressBar.setMinimumWidth(progressDialog.width() + 20)
return progressDialog
def DownloadNotes(self, notebook_guid):
#set progress dialog
progress = QProgressDialog("Read data from server...", "Abort downloading", 0, 100)
progress.setWindowModality(Qt.WindowModal)
#read note data from server
note_filter = NoteStore.NoteFilter()
note_filter.notebookGuid = notebook_guid
offset = 0
note_list = self.note_store.findNotes(self.authToken, note_filter, 0, 10000)
full_note_list = note_list.notes
progress.setMaximum(note_list.totalNotes + 1)
while(len(full_note_list) < note_list.totalNotes):
progress.setValue(offset)
offset = offset + len(note_list.notes)
note_list = self.note_store.findNotes(self.authToken, note_filter, offset, 10000)
full_note_list.extend(note_list.notes)
#set content of progress dialog
progress.setMaximum(len(full_note_list))
progress.setLabelText("Downloading content of notebook...")
#download the content of note
if(not hasattr(self, 'note_list')):
self.note_list = []
self.timestamp_list = dict()
guid_list = []
else:
guid_list = [note.guid for note in self.note_list]
count = 0
for note in full_note_list:
#load content
if(note.guid not in guid_list):
#add new note
note.content = self.note_store.getNoteContent(self.authToken, note.guid)
self.note_list.append(note)
self.timestamp_list[note.guid] = [date.today(), 0]
else:
#update existed note
note_index = guid_list.index(note.guid)
if(self.note_list[note_index].updated < note.updated):
self.note_list[note_index].content = self.note_store.getNoteContent(self.authToken, note.guid)
#set counter
progress.setValue(count)
count = count + 1
if(progress.wasCanceled()):
raise RuntimeError("Downloading was canceled")
#save note_list to file
saved_file = open(self.notebook_base_path + notebook_guid, 'w')
pickle.dump(self.note_list, saved_file)
saved_file.close()
#save timestamp file
timestamp_file = open(self.notebook_base_path + 'time_' + notebook_guid, 'w')
pickle.dump(self.timestamp_list, timestamp_file)
timestamp_file.close()
class UpdatesView(QDialog, Ui_UpdatesView):
def __init__(self, parent, appargs):
QDialog.__init__(self, parent)
self.setupUi(self)
self._app = esky.Esky(sys.executable,
"http://10.78.55.218/pyrite/downloads")
self._appargs = appargs
self.connectActions()
self.updateView()
def connectActions(self):
self.btnCheckForUpdates.clicked.connect(self.updateView)
self.btnInstallUpdate.clicked.connect(self.installUpdate)
self.btnClose.clicked.connect(self.reject)
def updateView(self):
self.lblCurrentVersion.setText("You are currently running Pyrite version:"
" {0}".format(version.version))
update = self._app.find_update()
if update is not None:
self.lblAvailableUpdate.setText("Pyrite version {0} is available for"
" download".format(update))
self.btnInstallUpdate.setEnabled(True)
else:
self.lblAvailableUpdate.setText("There are no new updates available at"
" this time.")
def installUpdate(self):
try:
# setup progress dialog
self._progressDlg = QProgressDialog(self)
self._progressDlg.setWindowModality(Qt.WindowModal)
self._progressDlg.setAutoClose(True)
self._progressDlg.setMinimum(0)
self._progressDlg.setMaximum(100)
self._progressDlg.setLabelText("Auto-Updating")
self._progressDlg.setCancelButton(None)
self._progressDlg.setValue(0)
self._app.auto_update(self.autoUpdateCallback)
appexe = esky.util.appexe_from_executable(sys.executable)
os.execv(appexe, self._appargs)
QMessageBox.information(None, "Updating", "Update complete!")
self._app.cleanup()
self._progressDlg.reset()
sys.exit()
except Exception, e:
print("ERROR AUTO-UPDATING APP: {0}".format(e))
def collectNoise(self, seconds):
"""
Collect noise data and update ``noiseData``.
Uses the processes/threads started in :func:`startSnifferAndAdder`.
:param seconds: Amount of seconds to capture noise
:return: True if noise was captured. False if the user pressed "Cancel"
"""
self.noiseData = []
# Setup the ProgressDialog
progressDialog = QProgressDialog(
Strings.filterTabCollectingNoiseMessageBoxText, "Cancel", 0,
seconds)
progressDialog.setMinimumDuration(0)
progressDialog.setMinimum(0)
progressDialog.setMaximum(seconds)
progressDialog.adjustSize()
progressDialog.setFixedSize(progressDialog.width() + 40,
progressDialog.height())
# Users still can click on the "X"
progressDialog.setCancelButton(None)
# Start collecting
self.startSnifferAndAdder(adderMethod=self.addSniffedNoise)
progressDialog.open()
secondsToCollect = seconds
while secondsToCollect > 0 and not progressDialog.wasCanceled():
time.sleep(0.5)
secondsToCollect -= 0.5
self.updateNoiseCollectProgress(progressDialog,
seconds - secondsToCollect)
self.stopSnifferAndAdder()
return not progressDialog.wasCanceled()
class setupApp:
def __init__(self, params):
loader = QUiLoader()
infile = QFile("gui/ui/Setup.ui")
infile.open(QFile.ReadOnly)
self.window = loader.load(infile, None)
self.loadPrefs()
self.window.quitButton.clicked.connect(self.closeApp)
self.window.saveButton.clicked.connect(self.savePrefs)
self.window.runButton.clicked.connect(self.runSV)
self.splash = QProgressDialog("Loading", "Cancel", 0, 100, parent=None)
self.splash.setWindowModality(Qt.WindowModal)
self.splash.setAutoReset(False)
self.splash.setAutoClose(False)
self.splash.hide()
self.canceled = False
self.window.show()
self.runningApp = None
def loadPrefs(self):
infile = open(PREFS_FILE,'r')
self.window.textEdit.setPlainText(infile.read())
infile.close()
def savePrefs(self):
outfile=open(PREFS_FILE,'w')
outfile.write(self.window.textEdit.toPlainText())
outfile.close()
def showProgressWidget(self, estimate=100, message="Loading..."):
self.splash.setLabelText(message)
self.splash.setMaximum(estimate)
self.splash.setValue(0)
self.splash.show()
def tickProgressWidget(self, numTicks=1, message=None):
if self.canceled:
return
if message != None:
self.splash.setLabelText(message)
newValue = min(self.splash.maximum(),numTicks+self.splash.value())
self.splash.setValue(newValue)
self.canceled = self.splash.wasCanceled()
return self.canceled
def runSV(self, params=PREFS_FILE):
self.savePrefs()
self.window.hide()
appPrefs = prefs.generateFromText(self.window.textEdit.toPlainText())
self.showProgressWidget(appPrefs.maxTicks, "Loading files...")
self.canceled = False
vData = appPrefs.loadDataObjects(callback=self.tickProgressWidget)
if self.canceled:
self.splash.hide()
self.window.show()
return
self.showProgressWidget(vData.estimateTicks(), "Writing files...")
success = vData.dumpVcfFile(path='/Users/Home/Desktop/chr3-seq_parsed.vcf',callback=self.tickProgressWidget)
if not success:
self.splash.hide()
self.window.show()
return
sys.exit(0)
# TODO write to file
def closeApp(self):
self.window.reject()
