def loadFromISPyBPushButtonClicked( self ):
print "load from ISPyB"
dialog = ISPyBExperimentExplorerWidget( "ISPyBExperimentExplorerWidget" )
experiments = self.collectBrickObject.getExperimentNamesByProposalCodeNumber()
dialog.loadExperiments( experiments )
if dialog.exec_() == Qt.QDialog.Accepted:
xmlContent = self.collectBrickObject.getRobotXMLByExperimentId( dialog.getSelectedExperimentId() )
collectPars = CollectPars( None )
collectPars.searchXML( xmlContent )
#Loading from ISPyB
collectPars.sampleType = self.sampleTypeComboBox.currentText()
collectPars.storageTemperature = self.storageTemperatureDoubleSpinBox.value()
collectPars.extraFlowTime = self.extraFlowTimeSpinBox.value()
collectPars.optimization = self.optimizationComboBox.currentIndex()
collectPars.optimizationText = self.optimizationComboBox.currentText()
collectPars.initialCleaning = self.initialCleaningCheckBox.isChecked()
collectPars.bufferMode = self.bufferModeComboBox.currentIndex()
self.bufferNames = []
# collectPars.bufferMode = self.bufferModeComboBox.currentIndex()
self.loadPars( collectPars )
else:
return None
def loadFile(self, filename):
try:
myPars = CollectPars(filename)
self.clearConfiguration()
# Clear first if load was succesful
#
for sampleID in self.sampleIDs:
index = self.sampleIDs.index(sampleID)
self.tableWidget.removeRow(index)
self.sampleIDs.remove(sampleID)
#
# General parameters
#
self.CBblock = 1
self.setComboBox(self.sampleTypeComboBox, myPars.sampleType)
self.storageTemperatureDoubleSpinBox.setValue(
float(myPars.storageTemperature))
self.extraFlowTimeSpinBox.setValue(float(myPars.extraFlowTime))
self.initialCleaningCheckBox.setChecked(myPars.initialCleaning)
# These are saved by index
self.optimizationComboBox.setCurrentIndex(myPars.optimization)
self.bufferModeComboBox.setCurrentIndex(myPars.bufferMode)
#TODO: Staffan's note: take it away
# self.historyText.clear()
# self.historyText.setText( myPars.history.strip() )
for myBuffer in myPars.bufferList:
self.addSampleRow(myBuffer)
for sample in myPars.sampleList:
self.addSampleRow(sample)
self.CBblock = 0
self.filename = filename
self.collectBrickObject.setRobotFileName(filename)
# strip all but the last part for label
self.collectBrickObject.changexmlLabel(filename)
except Exception:
logger.exception('Cannot load collection parameters file. \n')
Qt.QMessageBox.critical(
self.brick_widget, "Error",
"Error when trying to read file '%s'!" % filename)
def loadFile(self, filename):
try:
myPars = CollectPars(filename) #ISPyBCollectPars(filename)
self.clearConfiguration()
# Clear first if load was succesful
#
for sampleID in self.sampleIDs:
index = self.sampleIDs.index(sampleID)
self.tableWidget.removeRow(index)
self.sampleIDs.remove(sampleID)
#
# General parameters
#
self.CBblock = 1
self.setComboBox(self.sampleTypeComboBox, myPars.sampleType)
self.storageTemperatureDoubleSpinBox.setValue(
float(myPars.storageTemperature))
self.extraFlowTimeSpinBox.setValue(float(myPars.extraFlowTime))
self.initialCleaningCheckBox.setChecked(myPars.initialCleaning)
# These are saved by index
self.optimizationComboBox.setCurrentIndex(myPars.optimization)
self.bufferModeComboBox.setCurrentIndex(myPars.bufferMode)
self.historyText.clear()
self.historyText.setText(myPars.history.strip())
for myBuffer in myPars.bufferList:
self.addSampleRow(myBuffer)
for sample in myPars.sampleList:
self.addSampleRow(sample)
self.CBblock = 0
self.filename = filename
Qt.QMessageBox.information(
self, "Info", "The data from ISPyB was successfully loaded!")
except Exception, e:
logger.exception('Cannot load collection parameters file. \n')
Qt.QMessageBox.critical(self, "Error",
"Error when loading data from ISPyB!")
def getCollectRobotPars( self, isAll = 0 ):
params = CollectPars()
sampleList = SampleList()
bufferList = SampleList()
params.sampleType = self.sampleTypeComboBox.currentText()
params.storageTemperature = self.storageTemperatureDoubleSpinBox.value()
params.extraFlowTime = self.extraFlowTimeSpinBox.value()
params.optimization = self.optimizationComboBox.currentIndex()
params.optimizationText = self.optimizationComboBox.currentText()
params.initialCleaning = self.initialCleaningCheckBox.isChecked()
params.bufferMode = self.bufferModeComboBox.currentIndex()
#=================================================
# myBuffer mode
#=================================================
params.bufferFirst = False
params.bufferBefore = False
params.bufferAfter = False
if params.bufferMode == 0:
params.bufferFirst = True
params.bufferAfter = True
elif params.bufferMode == 1:
params.bufferBefore = True
elif params.bufferMode == 2:
params.bufferAfter = True
#=================================================
# optimization mode
#=================================================
params.optimSEUtemp = False
params.optimCodeAndSEU = False
if params.optimization == 1:
params.optimSEUtemp = True
elif params.optimization == 2:
params.optimCodeAndSEU = True
#-----------------------------------------------------
#
# SAMPLES
#
#-----------------------------------------------------
for i in range( 0, self.tableWidget.rowCount() ):
sample = self.getSampleRow( i )
if isAll or sample.enable:
if sample.isBuffer():
bufferList.append( sample )
else:
sampleList.append( sample )
#=================================================
# assign myBuffer to sample
# TODO: allow to assign more than one myBuffer. isAll with same name
#=================================================
for sample in sampleList:
sample.buffer = []
if len( bufferList ) == 1: # if there is one and only one myBuffer defined dont look at name. assign
sample.buffer.append( bufferList[0] )
else:
for myBuffer in bufferList:
if myBuffer.buffername == sample.buffername:
sample.buffer.append( myBuffer )
# ==================================================
# OPTIMIZE DATA COLLECTION PROCEDURE (IF REQUESTED)
# ==================================================
if params.optimSEUtemp:
sampleList.sortSEUtemp()
elif params.optimCodeAndSEU:
sampleList.sortCodeAndSEU()
params.sampleList = sampleList
params.bufferList = bufferList
return params
def getCollectRobotPars(self, isAll=0):
params = CollectPars()
sampleList = SampleList()
bufferList = SampleList()
params.sampleType = self.sampleTypeComboBox.currentText()
params.storageTemperature = self.storageTemperatureDoubleSpinBox.value(
)
params.extraFlowTime = self.extraFlowTimeSpinBox.value()
params.optimization = self.optimizationComboBox.currentIndex()
params.optimizationText = self.optimizationComboBox.currentText()
params.initialCleaning = self.initialCleaningCheckBox.isChecked()
params.bufferMode = self.bufferModeComboBox.currentIndex()
#=================================================
# myBuffer mode
#=================================================
params.bufferFirst = False
params.bufferBefore = False
params.bufferAfter = False
if params.bufferMode == 0:
params.bufferFirst = True
params.bufferAfter = True
elif params.bufferMode == 1:
params.bufferBefore = True
elif params.bufferMode == 2:
params.bufferAfter = True
#=================================================
# optimization mode
#=================================================
params.optimSEUtemp = False
params.optimCodeAndSEU = False
if params.optimization == 1:
params.optimSEUtemp = True
elif params.optimization == 2:
params.optimCodeAndSEU = True
#-----------------------------------------------------
#
# SAMPLES
#
#-----------------------------------------------------
for i in range(0, self.tableWidget.rowCount()):
sample = self.getSampleRow(i)
if isAll or sample.enable:
if sample.isBuffer():
bufferList.append(sample)
else:
sampleList.append(sample)
#=================================================
# assign myBuffer to sample
# TODO: allow to assign more than one myBuffer. isAll with same name
#=================================================
for sample in sampleList:
sample.buffer = []
if len(
bufferList
) == 1: # if there is one and only one myBuffer defined dont look at name. assign
sample.buffer.append(bufferList[0])
else:
for myBuffer in bufferList:
if myBuffer.buffername == sample.buffername:
sample.buffer.append(myBuffer)
# ==================================================
# OPTIMIZE DATA COLLECTION PROCEDURE (IF REQUESTED)
# ==================================================
if params.optimSEUtemp:
sampleList.sortSEUtemp()
elif params.optimCodeAndSEU:
sampleList.sortCodeAndSEU()
params.sampleList = sampleList
params.bufferList = bufferList
return params