def __init__(self, query_param_string, endpoint):
SnaptronIterator.__init__(self, query_param_string, endpoint)
self.SERVICE_URL = clsnapconf.SERVICE_URL
self.ENDPOINTS = ENDPOINTS
self.construct_query_string()
self.execute_query_string()
def __init__(self,query_param_string,instance,endpoint,outfile_handle,processor=None):
SnaptronIterator.__init__(self,query_param_string,instance,endpoint,processor=processor)
self.outfile_handle = outfile_handle
self.SERVICE_URL=clsnapconf.SERVICE_URL
self.construct_query_string()
self.execute_query_string()
def __init__(self,query_param_string,endpoint):
SnaptronIterator.__init__(self,query_param_string,endpoint)
self.SERVICE_URL=clsnapconf.SERVICE_URL
self.ENDPOINTS=ENDPOINTS
self.construct_query_string()
self.execute_query_string()
def __init__(self, query_param_string, instance, endpoint):
if endpoint == 'sample' or endpoint == 'annotation':
endpoint += 's'
SnaptronIterator.__init__(self, query_param_string, instance, endpoint)
self.SERVICE_URL = clsnapconf.SERVICE_URL
self.construct_query_string()
self.execute_query_string()
def __init__(self, query_param_string, instance, endpoint, outfile_handle):
SnaptronIterator.__init__(self, query_param_string, instance, endpoint)
self.outfile_handle = outfile_handle
self.SERVICE_URL = clsnapconf.SERVICE_URL
self.ENDPOINTS = ENDPOINTS
self.construct_query_string()
self.execute_query_string()
def fill_buffer(self):
#extend parent version to catch HTTP specific error
try:
return SnaptronIterator.fill_buffer(self)
except httplib.IncompleteRead, ir:
sys.stderr.write(ir.partial)
raise ir
def fill_buffer(self):
#extend parent version to catch HTTP specific error
try:
return SnaptronIterator.fill_buffer(self)
except httplib.IncompleteRead, ir:
sys.stderr.write(ir.partial)
raise ir
def fill_buffer(self):
#extend parent version to make sure we close gracefully
lines_read = SnaptronIterator.fill_buffer(self)
if lines_read > 0:
return lines_read
self.subp.wait()
errors = self.errors.read()
#dump any stderr output, not necessarily an error
#and it if its they'll see the stacktrace from the local module
if len(errors) > 0:
sys.stderr.write(errors)
#raise RuntimeError("error from local command call %s" % (self.cmd))
return 0
def fill_buffer(self):
#extend parent version to make sure we close gracefully
lines_read = SnaptronIterator.fill_buffer(self)
if lines_read > 0:
return lines_read
self.subp.wait()
errors = self.errors.read()
#dump any stderr output, not necessarily an error
#and it if its they'll see the stacktrace from the local module
if len(errors) > 0:
sys.stderr.write(errors)
#raise RuntimeError("error from local command call %s" % (self.cmd))
return 0
def __init__(self,query_param_string,instance,endpoint):
SnaptronIterator.__init__(self,query_param_string,instance,endpoint)
self.construct_query_string(query_param_string,endpoint)
self.execute_query_string(self.cmd)
def __init__(self,query_param_string,endpoint):
SnaptronIterator.__init__(self,query_param_string,endpoint)
self.construct_query_string(query_param_string,endpoint)
self.execute_query_string(self.cmd)
