def ITERATIVETEST_Variation_Of_Input_Parameter_inBins():
"""Tests variation of input value at field "inBins"."""
Logging.infoHTML( "<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>" )
testDataVariations = {
"Variation_1" : __getTestDataVariation1_inBins(),
}
return ( testDataVariations, executeTestOfUpdate )
def ITERATIVETEST_Variation_Of_Input_Image_input0():
"""Tests variation of input image connected at field "input0"."""
Logging.infoHTML( "<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>" )
testDataVariations = {
"Variation_1" : __getTestDataVariation1_input0(),
}
return ( testDataVariations, executeTestOfUpdate )
def ITERATIVETEST_Error_Of_Input_Image_input0():
"""Tests occurrence of an error because of an invalid image provided at field "input0"."""
Logging.infoHTML( "<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>" )
testDataVariations = {
"Missing_Object" : __getMissingObjectTestData_input0(),
}
return ( testDataVariations, testError_input0 )
def execute(command, wait=True):
returnCode = None
Logging.info('Calling "' + command + '"')
process = subprocess.Popen(command, shell=True, env={})
if wait == True:
returnCode = process.wait()
return returnCode
def ITERATIVETEST_Variation_Of_Input_Base_inMidsagittalSurface():
"""Tests variation of input Base object connected at field "inMidsagittalSurface"."""
Logging.infoHTML( "<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>" )
testDataVariations = {
"Variation_1" : __getTestDataVariation1_inMidsagittalSurface(),
}
return ( testDataVariations, executeTestOfUpdate )
def __getEmptyObjectTestData_inMidsagittalSurface():
testData = __getDefaultTestData()
Logging.infoHTML(
"<b>ToDo: Replace \"None\" with a path pointing to an empty object!</b>"
)
testData.inMidsagittalSurfacePath = None
return testData
def __getTestDataVariation1_inOptimizer():
testData = __getDefaultTestData()
Logging.infoHTML(
"<b>ToDo: Replace \"None\" with reliable variation values!</b>")
testData.inOptimizer = None
testData.output0ReferencePath = None
return testData
def ITERATIVETEST_Error_Of_Input_Base_inMidsagittalSurface():
"""Tests occurrence of an error because of an invalid Base object connected at field "inMidsagittalSurface"."""
Logging.infoHTML( "<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>" )
testDataVariations = {
"Missing_Object" : __getMissingObjectTestData_inMidsagittalSurface(),
"Empty_Object" : __getEmptyObjectTestData_inMidsagittalSurface(),
}
return ( testDataVariations, testError_inMidsagittalSurface )
def ITERATIVETEST_Error_Of_Input_Parameter_inBins():
"""Tests occurrence of an error because of an invalid input value provided at field "inBins"."""
Logging.infoHTML( "<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>" )
testDataVariations = {
"Invalid_Variation_1" : __getInvalidTestDataVariation1_inBins(),
"Invalid_Variation_2" : __getInvalidTestDataVariation2_inBins(),
}
return ( testDataVariations, testError_inBins )
def ITERATIVETEST_Variation_Of_Input_Base_inMidsagittalSurface():
"""Tests variation of input Base object connected at field "inMidsagittalSurface"."""
Logging.infoHTML(
"<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>")
testDataVariations = {
"Variation_1": __getTestDataVariation1_inMidsagittalSurface(),
}
return (testDataVariations, executeTestOfUpdate)
def ITERATIVETEST_Error_Of_Input_Base_inMidsagittalSurface():
"""Tests occurrence of an error because of an invalid Base object connected at field "inMidsagittalSurface"."""
Logging.infoHTML(
"<b>ToDo: Add more \"TestData\" objects to maximize variations!</b>")
testDataVariations = {
"Missing_Object": __getMissingObjectTestData_inMidsagittalSurface(),
"Empty_Object": __getEmptyObjectTestData_inMidsagittalSurface(),
}
return (testDataVariations, testError_inMidsagittalSurface)
def __getTestDataVariation1_inBins(): testData = __getDefaultTestData() Logging.infoHTML( "<b>ToDo: Replace \"None\" with reliable variation values!</b>" ) testData.inBins = None testData.output0ReferencePath = None testData.outPlane = None testData.outCMSPx = None testData.outLog = None return testData
def __getInvalidTestDataVariation2_inOptimizer():
Logging.infoHTML(
"<b>ToDo: Rename function that the name matches the intention of returned test data!</b>"
)
testData = __getDefaultTestData()
Logging.infoHTML(
"<b>ToDo: Replace \"None\" with a reliable invalid value of \"inOptimizer\"!</b>"
)
testData.inOptimizer = None
return testData
def __getDefaultTestData(): """Returns a default and valid TestData object.""" Logging.infoHTML( "<b>ToDo: Set valid values for default TestData object!</b>" ) testData = TestData() testData.input0Path = None testData.inBins = None testData.output0ReferencePath = None testData.outPlane = None testData.outCMSPx = None testData.outLog = None return testData
def __getChecksToValidateOutputAfterUpdate( testData ):
checks = (
AMChecks.ImageCompareCheck( "Validate_output0" ),
AMChecks.FloatEqualCheck( fieldName = "{}.outPlane".format( MODULE_NAME ),
value = testData.outPlane,
epsilon = 0.0 ),
AMChecks.EqualCheck( fieldName = "{}.outCMSPx".format( MODULE_NAME ),
value = testData.outCMSPx ),
AMChecks.EqualCheck( fieldName = "{}.outLog".format( MODULE_NAME ),
value = testData.outLog ),
)
Logging.infoHTML( "<b>ToDo: Set up epsilon value of \"FloatEqualCheck\" objects!</b>" )
return checks
def __getDefaultTestData(): """Returns a default and valid TestData object.""" Logging.infoHTML( "<b>ToDo: Set valid values for default TestData object!</b>" ) testData = TestData() testData.input0Path = None testData.inMidsagittalSurfacePath = None testData.inIntersectionMode = None testData.inVolumeThreshold = None testData.inUseGlobalSubsample = None testData.inGlobalSubsample = None testData.inXSubsample = None testData.inYSubsample = None testData.inZSubsample = None testData.output0ReferencePath = None return testData
def __getDefaultTestData():
"""Returns a default and valid TestData object."""
Logging.infoHTML(
"<b>ToDo: Set valid values for default TestData object!</b>")
testData = TestData()
testData.input0Path = None
testData.inMidsagittalSurfacePath = None
testData.inIntersectionMode = None
testData.inVolumeThreshold = None
testData.inUseGlobalSubsample = None
testData.inGlobalSubsample = None
testData.inXSubsample = None
testData.inYSubsample = None
testData.inZSubsample = None
testData.output0ReferencePath = None
return testData
def __getDefaultTestData(): """Returns a default and valid TestData object.""" Logging.infoHTML( "<b>ToDo: Set valid values for default TestData object!</b>" ) testData = TestData() testData.input0Path = None testData.input1Path = None testData.inPlane1 = None testData.inPlane2 = None testData.inUseSecondPlane = None testData.inCMSPx = None testData.inBins = None testData.inGridSize = None testData.inMaxSize = None testData.inDelta = None testData.inEps = None testData.inOptimizer = None testData.output0ReferencePath = None return testData
def __getDefaultTestData():
"""Returns a default and valid TestData object."""
Logging.infoHTML(
"<b>ToDo: Set valid values for default TestData object!</b>")
testData = TestData()
testData.input0Path = None
testData.input1Path = None
testData.inPlane1 = None
testData.inPlane2 = None
testData.inUseSecondPlane = None
testData.inCMSPx = None
testData.inBins = None
testData.inGridSize = None
testData.inMaxSize = None
testData.inDelta = None
testData.inEps = None
testData.inOptimizer = None
testData.output0ReferencePath = None
return testData
def tearDownTestCase():
if not mayRunTest():
return
Logging.info('Quitting OsiriX...')
execute(
'/usr/bin/osascript -e \'tell application id "com.rossetantoine.osirix" to quit\''
)
Logging.info('done.')
if myTestDirPath:
Logging.info('Removing OsiriX database parent folder...')
execute('/bin/rm -fvr \'%s\'' % myTestDirPath)
Logging.info('done.')
return
def setUpTestCase():
global myctx, myTestDirPath
if not mayRunTest():
Logging.info('Test is not allowed to run')
return
if not socket.gethostname().startswith(('fritter-pc.', 'fritter-nb.')):
Logging.info('Installing OsiriX plugin...')
result = execute(
'/usr/bin/rsync -av --delete \'%s/Applications/MeVisLab.app/Contents/Packages/FMEwork/ReleaseMeVis/bin/PlugIns/OsiriXMeVisLabBridge.osirixplugin\' \'%s/Library/Application Support/OsiriX/Plugins/\''
% (os.path.expanduser('~'), os.path.expanduser('~')))
Logging.info('done.')
ASSERT_EQ(result, 0, 'Return code of rsync')
else:
Logging.info('Using already installed OsiriX plugin...')
Logging.info('Creating OsiriX database parent folder...')
# make sure we have exotic characters and spaces in the path
myTestDirPath = tempfile.mkdtemp(prefix=u'Üä éẅ ')
Logging.info(myTestDirPath)
Logging.info('done.')
Logging.info('Starting OsiriX...')
result = execute(
'/usr/bin/osascript -e \'tell application id "com.rossetantoine.osirix" to activate\''
)
Logging.info('done.')
ASSERT_EQ(result, 0, 'Return code of osascript')
Logging.info(
'Initializing OsiriX database: OsiriX.OpenDB( {"path": "%s"} )' %
myTestDirPath)
t = OsiriXXMLRPCThread('''self.OsiriX.OpenDB( {"path": "''' +
myTestDirPath + '''"} )''')
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of OpenDB')
Logging.info('Loading test network...')
myctx = MLAB.priv().loadNetworkFromFile(
ctx.localPath() +
'/OsiriXBridgeTest_manual.mlab').lookupModule('macro')
Logging.info('done.')
ASSERT_NE(myctx, 0, 'MeVisLab network context')
return
def tearDownTestCase ():
if not mayRunTest():
return
Logging.info('Closing OsiriX database: OsiriX.CloseDB( {"path": "%s"} )' % myTestDirPath)
t = OsiriXXMLRPCThread('''self.OsiriX.CloseDB( {"path": "''' + myTestDirPath + '''"} )''')
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of CloseDB')
Logging.info('Quitting OsiriX...')
execute('/usr/bin/osascript -e \'tell application id "' + kAppBundleId + '" to quit\'')
Logging.info('done.')
if myTestDirPath:
Logging.info('Removing OsiriX database parent folder...')
execute('/bin/rm -fvr \'%s\'' % myTestDirPath)
Logging.info('done.')
return
def TEST001_FilterChain():
if not mayRunTest():
return
try:
# Import test series
localTestSeriesPath = os.path.join(
MLAB.variable('TESTCENTER_EXTERNAL_DATA_FME'),
'MeVisLabModules/Release/OsiriXBridge/Test_Patient/')
result = execute(
'/usr/bin/ditto \'%s\' \'%s/OsiriX Data/INCOMING.noindex/\'' %
(localTestSeriesPath, myTestDirPath))
ASSERT_EQ(result, 0, 'Return code of ditto')
# Grant some time for receiving images
for n in range(300):
MLAB.processEvents()
time.sleep(0.050)
# Select test series
Logging.info(
'OsiriX.DBWindowFind( {"request": "(name LIKE \'*Test*\')", "table": "Study", "execute": "Select"} )'
)
t = OsiriXXMLRPCThread(
'''self.OsiriX.DBWindowFind( {"request": "(name LIKE '*Test*')", "table": "Study", "execute": "Select"} )'''
)
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of DBWindowFind')
ASSERT_EQ(int(t.result['elements'][0]['numberOfImages']), 64,
'Number of images in study')
# Send selected series to MeVisLab
Logging.info(
'OsiriX.SendSelectedSeriesToMeVisLab( {"target": "TestTarget"} )')
t = OsiriXXMLRPCThread(
'''self.OsiriX.SendSelectedSeriesToMeVisLab( {"target": "TestTarget"} )'''
)
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0,
'Result of SendSelectedSeriesToMeVisLab')
# Grant some time for receiving images
for n in range(300):
MLAB.processEvents()
time.sleep(0.050)
# Delete test series
Logging.info(
'OsiriX.DBWindowFind( {"request": "(name LIKE \'*Test*\')", "table": "Study", "execute": "Delete"} )'
)
t = OsiriXXMLRPCThread(
'''self.OsiriX.DBWindowFind( {"request": "(name LIKE '*Test*')", "table": "Study", "execute": "Delete"} )'''
)
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of DBWindowFind')
ASSERT_EQ(int(t.result['elements'][0]['numberOfImages']), 128,
'Number of images in study')
except (xmlrpclib.Error, socket.error), err:
print "ERROR", err
def __getDefaultTestData(): """Returns a default and valid TestData object.""" Logging.infoHTML( "<b>ToDo: Set valid values for default TestData object!</b>" ) testData = TestData() return testData
def __getTestDataVariation1_inOptimizer(): testData = __getDefaultTestData() Logging.infoHTML( "<b>ToDo: Replace \"None\" with reliable variation values!</b>" ) testData.inOptimizer = None testData.output0ReferencePath = None return testData
def TEST001_FilterChain ():
if not mayRunTest():
return
try:
# Check client id
Logging.info('Checking reported client application bundle id...')
appId = myctx.field('OsiriXBridge.clientAppBundleId').value
Logging.info('Connected to %s' % (appId))
Logging.info('done.')
ASSERT_EQ(appId, kAppBundleId, 'Check for reported client id')
# Import test series
localTestSeriesPath = os.path.join(MLAB.variable('TESTCENTER_EXTERNAL_DATA_FME'), 'MeVisLabModules/Release/OsiriXBridge/Test_Patient/')
result = execute('/usr/bin/ditto \'%s\' \'%s/%s/INCOMING.noindex/\'' % (localTestSeriesPath, myTestDirPath, kAppDBDirName))
ASSERT_EQ(result, 0, 'Return code of ditto')
# Grant some time for receiving images
for _ in range(300):
MLAB.processEvents()
time.sleep(0.050)
# Select test series
Logging.info('OsiriX.DBWindowFind( {"request": "(name LIKE \'*Test*\')", "table": "Study", "execute": "Select"} )')
t = OsiriXXMLRPCThread('''self.OsiriX.DBWindowFind( {"request": "(name LIKE '*Test*')", "table": "Study", "execute": "Select"} )''')
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of DBWindowFind')
ASSERT_EQ(int(t.result['elements'][0]['numberOfImages']), 64, 'Number of images in study')
# Send selected series to MeVisLab
Logging.info('OsiriX.SendSelectedSeriesToMeVisLab( {"target": "TestTarget"} )')
t = OsiriXXMLRPCThread('''self.OsiriX.SendSelectedSeriesToMeVisLab( {"target": "TestTarget"} )''')
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of SendSelectedSeriesToMeVisLab')
# Grant some time for receiving images
for _ in range(300):
MLAB.processEvents()
time.sleep(0.050)
# Select complete series
Logging.info('OsiriX.DBWindowFind( {"request": "(name LIKE \'*Test*\')", "table": "Study", "execute": "Select"} )')
t = OsiriXXMLRPCThread('''self.OsiriX.DBWindowFind( {"request": "(name LIKE '*Test*')", "table": "Study", "execute": "Select"} )''')
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of DBWindowFind')
ASSERT_EQ(int(t.result['elements'][0]['numberOfImages']), 128, 'Number of images in study')
# Delete test series
Logging.info('OsiriX.DBWindowFind( {"request": "(name LIKE \'*Test*\')", "table": "Study", "execute": "Delete"} )')
t = OsiriXXMLRPCThread('''self.OsiriX.DBWindowFind( {"request": "(name LIKE '*Test*')", "table": "Study", "execute": "Delete"} )''')
t.start()
t.waitForFinished()
Logging.info('Result: ' + str(t.result))
ASSERT_EQ(int(t.result['error']), 0, 'Result of DBWindowFind')
except (xmlrpc.client.Error, socket.error) as err:
print ("ERROR", err)
return
def __getEmptyObjectTestData_inMidsagittalSurface(): testData = __getDefaultTestData() Logging.infoHTML( "<b>ToDo: Replace \"None\" with a path pointing to an empty object!</b>" ) testData.inMidsagittalSurfacePath = None return testData
def __getInvalidTestDataVariation2_inBins(): Logging.infoHTML( "<b>ToDo: Rename function that the name matches the intention of returned test data!</b>" ) testData = __getDefaultTestData() Logging.infoHTML( "<b>ToDo: Replace \"None\" with a reliable invalid value of \"inBins\"!</b>" ) testData.inBins = None return testData
