def testCreateDeleteExists(self):
"""
_testCreateDeleteExists_
Test the create(), delete() and exists() methods of the file class
by creating and deleting a file. The exists() method will be
called before and after creation and after deletion.
"""
testFile = File(lfn="/this/is/a/lfn",
size=1024,
events=10,
checksums={'cksum': 1111})
assert testFile.exists() == False, \
"ERROR: File exists before it was created"
testFile.addRun(Run(1, *[45]))
testFile.create()
assert testFile.exists() > 0, \
"ERROR: File does not exist after it was created"
testFile.delete()
assert testFile.exists() == False, \
"ERROR: File exists after it has been deleted"
return
def testSetLocation(self):
"""
_testSetLocation_
Create a file and add a couple locations. Load the file from the
database to make sure that the locations were set correctly.
"""
testFileA = File(lfn="/this/is/a/lfn",
size=1024,
events=10,
checksums={'cksum': 1})
testFileA.addRun(Run(1, *[45]))
testFileA.create()
testFileA.setLocation(["se1.fnal.gov", "se1.cern.ch"])
testFileA.setLocation(["bunkse1.fnal.gov", "bunkse1.cern.ch"],
immediateSave=False)
testFileB = File(id=testFileA["id"])
testFileB.loadData()
goldenLocations = ["se1.fnal.gov", "se1.cern.ch"]
for location in testFileB["locations"]:
assert location in goldenLocations, \
"ERROR: Unknown file location"
goldenLocations.remove(location)
assert len(goldenLocations) == 0, \
"ERROR: Some locations are missing"
return
def testCreateTransaction(self):
"""
_testCreateTransaction_
Begin a transaction and then create a file in the database. Afterwards,
rollback the transaction. Use the File class's exists() method to
to verify that the file doesn't exist before it was created, exists
after it was created and doesn't exist after the transaction was rolled
back.
"""
myThread = threading.currentThread()
myThread.transaction.begin()
testFile = File(lfn="/this/is/a/lfn",
size=1024,
events=10,
checksums={'cksum': 1111})
assert testFile.exists() == False, \
"ERROR: File exists before it was created"
testFile.addRun(Run(1, *[45]))
testFile.create()
assert testFile.exists() > 0, \
"ERROR: File does not exist after it was created"
myThread.transaction.rollback()
assert testFile.exists() == False, \
"ERROR: File exists after transaction was rolled back."
return
def testAddToFileset(self):
"""
_AddToFileset_
Test to see if we can add to a fileset using the DAO
"""
testFileset = Fileset(name="inputFileset")
testFileset.create()
testFileA = File(lfn="/this/is/a/lfnA", size=1024, events=10)
testFileA.addRun(Run(1, *[45]))
testFileA.create()
testFileB = File(lfn="/this/is/a/lfnB", size=1024, events=10)
testFileB.addRun(Run(1, *[45]))
testFileB.create()
addToFileset = self.daofactory(classname="Files.AddToFileset")
addToFileset.execute(file=[testFileA['lfn'], testFileB['lfn']],
fileset=testFileset.id)
testFileset2 = Fileset(name="inputFileset")
testFileset2.loadData()
self.assertEqual(len(testFileset2.files), 2)
for file in testFileset2.files:
self.assertTrue(file in [testFileA, testFileB])
# Check that adding twice doesn't crash
addToFileset.execute(file=[testFileA['lfn'], testFileB['lfn']],
fileset=testFileset.id)
def sortedFilesFromMergeUnits(mergeUnits):
"""
_sortedFilesFromMergeUnits_
Given a list of merge units sort them and the files that they contain.
Return a list of sorted WMBS File structures.
"""
mergeUnits.sort(mergeUnitCompare)
sortedFiles = []
for mergeUnit in mergeUnits:
mergeUnit["files"].sort(fileCompare)
for file in mergeUnit["files"]:
newFile = File(id=file["file_id"], lfn=file["file_lfn"],
events=file["file_events"])
newFile.addRun(Run(file["file_run"], file["file_lumi"]))
# The WMBS data structure puts locations that are passed in through
# the constructor in the "newlocations" attribute. We want these to
# be in the "locations" attribute so that they get picked up by the
# job submitter.
newFile["locations"] = set([file["pnn"]])
newFile.addRun(Run(file["file_run"], file["file_lumi"]))
sortedFiles.append(newFile)
return sortedFiles
def createMergeJob(self, mergeableFiles):
"""
_createMergeJob_
Create a merge job for the given merge units. All the files contained
in the merge units will be associated to the job.
"""
if self.currentGroup == None:
self.newGroup()
self.newJob(name=self.getJobName())
mergeableFiles.sort(fileCompare)
for file in mergeableFiles:
newFile = File(id=file["file_id"],
lfn=file["file_lfn"],
events=file["file_events"])
# The WMBS data structure puts locations that are passed in through
# the constructor in the "newlocations" attribute. We want these to
# be in the "locations" attribute so that they get picked up by the
# job submitter.
newFile["locations"] = set([file["se_name"]])
newFile.addRun(Run(file["file_run"], file["file_lumi"]))
self.currentJob.addFile(newFile)
self.currentJob.addResourceEstimates(
disk=float(file["file_size"]) / 1024)
def test06(self):
"""
_test06_
Test repacking of 3 lumis
2 small lumis (single job), followed by a big one (multiple jobs)
files for lumi 1 and 2 are below multi-lumi thresholds
files for lumi 3 are above single-lumi threshold
"""
mySplitArgs = self.splitArgs.copy()
insertClosedLumiBinds = []
for lumi in [1, 2, 3]:
filecount = 2
for i in range(filecount):
if lumi == 3:
nevents = 500
else:
nevents = 100
newFile = File(makeUUID(), size = 1000, events = nevents)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset1.addFile(newFile)
insertClosedLumiBinds.append( { 'RUN' : 1,
'LUMI' : lumi,
'STREAM' : "A",
'FILECOUNT' : filecount,
'INSERT_TIME' : self.currentTime,
'CLOSE_TIME' : self.currentTime } )
self.fileset1.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription1)
self.insertClosedLumiDAO.execute(binds = insertClosedLumiBinds,
transaction = False)
mySplitArgs['maxLatency'] = 50000
mySplitArgs['maxInputEvents'] = 900
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 3,
"ERROR: JobFactory didn't create three jobs")
self.assertEqual(len(jobGroups[0].jobs[0].getFiles()), 4,
"ERROR: first job does not process 4 files")
self.assertEqual(len(jobGroups[0].jobs[1].getFiles()), 1,
"ERROR: second job does not process 1 file")
self.assertEqual(len(jobGroups[0].jobs[2].getFiles()), 1,
"ERROR: third job does not process 1 file")
return
def injectFilesFromDBS(inputFileset, datasetPath):
"""
_injectFilesFromDBS_
"""
print "injecting files from %s into %s, please wait..." % (datasetPath, inputFileset.name)
args={}
args["url"] = "https://cmsweb.cern.ch/dbs/prod/global/DBSReader"
args["version"] = "DBS_2_0_9"
args["mode"] = "GET"
dbsApi = DbsApi(args)
dbsResults = dbsApi.listFiles(path = datasetPath, retriveList = ["retrive_block","retrive_lumi", "retrive_run"])
# NOTE : this is to limit the number of jobs to create ... simply using first 10 files get for the needed dataset
dbsResults =dbsResults[0:2]
print " found %d files, inserting into wmbs..." % (len(dbsResults))
for dbsResult in dbsResults:
myFile = File(lfn = dbsResult["LogicalFileName"], size = dbsResult["FileSize"],
events = dbsResult["NumberOfEvents"], checksums = {"cksum": dbsResult["Checksum"]},
locations = set(['srm.ciemat.es','storm-se-01.ba.infn.it','storage01.lcg.cscs.ch']))
myRun = Run(runNumber = dbsResult["LumiList"][0]["RunNumber"])
for lumi in dbsResult["LumiList"]:
myRun.lumis.append(lumi["LumiSectionNumber"])
myFile.addRun(myRun)
myFile.create()
inputFileset.addFile(myFile)
inputFileset.commit()
inputFileset.markOpen(False)
return
def testSetLocation(self):
"""
_testSetLocation_
Create a file and add a couple locations. Load the file from the
database to make sure that the locations were set correctly.
"""
testFileA = File(lfn = "/this/is/a/lfn", size = 1024, events = 10,
checksums = {'cksum':1})
testFileA.addRun(Run( 1, *[45]))
testFileA.create()
testFileA.setLocation(["se1.fnal.gov", "se1.cern.ch"])
testFileA.setLocation(["bunkse1.fnal.gov", "bunkse1.cern.ch"],
immediateSave = False)
testFileB = File(id = testFileA["id"])
testFileB.loadData()
goldenLocations = ["se1.fnal.gov", "se1.cern.ch"]
for location in testFileB["locations"]:
assert location in goldenLocations, \
"ERROR: Unknown file location"
goldenLocations.remove(location)
assert len(goldenLocations) == 0, \
"ERROR: Some locations are missing"
return
def test03(self):
"""
_test03_
Test single lumi event threshold
Single lumi input
"""
mySplitArgs = self.splitArgs.copy()
insertClosedLumiBinds = []
for lumi in [1]:
filecount = 8
for i in range(filecount):
newFile = File(makeUUID(), size = 1000, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset1.addFile(newFile)
insertClosedLumiBinds.append( { 'RUN' : 1,
'LUMI' : lumi,
'STREAM' : "A",
'FILECOUNT' : filecount,
'INSERT_TIME' : self.currentTime,
'CLOSE_TIME' : self.currentTime } )
self.fileset1.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription1)
self.insertClosedLumiDAO.execute(binds = insertClosedLumiBinds,
transaction = False)
mySplitArgs['maxLatency'] = 50000
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
mySplitArgs['maxInputEvents'] = 650
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 2,
"ERROR: JobFactory didn't create two jobs")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 6,
"ERROR: Job does not process 6 files")
job = jobGroups[0].jobs[1]
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
self.assertEqual(self.getNumActiveSplitLumis(), 1,
"ERROR: Split lumis were not created")
return
def testAddToFileset(self):
"""
_AddToFileset_
Test to see if we can add to a fileset using the DAO
"""
testFileset = Fileset(name = "inputFileset")
testFileset.create()
testFileA = File(lfn = "/this/is/a/lfnA", size = 1024, events = 10)
testFileA.addRun(Run( 1, *[45]))
testFileA.create()
testFileB = File(lfn = "/this/is/a/lfnB", size = 1024, events = 10)
testFileB.addRun(Run( 1, *[45]))
testFileB.create()
addToFileset = self.daofactory(classname = "Files.AddToFileset")
addToFileset.execute(file = [testFileA['lfn'], testFileB['lfn']],
fileset = testFileset.id)
testFileset2 = Fileset(name = "inputFileset")
testFileset2.loadData()
self.assertEqual(len(testFileset2.files), 2)
for file in testFileset2.files:
self.assertTrue(file in [testFileA, testFileB])
# Check that adding twice doesn't crash
addToFileset.execute(file = [testFileA['lfn'], testFileB['lfn']],
fileset = testFileset.id)
def injectFilesFromDBS(inputFileset, datasetPath, runsWhiteList=[]):
"""
_injectFilesFromDBS_
"""
print("injecting files from %s into %s, please wait..." % (datasetPath, inputFileset.name))
args = {}
args["url"] = "https://cmsweb-prod.cern.ch/dbs/prod/global/DBSReader"
args["version"] = "DBS_2_1_1"
args["mode"] = "GET"
dbsApi = DbsApi(args)
dbsResults = dbsApi.listFileArray(path=datasetPath, retriveList=["retrive_lumi", "retrive_run"])
print(" found %d files, inserting into wmbs..." % (len(dbsResults)))
for dbsResult in dbsResults:
if runsWhiteList and str(dbsResult["LumiList"][0]["RunNumber"]) not in runsWhiteList:
continue
myFile = File(lfn=dbsResult["LogicalFileName"], size=dbsResult["FileSize"],
events=dbsResult["NumberOfEvents"], checksums={"cksum": dbsResult["Checksum"]},
locations="cmssrm.fnal.gov", merged=True)
myRun = Run(runNumber=dbsResult["LumiList"][0]["RunNumber"])
for lumi in dbsResult["LumiList"]:
myRun.appendLumi(lumi["LumiSectionNumber"])
myFile.addRun(myRun)
myFile.create()
inputFileset.addFile(myFile)
if len(inputFileset) < 1:
raise Exception("No files were selected!")
inputFileset.commit()
inputFileset.markOpen(False)
return
def test03(self):
"""
_test03_
Test input size threshold on multi lumis
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2]:
for i in range(2):
newFile = File(makeUUID(), size=1000, events=100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomeSE", immediateSave=False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package="WMCore.WMBS", subscription=self.subscription2)
mySplitArgs["maxInputSize"] = 1
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0, "ERROR: JobFactory should have returned no JobGroup")
time.sleep(1)
mySplitArgs["maxLatency"] = 1
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1, "ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 2, "ERROR: JobFactory didn't create two jobs")
return
def _addACDCFileToWMBSFile(self, acdcFile, inFileset = True):
"""
"""
wmbsParents = []
#pass empty check sum since it won't be updated to dbs anyway
checksums = {}
wmbsFile = File(lfn = str(acdcFile["lfn"]),
size = acdcFile["size"],
events = acdcFile["events"],
checksums = checksums,
#TODO: need to get list of parent lfn
parents = acdcFile["parents"],
locations = acdcFile["locations"],
merged = acdcFile.get('merged', True))
## TODO need to get the lumi lists
for run in acdcFile['runs']:
wmbsFile.addRun(run)
dbsFile = self._convertACDCFileToDBSFile(acdcFile)
self._addToDBSBuffer(dbsFile, checksums, acdcFile["locations"])
logging.info("WMBS File: %s\n on Location: %s"
% (wmbsFile['lfn'], wmbsFile['locations']))
if inFileset:
wmbsFile['inFileset'] = True
else:
wmbsFile['inFileset'] = False
self.wmbsFilesToCreate.append(wmbsFile)
return wmbsFile
def generateFakeMCFile(self, numEvents = 100, firstEvent = 1,
lastEvent = 100, firstLumi = 1, lastLumi = 10,
index = 1):
#MC comes with only one MCFakeFile
singleMCFileset = Fileset(name = "MCTestFileset %i" % index)
singleMCFileset.create()
newFile = File("MCFakeFileTest %i" % index, size = 1000,
events = numEvents,
locations = set(["somese.cern.ch"]))
newFile.addRun(Run(1, *range(firstLumi, lastLumi + 1)))
newFile["first_event"] = firstEvent
newFile["last_event"] = lastEvent
newFile.create()
singleMCFileset.addFile(newFile)
singleMCFileset.commit()
testWorkflow = Workflow(spec = "spec.xml", owner = "Steve",
name = "wf001", task="Test")
testWorkflow.create()
singleMCFileSubscription = Subscription(fileset = singleMCFileset,
workflow = testWorkflow,
split_algo = "EventBased",
type = "Production")
singleMCFileSubscription.create()
return singleMCFileSubscription
def generateFakeMCFile(self, numEvents = 100, firstEvent = 1,
lastEvent = 100, firstLumi = 1, lastLumi = 10,
index = 1):
#MC comes with only one MCFakeFile
singleMCFileset = Fileset(name = "MCTestFileset %i" % index)
singleMCFileset.create()
newFile = File("MCFakeFileTest %i" % index, size = 1000,
events = numEvents,
locations = set(["somese.cern.ch"]))
newFile.addRun(Run(1, *range(firstLumi, lastLumi + 1)))
newFile["first_event"] = firstEvent
newFile["last_event"] = lastEvent
newFile.create()
singleMCFileset.addFile(newFile)
singleMCFileset.commit()
testWorkflow = Workflow(spec = "spec.xml", owner = "Steve",
name = "wf001", task="Test")
testWorkflow.create()
singleMCFileSubscription = Subscription(fileset = singleMCFileset,
workflow = testWorkflow,
split_algo = "EventBased",
type = "Production")
singleMCFileSubscription.create()
return singleMCFileSubscription
def populateACDCCouch(self, numFiles = 2, lumisPerJob = 35,
eventsPerJob = 20000):
"""
_populateACDCCouch_
Create production files in couchDB to test the creation
of ACDC jobs for the EventBased algorithm
"""
# Define some constants
workflowName = "ACDC_TestEventBased"
filesetName = "/%s/Production" % workflowName
owner = "*****@*****.**"
group = "unknown"
lumisPerFile = lumisPerJob * 250
for i in range(numFiles):
for j in range(250):
lfn = "MCFakeFile-some-hash-%s" % str(i).zfill(5)
acdcFile = File(lfn = lfn, size = 100, events = eventsPerJob, locations = self.validLocations,
merged = False, first_event = 1)
run = Run(1, *range(1 + (i * lumisPerFile) + j * lumisPerJob,
(j + 1) * lumisPerJob + (i * lumisPerFile) + 2))
acdcFile.addRun(run)
acdcDoc = {"collection_name" : workflowName,
"collection_type" : "ACDC.CollectionTypes.DataCollection",
"files" : {lfn : acdcFile},
"fileset_name" : filesetName,
"owner" : {"user": owner,
"group" : group}}
self.couchDB.queue(acdcDoc)
self.couchDB.commit()
return
def test05(self):
"""
_test05_
Test multi lumis express merges with holes
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2, 4]:
for i in range(2):
newFile = File(makeUUID(), size=1000, events=100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave=False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package="WMCore.WMBS",
subscription=self.subscription2)
time.sleep(1)
mySplitArgs['maxLatency'] = 1
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 2,
"ERROR: JobFactory didn't create two jobs")
return
def injectFilesFromDBS(inputFileset, datasetPath, runsWhiteList=[]):
"""
_injectFilesFromDBS_
"""
print "injecting files from %s into %s, please wait..." % (datasetPath, inputFileset.name)
args={}
args["url"] = "http://cmsdbsprod.cern.ch/cms_dbs_prod_global/servlet/DBSServlet"
args["version"] = "DBS_2_1_1"
args["mode"] = "GET"
dbsApi = DbsApi(args)
dbsResults = dbsApi.listFiles(path = datasetPath, retriveList = ["retrive_lumi", "retrive_run"])
print " found %d files, inserting into wmbs..." % (len(dbsResults))
for dbsResult in dbsResults:
if runsWhiteList and str(dbsResult["LumiList"][0]["RunNumber"]) not in runsWhiteList:
continue
myFile = File(lfn = dbsResult["LogicalFileName"], size = dbsResult["FileSize"],
events = dbsResult["NumberOfEvents"], checksums = {"cksum": dbsResult["Checksum"]},
locations = "cmssrm.fnal.gov", merged = True)
myRun = Run(runNumber = dbsResult["LumiList"][0]["RunNumber"])
for lumi in dbsResult["LumiList"]:
myRun.lumis.append(lumi["LumiSectionNumber"])
myFile.addRun(myRun)
myFile.create()
inputFileset.addFile(myFile)
if len(inputFileset) < 1:
raise Exception, "No files were selected!"
inputFileset.commit()
inputFileset.markOpen(False)
return
def createCommonFileset():
"""
Create a simple fileset with 2 files at the same location
"""
multipleFilesFileset = Fileset(name="TestFileset")
newFile = File("/some/file/test1", size=1000, events=100)
newFile.addRun(Run(1, *[1, 3, 4, 5, 6, 7]))
newFile.addRun(Run(2, *[1, 2, 4, 5, 6, 7]))
newFile.setLocation('T2_CH_CERN')
multipleFilesFileset.addFile(newFile)
newFile = File("/some/file/test2", size=2000, events=200)
newFile.addRun(Run(3, *[2, 8]))
newFile.addRun(Run(4, *[3, 8]))
newFile.setLocation('T2_CH_CERN')
multipleFilesFileset.addFile(newFile)
newFile = File("/some/file/test3", size=3000, events=300)
newFile.addRun(Run(5, *[10, 11, 12]))
newFile.addRun(Run(6, *[10, 11, 12]))
newFile.setLocation('T2_CH_CERN')
multipleFilesFileset.addFile(newFile)
newFile = File("/some/file/test4", size=4000, events=400)
newFile.addRun(Run(2, *[3, 8, 9]))
newFile.addRun(Run(3, *[3, 4, 5, 6]))
newFile.setLocation('T2_CH_CERN')
multipleFilesFileset.addFile(newFile)
multipleFilesFileset.create()
return multipleFilesFileset
def test05(self):
"""
_test05_
Test repacking of multiple lumis with holes in the lumi sequence
Multi lumi input
"""
mySplitArgs = self.splitArgs.copy()
insertClosedLumiBinds = []
for lumi in [1, 2, 4]:
filecount = 2
for i in range(filecount):
newFile = File(makeUUID(), size = 1000, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomeSE", immediateSave = False)
newFile.create()
self.fileset1.addFile(newFile)
insertClosedLumiBinds.append( { 'RUN' : 1,
'LUMI' : lumi,
'STREAM' : "A",
'FILECOUNT' : filecount,
'INSERT_TIME' : self.currentTime,
'CLOSE_TIME' : self.currentTime } )
self.fileset1.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription1)
self.insertClosedLumiDAO.execute(binds = insertClosedLumiBinds,
transaction = False)
mySplitArgs['maxInputFiles'] = 5
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
self.insertClosedLumiDAO.execute(binds = { 'RUN' : 1,
'LUMI' : 3,
'STREAM' : "A",
'FILECOUNT' : 0,
'INSERT_TIME' : self.currentTime,
'CLOSE_TIME' : self.currentTime },
transaction = False)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
self.assertEqual(len(jobGroups[0].jobs[0].getFiles()), 4,
"ERROR: first job does not process 4 files")
return
def testDeleteTransaction(self):
"""
_testDeleteTransaction_
Create a file and commit it to the database. Start a new transaction
and delete the file. Rollback the transaction after the file has been
deleted. Use the file class's exists() method to verify that the file
does not exist after it has been deleted but does exist after the
transaction is rolled back.
"""
testFile = File(lfn = "/this/is/a/lfn", size = 1024, events = 10,
checksums={'cksum': 1111})
assert testFile.exists() == False, \
"ERROR: File exists before it was created"
testFile.addRun(Run(1, *[45]))
testFile.create()
assert testFile.exists() > 0, \
"ERROR: File does not exist after it was created"
myThread = threading.currentThread()
myThread.transaction.begin()
testFile.delete()
assert testFile.exists() == False, \
"ERROR: File exists after it has been deleted"
myThread.transaction.rollback()
assert testFile.exists() > 0, \
"ERROR: File does not exist after transaction was rolled back."
return
def populateACDCCouch(self, numFiles=3, lumisPerJob=4, eventsPerJob=100, numberOfJobs=250):
"""
_populateACDCCouch_
Create production files in couchDB to test the creation
of ACDC jobs for the EventBased algorithm.
"""
# Define some constants
workflowName = "ACDC_TestEventBased"
filesetName = "/%s/Production" % workflowName
lumisPerFile = lumisPerJob * numberOfJobs
for i in range(numFiles):
lfn = "MCFakeFile-some-hash-%s" % str(i).zfill(5)
for j in range(numberOfJobs):
firstEvent = j * eventsPerJob + 1
acdcFile = File(lfn=lfn, size=1024, events=eventsPerJob, locations=self.validLocations,
merged=False, first_event=firstEvent)
run = Run(1, *range(1 + j * lumisPerJob + (i * lumisPerFile),
1 + (j + 1) * lumisPerJob + (i * lumisPerFile)))
acdcFile.addRun(run)
acdcDoc = {"collection_name": workflowName,
"collection_type": "ACDC.CollectionTypes.DataCollection",
"files": {lfn: acdcFile},
"fileset_name": filesetName}
self.couchDB.queue(acdcDoc)
self.couchDB.commit()
return
def test05(self):
"""
_test05_
Test multi lumis express merges with holes
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2, 4]:
for i in range(2):
newFile = File(makeUUID(), size = 1000, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
time.sleep(1)
mySplitArgs['maxLatency'] = 1
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 2,
"ERROR: JobFactory didn't create two jobs")
return
def testCreateWithLocation(self):
"""
_testCreateWithLocation_
Create a file and add a couple locations. Load the file from the
database to make sure that the locations were set correctly.
"""
testFileA = File(lfn = "/this/is/a/lfn", size = 1024, events = 10,
checksums = {'cksum':1},
locations = set(["T1_US_FNAL_Disk", "T2_CH_CERN"]))
testFileA.addRun(Run( 1, *[45]))
testFileA.create()
testFileB = File(id = testFileA["id"])
testFileB.loadData()
goldenLocations = ["T1_US_FNAL_Disk", "T2_CH_CERN"]
for location in testFileB["locations"]:
assert location in goldenLocations, \
"ERROR: Unknown file location"
goldenLocations.remove(location)
assert len(goldenLocations) == 0, \
"ERROR: Some locations are missing"
return
def testSetLocationByLFN(self):
"""
_testSetLocationByLFN_
Create a file and add a couple locations. Load the file from the
database to make sure that the locations were set correctly.
"""
testFileA = File(lfn = "/this/is/a/lfnA", size = 1024, events = 10,
checksums = {'cksum':1})
testFileA.addRun(Run( 1, *[45]))
testFileA.create()
testFileB = File(lfn = "/this/is/a/lfnB", size = 1024, events = 10,
checksums = {'cksum':1})
testFileB.addRun(Run( 1, *[45]))
testFileB.create()
parentAction = self.daofactory(classname = "Files.SetLocationByLFN")
binds = [{'lfn': "/this/is/a/lfnA", 'location': 'se1.fnal.gov'},
{'lfn': "/this/is/a/lfnB", 'location': 'se1.fnal.gov'}]
parentAction.execute(lfn = binds)
testFileC = File(id = testFileA["id"])
testFileC.loadData()
testFileD = File(id = testFileB["id"])
testFileD.loadData()
self.assertEqual(testFileC['locations'], set(['se1.fnal.gov']))
self.assertEqual(testFileD['locations'], set(['se1.fnal.gov']))
return
def testCreateTransaction(self):
"""
_testCreateTransaction_
Begin a transaction and then create a file in the database. Afterwards,
rollback the transaction. Use the File class's exists() method to
to verify that the file doesn't exist before it was created, exists
after it was created and doesn't exist after the transaction was rolled
back.
"""
myThread = threading.currentThread()
myThread.transaction.begin()
testFile = File(lfn = "/this/is/a/lfn", size = 1024, events = 10, checksums={'cksum':1111})
assert testFile.exists() == False, \
"ERROR: File exists before it was created"
testFile.addRun(Run(1, *[45]))
testFile.create()
assert testFile.exists() > 0, \
"ERROR: File does not exist after it was created"
myThread.transaction.rollback()
assert testFile.exists() == False, \
"ERROR: File exists after transaction was rolled back."
return
def createSubscription(self,
nFiles,
lumisPerFile,
twoSites=False,
rand=False):
"""
_createSubscription_
Create a subscription for testing
"""
baseName = makeUUID()
testFileset = Fileset(name=baseName)
testFileset.create()
parentFile = File('%s_parent' % baseName,
size=1000,
events=100,
locations=set(["T1_US_FNAL_Disk"]))
parentFile.create()
for i in range(nFiles):
newFile = File(lfn='%s_%i' % (baseName, i),
size=1000,
events=100,
locations="T1_US_FNAL_Disk")
lumis = []
for lumi in range(lumisPerFile):
if rand:
lumis.append(random.randint(1000 * i, 1000 * (i + 1)))
else:
lumis.append((100 * i) + lumi)
newFile.addRun(Run(i, *lumis))
newFile.create()
newFile.addParent(parentFile['lfn'])
testFileset.addFile(newFile)
if twoSites:
for i in range(nFiles):
newFile = File(lfn='%s_%i_2' % (baseName, i),
size=1000,
events=100,
locations="T2_CH_CERN")
lumis = []
for lumi in range(lumisPerFile):
if rand:
lumis.append(random.randint(1000 * i, 1000 * (i + 1)))
else:
lumis.append((100 * i) + lumi)
newFile.addRun(Run(i, *lumis))
newFile.create()
newFile.addParent(parentFile['lfn'])
testFileset.addFile(newFile)
testFileset.commit()
testSubscription = Subscription(fileset=testFileset,
workflow=self.testWorkflow,
split_algo="LumiBased",
type="Processing")
testSubscription.create()
return testSubscription
def createTestJob(subscriptionType="Merge"):
"""
_createTestJob_
Create a test job with two files as input. This will also create the
appropriate workflow, jobgroup and subscription.
"""
testWorkflow = Workflow(spec=makeUUID(), owner="Simon", name=makeUUID(), task="Test")
testWorkflow.create()
testWMBSFileset = Fileset(name="TestFileset")
testWMBSFileset.create()
testSubscription = Subscription(fileset=testWMBSFileset, workflow=testWorkflow, type=subscriptionType)
testSubscription.create()
testJobGroup = JobGroup(subscription=testSubscription)
testJobGroup.create()
testFileA = File(lfn="/this/is/a/lfnA", size=1024, events=10)
testFileA.addRun(Run(1, *[45]))
testFileB = File(lfn="/this/is/a/lfnB", size=1024, events=10)
testFileB.addRun(Run(1, *[46]))
testFileA.create()
testFileB.create()
testJob = Job(name=makeUUID(), files=[testFileA, testFileB])
testJob["couch_record"] = "somecouchrecord"
testJob["location"] = "test.site.ch"
testJob.create(group=testJobGroup)
testJob.associateFiles()
return testJob
def testD_NonContinuousLumis(self):
"""
_NonContinuousLumis_
Test and see if LumiBased can work when the lumis are non continuous
"""
baseName = makeUUID()
nFiles = 10
testFileset = Fileset(name = baseName)
testFileset.create()
for i in range(nFiles):
newFile = File(lfn = '%s_%i' % (baseName, i), size = 1000,
events = 100, locations = "somese.cern.ch")
# Set to two non-continuous lumi numbers
lumis = [100 + i, 200 + i]
newFile.addRun(Run(i, *lumis))
newFile.create()
testFileset.addFile(newFile)
testFileset.commit()
testSubscription = Subscription(fileset = testFileset,
workflow = self.testWorkflow,
split_algo = "LumiBased",
type = "Processing")
testSubscription.create()
splitter = SplitterFactory()
jobFactory = splitter(package = "WMCore.WMBS",
subscription = testSubscription)
jobGroups = jobFactory(lumis_per_job = 2,
halt_job_on_file_boundaries = False,
splitOnRun = False,
performance = self.performanceParams)
self.assertEqual(len(jobGroups), 1)
jobs = jobGroups[0].jobs
self.assertEqual(len(jobs), 10)
for j in jobs:
runs = j['mask'].getRunAndLumis()
for r in runs.keys():
self.assertEqual(len(runs[r]), 2)
for l in runs[r]:
# Each run should have two lumis
# Each lumi should be of form [x, x]
# meaning that the first and last lumis are the same
self.assertEqual(len(l), 2)
self.assertEqual(l[0], l[1])
self.assertEqual(j['estimatedJobTime'], 100 * 12)
self.assertEqual(j['estimatedDiskUsage'], 100 * 400)
self.assertEqual(j['estimatedMemoryUsage'], 2300)
return
def testAddDupsToFilesetBulk(self):
"""
_AddToDupsFilesetBulk_
Same as testAddDupsToFileset() but faster
"""
testWorkflowA = Workflow(spec = 'hello', owner = "mnorman",
name = "wf001", task="basicWorkload/Production")
testWorkflowA.create()
testWorkflowB = Workflow(spec = 'hello', owner = "mnorman",
name = "wf001", task="basicWorkload/Production2")
testWorkflowB.create()
testFilesetA = Fileset(name = "inputFilesetA")
testFilesetA.create()
testFilesetB = Fileset(name = "inputFilesetB")
testFilesetB.create()
testSubscriptionA = Subscription(workflow = testWorkflowA, fileset = testFilesetA)
testSubscriptionA.create()
testSubscriptionB = Subscription(workflow = testWorkflowB, fileset = testFilesetB)
testSubscriptionB.create()
testFileA = File(lfn = "/this/is/a/lfnA", size = 1024, events = 10, locations = ['SiteA'])
testFileA.addRun(Run( 1, *[45]))
testFileB = File(lfn = "/this/is/a/lfnB", size = 1024, events = 10, locations = ['SiteB'])
testFileB.addRun(Run( 1, *[45]))
addFilesToWMBSInBulk(testFilesetA.id, "wf001",
[testFileA, testFileB],
conn = testFileA.getDBConn(),
transaction = testFileA.existingTransaction())
testFileset2 = Fileset(name = "inputFilesetA")
testFileset2.loadData()
self.assertEqual(len(testFileset2.files), 2)
for file in testFileset2.files:
self.assertTrue(file in [testFileA, testFileB])
# Check that adding twice doesn't crash
addFilesToWMBSInBulk(testFilesetA.id, "wf001",
[testFileA, testFileB],
conn = testFileA.getDBConn(),
transaction = testFileA.existingTransaction())
# Files should not get added to fileset B because fileset A is associated
# with wf001.
addFilesToWMBSInBulk(testFilesetB.id, "wf001",
[testFileA, testFileB],
conn = testFileA.getDBConn(),
transaction = testFileA.existingTransaction())
testFileset2 = Fileset(name = "inputFilesetB")
testFileset2.loadData()
self.assertEqual(len(testFileset2.files), 0)
return
def notestTwoJobGroups(self):
"""
Test two job groups with a shared fileset. (Minimal part of testGetLocations which was failing)
"""
testWorkflow1 = Workflow(spec="spec.xml",
owner="Simon",
name="wf001",
task="Test1")
testWorkflow1.create()
testWMBSFileset1 = WMBSFileset(name="TestFileset1")
testWMBSFileset1.create()
testSubscription1 = Subscription(fileset=testWMBSFileset1,
workflow=testWorkflow1)
testSubscription1.create()
testJobGroup1 = JobGroup(subscription=testSubscription1)
testJobGroup1.create()
testFileA = File(lfn="/this/is/a/lfnA", size=1024, events=10)
testFileA.addRun(Run(10, *[12312]))
testFileA.create()
testJobA = Job(name="TestJobA")
testJobA.addFile(testFileA)
testJobGroup1.add(testJobA)
testJobGroup1.commit()
testWorkflow2 = Workflow(spec="spec.xml",
owner="Simon",
name="wf002",
task="Test2")
testWorkflow2.create()
testWMBSFileset2 = WMBSFileset(name="TestFileset1")
testWMBSFileset2.create()
testSubscription2 = Subscription(fileset=testWMBSFileset2,
workflow=testWorkflow2)
testSubscription2.create()
testJobGroup2 = JobGroup(subscription=testSubscription2)
testJobGroup2.create()
testFileC = File(lfn="/this/is/a/lfnC", size=1024, events=10)
testFileC.addRun(Run(10, *[12312]))
testFileC.create()
testJobA1 = Job(name="TestJobA1")
testJobA1.addFile(testFileC)
testJobGroup2.add(testJobA1)
testJobGroup2.commit()
def testAddDupsToFileset(self):
"""
_AddToDupsFileset_
Verify the the dups version of the AddToFileset DAO will not add files
to a fileset if they're already associated to another fileset with the
same workflow.
"""
testWorkflowA = Workflow(spec = 'hello', owner = "mnorman",
name = "wf001", task="basicWorkload/Production")
testWorkflowA.create()
testWorkflowB = Workflow(spec = 'hello', owner = "mnorman",
name = "wf001", task="basicWorkload/Production2")
testWorkflowB.create()
testFilesetA = Fileset(name = "inputFilesetA")
testFilesetA.create()
testFilesetB = Fileset(name = "inputFilesetB")
testFilesetB.create()
testSubscriptionA = Subscription(workflow = testWorkflowA, fileset = testFilesetA)
testSubscriptionA.create()
testSubscriptionB = Subscription(workflow = testWorkflowB, fileset = testFilesetB)
testSubscriptionB.create()
testFileA = File(lfn = "/this/is/a/lfnA", size = 1024, events = 10)
testFileA.addRun(Run( 1, *[45]))
testFileA.create()
testFileB = File(lfn = "/this/is/a/lfnB", size = 1024, events = 10)
testFileB.addRun(Run( 1, *[45]))
testFileB.create()
addToFileset = self.daofactory(classname = "Files.AddDupsToFileset")
addToFileset.execute(file = [testFileA['lfn'], testFileB['lfn']],
fileset = testFilesetA.id, workflow = "wf001")
testFileset2 = Fileset(name = "inputFilesetA")
testFileset2.loadData()
self.assertEqual(len(testFileset2.files), 2)
for file in testFileset2.files:
self.assertTrue(file in [testFileA, testFileB])
# Check that adding twice doesn't crash
addToFileset.execute(file = [testFileA['lfn'], testFileB['lfn']],
fileset = testFilesetA.id, workflow = "wf001")
# Files should not get added to fileset B because fileset A is associated
# with wf001.
addToFileset.execute(file = [testFileA['lfn'], testFileB['lfn']],
fileset = testFilesetB.id, workflow = "wf001")
testFileset2 = Fileset(name = "inputFilesetB")
testFileset2.loadData()
self.assertEqual(len(testFileset2.files), 0)
return
def test06(self):
"""
_test06_
Test max input files threshold for multi lumi
3 same size lumis
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2, 3]:
for i in range(2):
newFile = File(makeUUID(), size = 1000, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
mySplitArgs['minInputSize'] = 3000
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
mySplitArgs['maxInputFiles'] = 5
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 4,
"ERROR: Job does not process 4 files")
self.fileset2.markOpen(False)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
return
def setUp(self):
"""
_setUp_
"""
self.testInit = TestInit(__file__)
self.testInit.setLogging()
self.testInit.setDatabaseConnection()
self.testInit.setSchema(customModules=["WMCore.WMBS"])
self.splitterFactory = SplitterFactory(package="WMCore.JobSplitting")
myThread = threading.currentThread()
self.myThread = myThread
daoFactory = DAOFactory(package="WMCore.WMBS",
logger=logging,
dbinterface=myThread.dbi)
self.WMBSFactory = daoFactory
config = self.getConfig()
self.changer = ChangeState(config)
myResourceControl = ResourceControl()
myResourceControl.insertSite("T1_US_FNAL", 10, 20, "T1_US_FNAL_Disk",
"T1_US_FNAL")
myResourceControl.insertSite("T1_US_FNAL", 10, 20, "T3_US_FNALLPC",
"T1_US_FNAL")
myResourceControl.insertSite("T2_CH_CERN", 10, 20, "T2_CH_CERN",
"T2_CH_CERN")
self.fileset1 = Fileset(name="TestFileset1")
for fileNum in range(11):
newFile = File("/some/file/name%d" % fileNum,
size=1000,
events=100)
newFile.addRun(Run(1, *[1]))
newFile.setLocation('T1_US_FNAL_Disk')
self.fileset1.addFile(newFile)
self.fileset1.create()
workflow1 = Workflow(spec="spec.xml",
owner="hufnagel",
name="TestWorkflow1",
task="Test")
workflow1.create()
self.subscription1 = Subscription(fileset=self.fileset1,
workflow=workflow1,
split_algo="Harvest",
type="Harvesting")
self.subscription1.create()
self.configFile = EmulatorSetup.setupWMAgentConfig()
return
def test06(self):
"""
_test06_
Test max input files threshold for multi lumi
3 same size lumis
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2, 3]:
for i in range(2):
newFile = File(makeUUID(), size = 1000, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
mySplitArgs['minInputSize'] = 3000
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
mySplitArgs['maxInputFiles'] = 5
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 4,
"ERROR: Job does not process 4 files")
self.fileset2.markOpen(False)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
return
def test00(self):
"""
_test00_
Test that the job name prefix feature works
Test max edm size threshold for single lumi
small lumi, followed by over-large lumi
expect 1 job for small lumi and 4 jobs for over-large
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2]:
for i in range(2 * lumi):
newFile = File(makeUUID(), size = 1000 * lumi * lumi, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
mySplitArgs['maxEdmSize'] = 13000
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 3,
"ERROR: JobFactory didn't create three jobs")
job = jobGroups[0].jobs[0]
self.assertTrue(job['name'].startswith("RepackMerge-"),
"ERROR: Job has wrong name")
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
job = jobGroups[0].jobs[1]
self.assertEqual(len(job.getFiles()), 3,
"ERROR: Job does not process 3 files")
job = jobGroups[0].jobs[2]
self.assertEqual(len(job.getFiles()), 1,
"ERROR: Job does not process 1 file")
return
def test00(self):
"""
_test00_
Test that the job name prefix feature works
Test max edm size threshold for single lumi
small lumi, followed by over-large lumi
expect 1 job for small lumi and 4 jobs for over-large
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2]:
for i in range(2 * lumi):
newFile = File(makeUUID(), size = 1000 * lumi * lumi, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
mySplitArgs['maxEdmSize'] = 13000
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 3,
"ERROR: JobFactory didn't create three jobs")
job = jobGroups[0].jobs[0]
self.assertTrue(job['name'].startswith("RepackMerge-"),
"ERROR: Job has wrong name")
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
job = jobGroups[0].jobs[1]
self.assertEqual(len(job.getFiles()), 3,
"ERROR: Job does not process 3 files")
job = jobGroups[0].jobs[2]
self.assertEqual(len(job.getFiles()), 1,
"ERROR: Job does not process 1 file")
return
def _addDBSFileToWMBSFile(self, dbsFile, storageElements, inFileset=True):
"""
There are two assumptions made to make this method behave properly,
1. DBS returns only one level of ParentList.
If DBS returns multiple level of parentage, it will be still get handled.
However that might not be what we wanted. In that case, restrict to one level.
2. Assumes parents files are in the same location as child files.
This is not True in general case, but workquue should only select work only
where child and parent files are in the same location
"""
# TODO get dbsFile with lumi event information
wmbsParents = []
dbsFile.setdefault("ParentList", [])
for parent in dbsFile["ParentList"]:
wmbsParents.append(
self._addDBSFileToWMBSFile(parent,
storageElements,
inFileset=False))
checksums = {}
if dbsFile.get('Checksum'):
checksums['cksum'] = dbsFile['Checksum']
if dbsFile.get('Adler32'):
checksums['adler32'] = dbsFile['Adler32']
wmbsFile = File(
lfn=dbsFile["LogicalFileName"],
size=dbsFile["FileSize"],
events=dbsFile["NumberOfEvents"],
checksums=checksums,
# TODO: need to get list of parent lfn
parents=wmbsParents,
locations=set(storageElements))
for lumi in dbsFile['LumiList']:
if isinstance(lumi['LumiSectionNumber'], list):
lumiSecList = (
list(zip(lumi['LumiSectionNumber'], lumi['EventCount']))
if 'EventCount' in lumi else lumi['LumiSectionNumber'])
run = Run(lumi['RunNumber'], lumiSecList)
else:
lumiSecTuple = ((lumi['LumiSectionNumber'],
lumi['EventCount']) if 'EventCount' in lumi
else lumi['LumiSectionNumber'])
run = Run(lumi['RunNumber'], lumiSecTuple)
wmbsFile.addRun(run)
self._addToDBSBuffer(dbsFile, checksums, storageElements)
logging.debug("WMBS File: %s on Location: %s", wmbsFile['lfn'],
wmbsFile['newlocations'])
wmbsFile['inFileset'] = bool(inFileset)
self.wmbsFilesToCreate.add(wmbsFile)
return wmbsFile
def test10(self):
"""
_test10_
Test merging of multiple lumis with holes in the lumi sequence
Hole is due to no streamer files for the lumi
Multi lumi input
It only works with a single hole, as it creates a merged file even with it being of a smaller size than the mininputsize.
It was changed due to the maxinputevents not being used anymore
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2, 4]:
for i in range(2):
newFile = File(makeUUID(), size=1000, events=100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave=False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package="WMCore.WMBS",
subscription=self.subscription2)
mySplitArgs['minInputSize'] = 100000
mySplitArgs['maxInputSize'] = 200000
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
self.insertClosedLumiDAO.execute(binds={
'RUN': 1,
'LUMI': 3,
'STREAM': "A",
'FILECOUNT': 0,
'INSERT_TIME': self.currentTime,
'CLOSE_TIME': self.currentTime
},
transaction=False)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 4,
"ERROR: Job does not process 4 files")
return
def test09(self):
"""
_test09_
Test under merge (over merge event threshold)
one small lumi, one large lumi (small below min size,
large below max size, but both together above max size)
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2]:
for i in range(2):
newFile = File(makeUUID(), size = 1000 * lumi * lumi, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
mySplitArgs['minInputSize'] = 3000
mySplitArgs['maxInputSize'] = 9000
mySplitArgs['maxInputEvents'] = 300
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
self.fileset2.markOpen(False)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
return
def test09(self):
"""
_test09_
Test under merge (over merge event threshold)
one small lumi, one large lumi (small below min size,
large below max size, but both together above max size)
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2]:
for i in range(2):
newFile = File(makeUUID(), size = 1000 * lumi * lumi, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
mySplitArgs['minInputSize'] = 3000
mySplitArgs['maxInputSize'] = 9000
mySplitArgs['maxInputEvents'] = 300
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
self.fileset2.markOpen(False)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 2,
"ERROR: Job does not process 2 files")
return
def addMCFakeFile(self):
"""Add a fake file for wmbs to run production over"""
needed = [
'FirstEvent', 'FirstLumi', 'FirstRun', 'LastEvent', 'LastLumi',
'LastRun'
]
for key in needed:
if self.mask and self.mask.get(key) is None:
msg = 'Invalid value "%s" for %s' % (self.mask.get(key), key)
raise WorkQueueWMBSException(msg)
locations = set()
siteInfo = self.getLocationInfo.execute(
conn=self.getDBConn(), transaction=self.existingTransaction())
for site in siteInfo:
if site['pnn'] in self.commonLocation:
locations.add(site['pnn'])
if not locations:
msg = 'No locations to inject Monte Carlo work to, unable to proceed'
raise WorkQueueWMBSException(msg)
mcFakeFileName = ("MCFakeFile-%s" % self.topLevelFileset.name).encode(
'ascii', 'ignore')
wmbsFile = File(
lfn=mcFakeFileName,
first_event=self.mask['FirstEvent'],
last_event=self.mask['LastEvent'],
events=self.mask['LastEvent'] - self.mask['FirstEvent'] +
1, # inclusive range
locations=locations,
merged=False, # merged causes dbs parentage relation
)
if self.mask:
lumis = list(
range(self.mask['FirstLumi'],
self.mask['LastLumi'] + 1)) # inclusive range
wmbsFile.addRun(Run(self.mask['FirstRun'],
*lumis)) # assume run number static
else:
wmbsFile.addRun(Run(1, 1))
wmbsFile['inFileset'] = True # file is not a parent
logging.debug("WMBS MC Fake File: %s on Location: %s", wmbsFile['lfn'],
wmbsFile['newlocations'])
self.wmbsFilesToCreate.add(wmbsFile)
totalFiles = self.topLevelFileset.addFilesToWMBSInBulk(
self.wmbsFilesToCreate, self.wmSpec.name(), isDBS=self.isDBS)
self.topLevelFileset.markOpen(False)
return totalFiles
def _addACDCFileToWMBSFile(self, acdcFile, inFileset=True):
"""
adds the ACDC files into WMBS database
"""
wmbsParents = []
# TODO: this check can be removed when ErrorHandler filters parents file for unmerged data
if acdcFile["parents"]:
firstParent = next(iter(acdcFile["parents"]))
# If files is merged and has unmerged parents skip the wmbs population
if acdcFile.get("merged", 0) and ("/store/unmerged/" in firstParent
or "MCFakeFile" in firstParent):
# don't set the parents
pass
else:
# set the parentage for all the unmerged parents
for parent in acdcFile["parents"]:
logging.debug("WMBS ACDC Parent File: %s", parent)
parent = self._addACDCFileToWMBSFile(DatastructFile(
lfn=parent,
locations=acdcFile["locations"],
merged=True),
inFileset=False)
wmbsParents.append(parent)
# pass empty check sum since it won't be updated to dbs anyway
checksums = {}
wmbsFile = File(lfn=str(acdcFile["lfn"]),
size=acdcFile["size"],
events=acdcFile["events"],
first_event=acdcFile.get('first_event', 0),
last_event=acdcFile.get('last_event', 0),
checksums=checksums,
parents=wmbsParents,
locations=acdcFile["locations"],
merged=acdcFile.get('merged', True))
## TODO need to get the lumi lists
for run in acdcFile['runs']:
wmbsFile.addRun(run)
if not acdcFile["lfn"].startswith("/store/unmerged") or wmbsParents:
# only add to DBSBuffer if is not unmerged file or it has parents.
dbsFile = self._convertACDCFileToDBSFile(acdcFile)
self._addToDBSBuffer(dbsFile, checksums, acdcFile["locations"])
logging.debug("WMBS ACDC File: %s on Location: %s", wmbsFile['lfn'],
wmbsFile['newlocations'])
wmbsFile['inFileset'] = bool(inFileset)
self.wmbsFilesToCreate.add(wmbsFile)
return wmbsFile
def test10(self):
"""
_test10_
Test merging of multiple lumis with holes in the lumi sequence
Hole is due to no streamer files for the lumi
Multi lumi input
It only works with a single hole, as it creates a merged file even with it being of a smaller size than the mininputsize.
It was changed due to the maxinputevents not being used anymore
"""
mySplitArgs = self.splitArgs.copy()
for lumi in [1, 2, 4]:
for i in range(2):
newFile = File(makeUUID(), size = 1000, events = 100)
newFile.addRun(Run(1, *[lumi]))
newFile.setLocation("SomePNN", immediateSave = False)
newFile.create()
self.fileset2.addFile(newFile)
self.fileset2.commit()
jobFactory = self.splitterFactory(package = "WMCore.WMBS",
subscription = self.subscription2)
mySplitArgs['minInputSize'] = 100000
mySplitArgs['maxInputSize'] = 200000
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 0,
"ERROR: JobFactory should have returned no JobGroup")
self.insertClosedLumiDAO.execute(binds = { 'RUN' : 1,
'LUMI' : 3,
'STREAM' : "A",
'FILECOUNT' : 0,
'INSERT_TIME' : self.currentTime,
'CLOSE_TIME' : self.currentTime },
transaction = False)
jobGroups = jobFactory(**mySplitArgs)
self.assertEqual(len(jobGroups), 1,
"ERROR: JobFactory didn't return one JobGroup")
self.assertEqual(len(jobGroups[0].jobs), 1,
"ERROR: JobFactory didn't create one job")
job = jobGroups[0].jobs[0]
self.assertEqual(len(job.getFiles()), 4,
"ERROR: Job does not process 4 files")
return
def createLargerTestJobGroup(self, commitFlag=True):
"""
_createTestJobGroup_
"""
testWorkflow = Workflow(spec="spec.xml",
owner="Simon",
name="wf001",
task="Test")
testWorkflow.create()
testWMBSFileset = WMBSFileset(name="TestFileset")
testWMBSFileset.create()
testSubscription = Subscription(fileset=testWMBSFileset,
workflow=testWorkflow)
testSubscription.create()
testJobGroup = JobGroup(subscription=testSubscription)
testJobGroup.create()
testFileC = File(lfn="/this/is/a/lfnC", size=1024, events=10)
testFileC.addRun(Run(10, *[12312]))
testFileC.setLocation("goodse.cern.ch")
testFileC.setLocation("malpaquet")
testFileD = File(lfn="/this/is/a/lfnD", size=1024, events=10)
testFileD.addRun(Run(10, *[12312]))
testFileD.setLocation("goodse.cern.ch")
testFileD.setLocation("malpaquet")
testFileC.create()
testFileD.create()
testJobA = Job(name="TestJobA1")
testJobA.addFile(testFileC)
testJobB = Job(name="TestJobB1")
testJobB.addFile(testFileD)
testJobGroup.add(testJobA)
testJobGroup.add(testJobB)
for i in range(0, 100):
testJob = Job(name="TestJob%i" % (i))
testJob.addFile(testFileC)
testJobGroup.add(testJob)
if commitFlag:
testJobGroup.commit()
return testJobGroup
def createFile(self, lfn, events, run, lumis, location):
"""
_createFile_
Create a file for testing
"""
newFile = File(lfn=lfn, size=1000, events=events)
lumiList = []
for lumi in range(lumis):
lumiList.append((run * lumis) + lumi)
newFile.addRun(Run(run, *lumiList))
newFile.setLocation(location)
return newFile
def createFile(self, lfn, events, run, lumis, location):
"""
_createFile_
Create a file for testing
"""
newFile = File(lfn=lfn, size=1000, events=events)
lumiList = []
for lumi in range(lumis):
lumiList.append((run * lumis) + lumi)
newFile.addRun(Run(run, *lumiList))
newFile.setLocation(location)
return newFile
def testLocationMerging(self):
"""
_testLocationMerging_
Verify that files residing on different SEs are not merged together in
the same job.
"""
self.stuffWMBS()
locationAction = self.daoFactory(classname="Locations.New")
locationAction.execute(siteName="s2", seName="somese3.cern.ch")
fileSite2 = File(lfn="fileSite2",
size=4098,
events=1024,
first_event=0,
locations=set(["somese3.cern.ch"]))
fileSite2.addRun(Run(1, *[46]))
fileSite2.create()
fileSite2.addParent(self.parentFileSite2["lfn"])
self.mergeFileset.addFile(fileSite2)
self.mergeFileset.commit()
splitter = SplitterFactory()
jobFactory = splitter(package="WMCore.WMBS",
subscription=self.mergeSubscription)
result = jobFactory(min_merge_size=4097,
max_merge_size=99999999,
max_merge_events=999999999)
assert len(result) == 1, \
"ERROR: More than one JobGroup returned."
assert len(result[0].jobs) == 2, \
"ERROR: Two jobs should have been returned."
for job in result[0].jobs:
firstInputFile = job.getFiles()[0]
baseLocation = list(firstInputFile["locations"])[0]
for inputFile in job.getFiles():
assert inputFile["locations"] == set(["somese.cern.ch", "somese2.cern.ch"]) or \
inputFile["locations"] == set(["somese3.cern.ch"]), \
"Error: Wrong number of locations"
assert list(inputFile["locations"])[0] == baseLocation, \
"Error: Wrong location."
return
def createSubscription(self, nFiles, lumisPerFile, twoSites = False, rand = False):
"""
_createSubscription_
Create a subscription for testing
"""
baseName = makeUUID()
testFileset = Fileset(name = baseName)
testFileset.create()
parentFile = File('%s_parent' % (baseName), size = 1000, events = 100,
locations = set(["somese.cern.ch"]))
parentFile.create()
for i in range(nFiles):
newFile = File(lfn = '%s_%i' % (baseName, i), size = 1000,
events = 100, locations = "somese.cern.ch")
lumis = []
for lumi in range(lumisPerFile):
if rand:
lumis.append(random.randint(1000 * i, 1000 * (i + 1)))
else:
lumis.append((100 * i) + lumi)
newFile.addRun(Run(i, *lumis))
newFile.create()
newFile.addParent(parentFile['lfn'])
testFileset.addFile(newFile)
if twoSites:
for i in range(nFiles):
newFile = File(lfn = '%s_%i_2' % (baseName, i), size = 1000,
events = 100, locations = "otherse.cern.ch")
lumis = []
for lumi in range(lumisPerFile):
if rand:
lumis.append(random.randint(1000 * i, 1000 * (i + 1)))
else:
lumis.append((100 * i) + lumi)
newFile.addRun(Run(i, *lumis))
newFile.create()
newFile.addParent(parentFile['lfn'])
testFileset.addFile(newFile)
testFileset.commit()
testSubscription = Subscription(fileset = testFileset,
workflow = self.testWorkflow,
split_algo = "LumiBased",
type = "Processing")
testSubscription.create()
return testSubscription
def createTestJobs(self, nJobs, cacheDir):
"""
_createTestJobs_
Create several jobs
"""
testWorkflow = Workflow(spec="spec.xml",
owner="Simon",
name="wf001",
task="Test")
testWorkflow.create()
testWMBSFileset = Fileset(name="TestFileset")
testWMBSFileset.create()
testSubscription = Subscription(fileset=testWMBSFileset,
workflow=testWorkflow,
type="Processing",
split_algo="FileBased")
testSubscription.create()
testJobGroup = JobGroup(subscription=testSubscription)
testJobGroup.create()
# Create a file
testFileA = File(lfn="/this/is/a/lfnA", size=1024, events=10)
testFileA.addRun(Run(10, *[12312]))
testFileA.setLocation('malpaquet')
testFileA.create()
baseName = makeUUID()
# Now create a job
for i in range(nJobs):
testJob = Job(name='%s-%i' % (baseName, i))
testJob.addFile(testFileA)
testJob['location'] = 'malpaquet'
testJob['retry_count'] = 1
testJob['retry_max'] = 10
testJob.create(testJobGroup)
testJob.save()
testJobGroup.add(testJob)
testJobGroup.commit()
# Set test job caches
for job in testJobGroup.jobs:
job.setCache(cacheDir)
return testJobGroup
def testLocationMerging(self):
"""
_testLocationMerging_
Verify that files residing on different SEs are not merged together in
the same job.
"""
self.stuffWMBS()
locationAction = self.daoFactory(classname="Locations.New")
locationAction.execute(siteName="T1_UK_RAL", pnn="T1_UK_RAL_Disk")
fileSite2 = File(lfn="fileRAL",
size=4098,
events=1024,
first_event=0,
locations=set(["T1_UK_RAL_Disk"]))
fileSite2.addRun(Run(1, *[46]))
fileSite2.create()
self.mergeFileset.addFile(fileSite2)
self.mergeFileset.commit()
splitter = SplitterFactory()
jobFactory = splitter(package="WMCore.WMBS",
subscription=self.mergeSubscription)
result = jobFactory(min_merge_size=4097,
max_merge_size=99999999,
max_merge_events=999999999,
merge_across_runs=False)
assert len(result) == 1, \
"ERROR: More than one JobGroup returned."
assert len(result[0].jobs) == 3, \
"ERROR: Three jobs should have been returned."
ralJobs = 0
fnalJobs = 0
for job in result[0].jobs:
if job["possiblePSN"] == set(["T1_UK_RAL"]):
ralJobs += 1
elif job["possiblePSN"] == set(["T1_US_FNAL"]):
fnalJobs += 1
self.assertEqual(ralJobs, 1)
self.assertEqual(fnalJobs, 2)
return
def _addDBSFileToWMBSFile(self, dbsFile, storageElements, inFileset = True):
"""
There are two assumptions made to make this method behave properly,
1. DBS returns only one level of ParentList.
If DBS returns multiple level of parentage, it will be still get handled.
However that might not be what we wanted. In that case, restrict to one level.
2. Assumes parents files are in the same location as child files.
This is not True in general case, but workquue should only select work only
where child and parent files are in the same location
"""
wmbsParents = []
dbsFile.setdefault("ParentList", [])
for parent in dbsFile["ParentList"]:
wmbsParents.append(self._addDBSFileToWMBSFile(parent,
storageElements, inFileset = False))
checksums = {}
if dbsFile.get('Checksum'):
checksums['cksum'] = dbsFile['Checksum']
if dbsFile.get('Adler32'):
checksums['adler32'] = dbsFile['Adler32']
wmbsFile = File(lfn = dbsFile["LogicalFileName"],
size = dbsFile["FileSize"],
events = dbsFile["NumberOfEvents"],
checksums = checksums,
#TODO: need to get list of parent lfn
parents = wmbsParents,
locations = set(storageElements))
for lumi in dbsFile['LumiList']:
if type(lumi['LumiSectionNumber']) == list:
run = Run(lumi['RunNumber'], *lumi['LumiSectionNumber'])
else:
run = Run(lumi['RunNumber'], lumi['LumiSectionNumber'])
wmbsFile.addRun(run)
self._addToDBSBuffer(dbsFile, checksums, storageElements)
logging.info("WMBS File: %s\n on Location: %s"
% (wmbsFile['lfn'], wmbsFile['newlocations']))
if inFileset:
wmbsFile['inFileset'] = True
else:
wmbsFile['inFileset'] = False
self.wmbsFilesToCreate.append(wmbsFile)
return wmbsFile
