Python kappa_alignment_request Examples

Example #1

File: EDPluginSTACOrientationv2_0.py Project: olofsvensson/edna-plugins-mx

 def fetchOutput(self):
     """
     method for reading back the specific output
     """
     self.xsKappaAlignmentRequest = kappa_alignment_request()
     self.xsKappaAlignmentRequest = kappa_alignment_request.parseFile(os.path.join(self.getWorkingDirectory(), "DNA_kappa_alignment_request"))
     return self.xsKappaAlignmentRequest

Example #2

File: EDPluginSTACOrientationv2_0.py Project: IvarsKarpics/edna-mx

 def fetchOutput(self):
     """
     method for reading back the specific output
     """
     self.xsKappaAlignmentRequest = kappa_alignment_request()
     strXml = EDUtilsFile.readFile(os.path.join(self.getWorkingDirectory(), "DNA_kappa_alignment_request"))
     strXml = strXml.replace("°", " degrees")
     self.xsKappaAlignmentRequest = kappa_alignment_request.parseString(strXml)
     return self.xsKappaAlignmentRequest

Example #3

 def fetchOutput(self):
     """
     method for reading back the specific output
     """
     self.xsKappaAlignmentRequest = kappa_alignment_request()
     self.xsKappaAlignmentRequest = kappa_alignment_request.parseFile(
         os.path.join(self.getWorkingDirectory(),
                      "DNA_kappa_alignment_request"))
     return self.xsKappaAlignmentRequest

Example #4

File: EDPluginSTACOrientationv2_0.py Project: yayahjb/edna-mx

 def fetchOutput(self):
     """
     method for reading back the specific output
     """
     self.xsKappaAlignmentRequest = kappa_alignment_request()
     strXml = EDUtilsFile.readFile(
         os.path.join(self.getWorkingDirectory(),
                      "DNA_kappa_alignment_request"))
     strXml = strXml.replace("°", " degrees")
     self.xsKappaAlignmentRequest = kappa_alignment_request.parseString(
         strXml)
     return self.xsKappaAlignmentRequest