def kropff_fitting_range_changed(self):
[global_left_range, global_right_range] = self.bragg_edge_range
if not self.fitting_peak_ui:
return
[left_range, right_range] = list(self.fitting_peak_ui.getRegion())
xaxis_dict = self.fitting_input_dictionary['xaxis']
o_get = Get(parent=self)
x_axis_selected = o_get.x_axis_checked()
xaxis_index, _ = xaxis_dict[x_axis_selected]
[left_xaxis_index, right_xaxis_index] = self.bragg_edge_range
xaxis = xaxis_index[left_xaxis_index: right_xaxis_index]
left_index = find_nearest_index(array=xaxis, value=left_range)
right_index = find_nearest_index(array=xaxis, value=right_range)
global_left_index = find_nearest_index(array=xaxis, value=global_left_range)
global_right_index = find_nearest_index(array=xaxis, value=global_right_range)
self.kropff_fitting_range['high'] = [right_index, global_right_index]
self.kropff_fitting_range['low'] = [global_left_index, left_index]
self.kropff_fitting_range['bragg_peak'] = [left_index, right_index]
self.bragg_peak_selection_range = [left_index, right_index]
o_kropff = Kropff(parent=self)
o_kropff.update_roi_labels()
def calculate_bin_size_in_all_units(self):
current_value = np.float(
self.parent.ui.selection_bin_size_value.text())
o_get = Get(parent=self.parent)
current_axis_name = o_get.x_axis_name_checked()
tof_array_s = self.parent.tof_array_s
lambda_array = self.parent.lambda_array
if current_axis_name == 'index':
current_value = np.int(current_value)
bin_index = current_value
bin_tof = tof_array_s[current_value]
bin_lambda = lambda_array[current_value]
elif current_axis_name == 'tof':
bin_index = find_nearest_index(array=tof_array_s,
value=current_value * 1e-6)
bin_tof = current_value
bin_lambda = lambda_array[bin_index]
elif current_axis_name == 'lambda':
bin_index = find_nearest_index(array=lambda_array,
value=current_value)
bin_tof = tof_array_s[bin_index]
bin_lambda = current_value
self.parent.bin_size_value = {
'index': bin_index,
'tof': bin_tof,
'lambda': bin_lambda
}
def update_roi_labels(self):
[global_left_range, global_right_range] = self.parent.bragg_edge_range
[left_range, right_range] = list(self.parent.fitting_peak_ui.getRegion())
o_get = Get(parent=self.parent)
x_axis_selected = o_get.x_axis_checked()
xaxis_dict = self.parent.fitting_input_dictionary['xaxis']
xaxis_index, _ = xaxis_dict[x_axis_selected]
[left_xaxis_index, right_xaxis_index] = [global_left_range, global_right_range]
xaxis = xaxis_index[left_xaxis_index: right_xaxis_index]
left_index = find_nearest_index(array=xaxis, value=left_range)
right_index = find_nearest_index(array=xaxis, value=right_range)
xaxis_in_selected_axis = self.parent.fitting_input_dictionary['xaxis'][x_axis_selected][0][
global_left_range: global_right_range]
real_left_value = xaxis_in_selected_axis[left_index]
real_right_value = xaxis_in_selected_axis[right_index]
if x_axis_selected == 'lambda':
str_format = "{:02f}"
elif x_axis_selected == 'tof':
str_format = "{:04.2f}"
else:
str_format = "{}"
real_left_value = str_format.format(real_left_value)
real_right_value = str_format.format(real_right_value)
units = Get.units(name=x_axis_selected)
self.parent.ui.bragg_peak_range_from_value.setText(str(real_left_value))
self.parent.ui.bragg_peak_range_to_value.setText(str(real_right_value))
self.parent.ui.from_bragg_peak_range_units.setText(units)
self.parent.ui.to_bragg_peak_range_units.setText(units)
def bragg_edge_range_changed(self):
[left_range, right_range] = list(self.bragg_edge_range_ui.getRegion())
o_get = Get(parent=self)
x_axis, _ = o_get.x_axis()
left_index = find_nearest_index(array=x_axis, value=left_range)
right_index = find_nearest_index(array=x_axis, value=right_range)
self.bragg_edge_range = [left_index, right_index]
def profile_selection_range_changed(self):
"""this method converts the ROI left and right position in current x-axis units to index units """
[left_range, right_range] = list(self.profile_selection_range_ui.getRegion())
o_get = Get(parent=self)
x_axis, _ = o_get.x_axis()
left_index = find_nearest_index(array=x_axis, value=left_range)
right_index = find_nearest_index(array=x_axis, value=right_range)
self.profile_selection_range = [left_index, right_index]
def initialize_default_peak_regions(self):
[left_range, right_range] = self.bragg_edge_range
xaxis_dict = self.fitting_input_dictionary['xaxis']
xaxis_index, _ = xaxis_dict['index']
[left_xaxis_index, right_xaxis_index] = self.bragg_edge_range
xaxis = xaxis_index[left_xaxis_index: right_xaxis_index]
left_index = find_nearest_index(array=xaxis, value=left_range)
right_index = find_nearest_index(array=xaxis, value=right_range)
# kropff tab
for _key in self.kropff_fitting_range.keys():
self.kropff_fitting_range[_key] = [left_index, right_index]
# TBD tab
pass