def retrieve_scale_metrics(runs, metrics, scaled_steps):
for run in runs:
if run.get('source') == 'tf_summary':
run_len = len(run['data'])
run_range = range(run_len)[scaled_steps.start:
scaled_steps.stop:
scaled_steps.step]
run_scaled_data = []
for i in run_range:
run_scaled_data.append(run['data'][i])
run['data'] = run_scaled_data
else:
# Retrieve aim metrics
branch_path = os.path.join(PROJECT_PATH, run['branch'])
storage_path = get_run_objects_path(branch_path, run['hash'])
run['data'] = []
records_storage = Storage(storage_path, 'r')
for metric in metrics:
try:
records_storage.open(metric,
uncommitted_bucket_visible=True)
for r in records_storage.read_records(metric,
scaled_steps):
base, metric_record = Metric.deserialize(r)
run['data'].append({
'value': metric_record.value,
'step': base.step,
'epoch': base.epoch if base.has_epoch else None,
})
records_storage.close()
except:
pass
def test_simple_int(self):
len = 1000
with tempfile.TemporaryDirectory() as temp_dir:
storage_writer = Storage(temp_dir, 'w')
storage_writer.open('loss')
for i in range(len):
storage_writer.append_record('loss', str(i).encode())
storage_writer.close('loss')
storage_writer.open('accuracy')
for i in range(len, 2*len):
storage_writer.append_record('accuracy', str(i).encode())
storage_writer.close('accuracy')
del storage_writer
storage_reader = Storage(temp_dir, 'r')
storage_reader.open('loss')
assert storage_reader.get_records_num('loss') == len
for i, record in enumerate(storage_reader.read_records('loss')):
assert i == int(record.decode())
storage_reader.close('loss')
storage_reader.open('accuracy')
assert storage_reader.get_records_num('accuracy') == len
for i, record in enumerate(storage_reader.read_records('accuracy')):
assert i + len == int(record.decode())
storage_reader.close('accuracy')
del storage_reader
def get_runs_metric(metrics, tag=None, experiments=None, params=None):
if not metrics:
return []
filtered_runs = get_runs_hashes(tag, experiments, params)
# Get commits data length
max_commit_len = 0
for run in filtered_runs:
branch_path = os.path.join(PROJECT_PATH, run['branch'])
storage_path = get_run_objects_path(branch_path, run['hash'])
records_storage = Storage(storage_path, 'r')
for metric in metrics:
try:
records_storage.open(metric,
uncommitted_bucket_visible=True)
run['num_steps'] = records_storage.get_records_num(metric)
records_storage.close()
except:
run['num_steps'] = 0
if run['num_steps'] > max_commit_len:
max_commit_len = run['num_steps']
# Remove empty runs
filtered_runs = list(filter(lambda r: r['num_steps'] > 0,
filtered_runs))
# Get tags and colors
commit_models = db.session.query(Commit, Tag) \
.join(Tag, Commit.tags) \
.filter(Commit.hash.in_(map(lambda r: r['hash'], filtered_runs))).all()
for i in commit_models:
if len(i) <= 1 or not i[1].color:
continue
commit_model = i[0]
commit_tag = i[1]
for commit in filtered_runs:
if commit['hash'] == commit_model.hash:
commit['tag'] = {
'name': commit_tag.name,
'color': commit_tag.color,
}
return filtered_runs
import os
from aim.sdk.artifacts.proto.base_pb2 import BaseRecord
from aim.sdk.artifacts.proto.metric_pb2 import MetricRecord
from aimrecords import Storage
storage_path = os.path.join(os.getcwd(), '.aim', 'new-data-model', 'index',
'objects')
storage = Storage(storage_path, 'r')
storage.open('loss')
for r in storage.read_records('loss', slice(None, None)):
base_pb = BaseRecord()
base_pb.ParseFromString(r)
metric_pb = MetricRecord()
metric_pb.ParseFromString(base_pb.artifact)
print('loss', base_pb, metric_pb)
storage.open('accuracy')
for r in storage.read_records('accuracy', slice(None, None)):
base_pb = BaseRecord()
base_pb.ParseFromString(r)
metric_pb = MetricRecord()
metric_pb.ParseFromString(base_pb.artifact)
print('accuracy', base_pb, metric_pb)
storage.close()
import os
from aimrecords import Storage
storage_path = os.getcwd()
# Append records
writer_storage = Storage(storage_path, 'w')
writer_storage.open('loss')
for step in range(100):
writer_storage.append_record('loss',
str(step).encode(),
indexing={'subset': 'train'})
if step % 4 == 0:
writer_storage.append_record('loss',
str(step).encode(),
indexing={'subset': 'val'})
writer_storage.close()
# Select records
reader_storage = Storage(storage_path, 'r')
reader_storage.open('loss')
for r in reader_storage.read_records('loss', slice(0, 20)):
print(r)
print('-' * 25)
def get(self, experiment_name, commit_id):
project = Project()
if not project.exists():
return make_response(jsonify({}), 404)
dir_path = os.path.join('/store', experiment_name)
# Check if experiment exists
if not os.path.isdir(dir_path):
return jsonify({
'init': True,
'branch_init': False,
})
# Get commits
commits = get_branch_commits(dir_path)
# Get specified commit
commit = None
if commit_id == 'latest':
for commit_item, config in commits.items():
if commit is None or config['date'] > commit['date']:
commit = config
elif commit_id == 'index':
commit = {
'hash': 'index',
'date': time.time(),
'index': True,
}
else:
commit = commits.get(commit_id)
if not commit:
return make_response(jsonify({}), 404)
objects_dir_path = os.path.join(dir_path, commit['hash'], 'objects')
meta_file_path = os.path.join(objects_dir_path, 'meta.json')
# Read meta file content
try:
with open(meta_file_path, 'r+') as meta_file:
meta_file_content = json.loads(meta_file.read())
except:
meta_file_content = {}
if commit['hash'] == 'index' and len(meta_file_content) == 0:
return jsonify({
'init': True,
'branch_init': True,
'index_empty': True,
'commit': commit,
'commits': commits,
})
# Get all artifacts(objects) listed in the meta file
metric_objects = []
model_objects = []
dir_objects = []
map_objects = []
stats_objects = []
records_storage = Storage(objects_dir_path, 'r')
# Limit distributions
for obj_key, obj in meta_file_content.items():
if obj['type'] == 'dir':
dir_objects.append({
'name': obj['name'],
'cat': obj['cat'],
'data': obj['data'],
'data_path': obj['data_path'],
})
elif obj['type'] == 'models':
model_file_path = os.path.join(objects_dir_path, 'models',
'{}.aim'.format(obj['name']))
model_file_size = os.stat(model_file_path).st_size
model_objects.append({
'name': obj['name'],
'data': obj['data'],
'size': model_file_size,
})
elif (obj['type'] == 'metrics' and obj['data_path'] != '__AIMRECORDS__') or \
obj['type'] == 'map':
# obj['type'] == 'distribution':
# Get object's data file path
obj_data_file_path = os.path.join(objects_dir_path,
obj['data_path'], obj_key)
# Incompatible version
if obj_key.endswith('.json'):
return make_response(jsonify({}), 501)
if obj['type'] == 'metrics':
comp_content = []
if obj['data_path'] == '__AIMRECORDS__':
format = 'aimrecords'
records_storage.open(obj['name'],
uncommitted_bucket_visible=True)
for r in records_storage.read_records(
obj['name'], slice(-1000, None)):
base, metric_record = Metric.deserialize(r)
comp_content.append(metric_record.value)
records_storage.close(obj['name'])
else:
format = 'json_log'
obj_data_content = read_artifact_log(
obj_data_file_path, 1000)
comp_content = list(
map(lambda x: float(x), obj_data_content))
metric_objects.append({
'name': obj['name'],
'mode': 'plot',
'data': comp_content,
'format': format,
})
elif obj['type'] == 'map':
try:
params_str = read_artifact_log(obj_data_file_path, 1)
if params_str:
map_objects.append({
'name': obj['name'],
'data': json.loads(params_str[0]),
})
except:
pass
records_storage.close()
# Return found objects
return jsonify({
'init': True,
'branch_init': True,
'commit': commit,
'commits': commits,
'metrics': metric_objects,
'models': model_objects,
'dirs': dir_objects,
'maps': map_objects,
'stats': stats_objects,
})
import os
import time
from aimrecords import Storage
storage_path = os.getcwd()
# Select records
reader_storage = Storage(storage_path, 'r')
cursor = None
while True:
reader_storage.open('loss', uncommitted_bucket_visible=True)
for r in reader_storage.read_records('loss', slice(cursor, None)):
print(r)
cursor = int(r.decode()) + 1
reader_storage.close('loss')
time.sleep(0.01)
def get_commits(metric, tag=None, experiments=None):
project_path = '/store'
project_branches = get_project_branches(project_path)
commit_storage_path = lambda b, c: os.path.join(b, c, 'objects')
# Filter by experiments
if experiments and isinstance(experiments, str):
experiments = filter(lambda e: e,
map(lambda e: e.strip(), experiments.split(',')))
project_branches = [e for e in experiments if e in project_branches]
# Get all commit objects
commit_objects = {}
for branch in project_branches:
branch_path = os.path.join(project_path, branch)
branch_commits = get_branch_commits(branch_path)
for c in branch_commits.values():
commit_objects[c['hash']] = {
'branch': branch,
'hash': c['hash'],
'date': c['date'],
'msg': c['message'],
}
# Filter by tag
commit_hashes_by_tag = set()
if tag is not None:
tags = Tag.query.filter(Tag.name.like('{}%'.format(tag))).all()
for t in tags:
for tag_commit in t.commits:
commit_hashes_by_tag.add(tag_commit.hash)
filtered_commits = {
c_hash: commit_objects[c_hash]
for c_hash in commit_hashes_by_tag
}
else:
filtered_commits = commit_objects
# Get commits data length
max_commit_len = 0
for commit_hash, commit in filtered_commits.items():
branch_path = os.path.join(project_path, commit['branch'])
storage_path = commit_storage_path(branch_path, commit['hash'])
records_storage = Storage(storage_path, 'r')
try:
records_storage.open(metric, uncommitted_bucket_visible=True)
commit['num_steps'] = records_storage.get_records_num(metric)
records_storage.close()
except:
commit['num_steps'] = 0
if commit['num_steps'] > max_commit_len:
max_commit_len = commit['num_steps']
# Get commits data
scaled_steps_len = 50
if scaled_steps_len > max_commit_len:
scaled_steps_len = max_commit_len
if scaled_steps_len:
scaled_steps = slice(0, max_commit_len,
max_commit_len // scaled_steps_len)
else:
scaled_steps = slice(0, 0)
# Retrieve actual values from commits
for commit_hash, commit in filtered_commits.items():
branch_path = os.path.join(project_path, commit['branch'])
storage_path = commit_storage_path(branch_path, commit['hash'])
commit['data'] = []
records_storage = Storage(storage_path, 'r')
try:
records_storage.open(metric, uncommitted_bucket_visible=True)
for r in records_storage.read_records(metric, scaled_steps):
base, metric_record = Metric.deserialize(r)
commit['data'].append({
'value': metric_record.value,
'epoch': base.epoch,
'step': base.step,
})
records_storage.close()
except:
pass
# Remove empty commits
filtered_commits = {
c_hash: filtered_commits[c_hash]
for c_hash in filtered_commits.keys()
if len(filtered_commits[c_hash]['data']) > 0
}
# Get tags and colors
commit_models = db.session.query(Commit, Tag) \
.join(Tag, Commit.tags) \
.filter(Commit.hash.in_(filtered_commits.keys())).all()
for i in commit_models:
if len(i) <= 1 or not i[1].color:
continue
commit_model = i[0]
commit_tag = i[1]
for commit_hash, commit in filtered_commits.items():
if commit_hash == commit_model.hash:
commit['color'] = commit_tag.color
commit['tag'] = commit_tag.name
return filtered_commits