Python amap_parser Examples

Example #1

def cellfinder_parser():
    parser = ArgumentParser(formatter_class=ArgumentDefaultsHelpFormatter)
    parser = main_parse(parser)
    parser = registration_parse(parser)
    parser = atlas_parse(parser)
    parser = pixel_parser(parser)
    parser = geometry_parser(parser)
    parser = cellfinder_opt_parse(parser)
    parser = io_parse(parser)
    parser = cell_detect_parse(parser)
    parser = classification_parse(parser)
    parser = cube_extract_parse(parser)
    parser = count_summary_parse(parser)
    parser = figures_parse(parser)
    parser = amap_vis_parser(parser)
    parser = standard_space_parse(parser)
    parser = misc_parse(parser)
    parser = amap_parser(parser)
    parser = model_parser(parser)
    parser = download_directory_parser(parser)
    return parser

Example #2

File: cli.py Project: Jun-Lizst/cellfinder-1

def download_parser():
    parser = ArgumentParser(formatter_class=ArgumentDefaultsHelpFormatter)
    parser = amap_parser(parser)
    parser = model_parser(parser)
    parser = download_directory_parser(parser)
    return parser