def _set_gamma_from_file(br, filename=None):
sigmas = br.get_sigmas()
mesh = br.get_mesh_numbers()
mesh_divisors = br.get_mesh_divisors()
grid_points = br.get_grid_points()
temperatures = br.get_temperatures()
num_band = br.get_frequencies().shape[1]
gamma = np.zeros((len(sigmas),
len(temperatures),
len(grid_points),
num_band), dtype='double')
gamma_iso = np.zeros((len(sigmas),
len(grid_points),
num_band), dtype='double')
ave_pp = np.zeros((len(grid_points), num_band), dtype='double')
is_isotope = False
for j, sigma in enumerate(sigmas):
collisions = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
sigma=sigma,
filename=filename)
if collisions is False:
for i, gp in enumerate(grid_points):
collisions_gp = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
grid_point=gp,
sigma=sigma,
filename=filename)
if collisions_gp is False:
print "Gamma at grid point %d doesn't exist." % gp
return False
else:
gamma_gp, gamma_iso_gp, ave_pp_gp = collisions_gp
gamma[j, :, i] = gamma_gp
if gamma_iso_gp is not None:
is_isotope = True
gamma_iso[j, i] = gamma_iso_gp
if ave_pp_gp is not None:
ave_pp[i] = ave_pp_gp
else:
gamma_at_sigma, gamma_iso_at_sigma, ave_pp = collisions
gamma[j] = gamma_at_sigma
if gamma_iso_at_sigma is not None:
is_isotope = True
gamma_iso[j] = gamma_iso_at_sigma
br.set_gamma(gamma)
if ave_pp is not None:
br.set_averaged_pp_interaction(ave_pp)
return True
def _set_gamma_from_file(br, filename=None):
sigmas = br.get_sigmas()
mesh = br.get_mesh_numbers()
mesh_divisors = br.get_mesh_divisors()
grid_points = br.get_grid_points()
temperatures = br.get_temperatures()
num_band = br.get_frequencies().shape[1]
gamma = np.zeros(
(len(sigmas), len(temperatures), len(grid_points), num_band),
dtype='double')
gamma_iso = np.zeros((len(sigmas), len(grid_points), num_band),
dtype='double')
is_isotope = False
for j, sigma in enumerate(sigmas):
collisions = read_gamma_from_hdf5(mesh,
mesh_divisors=mesh_divisors,
sigma=sigma,
filename=filename)
if collisions is False:
for i, gp in enumerate(grid_points):
collisions_gp = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
grid_point=gp,
sigma=sigma,
filename=filename)
if collisions_gp is False:
print "Gamma at grid point %d doesn't exist." % gp
return False
else:
gamma_gp, gamma_iso_gp = collisions_gp
gamma[j, :, i] = gamma_gp
if gamma_iso_gp is not None:
is_isotope = True
gamma_iso[j, i] = gamma_iso_gp
else:
gamma_at_sigma, gamma_iso_at_sigma = collisions
gamma[j] = gamma_at_sigma
if gamma_iso_at_sigma is not None:
is_isotope = True
gamma_iso[j] = gamma_iso_at_sigma
br.set_gamma(gamma)
# if is_isotope:
# br.set_gamma_isotope(gamma_iso)
return True
def _set_gamma_from_file(br, filename=None, verbose=True):
sigmas = br.get_sigmas()
mesh = br.get_mesh_numbers()
mesh_divisors = br.get_mesh_divisors()
grid_points = br.get_grid_points()
temperatures = br.get_temperatures()
num_band = br.get_frequencies().shape[1]
gamma = np.zeros(
(len(sigmas), len(temperatures), len(grid_points), num_band),
dtype='double')
gamma_iso = np.zeros((len(sigmas), len(grid_points), num_band),
dtype='double')
ave_pp = np.zeros((len(grid_points), num_band), dtype='double')
is_isotope = False
read_succeeded = True
for j, sigma in enumerate(sigmas):
collisions = read_gamma_from_hdf5(mesh,
mesh_divisors=mesh_divisors,
sigma=sigma,
filename=filename,
verbose=verbose)
if collisions:
gamma_at_sigma, gamma_iso_at_sigma, ave_pp = collisions
gamma[j] = gamma_at_sigma
if gamma_iso_at_sigma is not None:
is_isotope = True
gamma_iso[j] = gamma_iso_at_sigma
else:
for i, gp in enumerate(grid_points):
collisions_gp = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
grid_point=gp,
sigma=sigma,
filename=filename,
verbose=verbose)
if collisions_gp:
gamma_gp, gamma_iso_gp, ave_pp_gp = collisions_gp
gamma[j, :, i] = gamma_gp
if gamma_iso_gp is not None:
is_isotope = True
gamma_iso[j, i] = gamma_iso_gp
if ave_pp_gp is not None:
ave_pp[i] = ave_pp_gp
else:
for bi in range(num_band):
collisions_band = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
grid_point=gp,
band_index=bi,
sigma=sigma,
filename=filename,
verbose=verbose)
if collisions_band:
gamma_bi, gamma_iso_bi, ave_pp_bi = collisions_band
gamma[j, :, i, bi] = gamma_bi
if gamma_iso_bi is not None:
is_isotope = True
gamma_iso[j, i, bi] = gamma_iso_bi
if ave_pp_bi is not None:
ave_pp[i, bi] = ave_pp_bi
else:
read_succeeded = False
if read_succeeded:
br.set_gamma(gamma)
if ave_pp is not None:
br.set_averaged_pp_interaction(ave_pp)
return True
else:
return False
def _set_gamma_from_file(br, filename=None, verbose=True):
sigmas = br.get_sigmas()
mesh = br.get_mesh_numbers()
mesh_divisors = br.get_mesh_divisors()
grid_points = br.get_grid_points()
temperatures = br.get_temperatures()
num_band = br.get_frequencies().shape[1]
gamma = np.zeros((len(sigmas),
len(temperatures),
len(grid_points),
num_band), dtype='double')
gamma_iso = np.zeros((len(sigmas),
len(grid_points),
num_band), dtype='double')
ave_pp = np.zeros((len(grid_points), num_band), dtype='double')
is_isotope = False
read_succeeded = True
for j, sigma in enumerate(sigmas):
collisions = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
sigma=sigma,
filename=filename,
verbose=verbose)
if collisions:
gamma_at_sigma, gamma_iso_at_sigma, ave_pp = collisions
gamma[j] = gamma_at_sigma
if gamma_iso_at_sigma is not None:
is_isotope = True
gamma_iso[j] = gamma_iso_at_sigma
else:
for i, gp in enumerate(grid_points):
collisions_gp = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
grid_point=gp,
sigma=sigma,
filename=filename,
verbose=verbose)
if collisions_gp:
gamma_gp, gamma_iso_gp, ave_pp_gp = collisions_gp
gamma[j, :, i] = gamma_gp
if gamma_iso_gp is not None:
is_isotope = True
gamma_iso[j, i] = gamma_iso_gp
if ave_pp_gp is not None:
ave_pp[i] = ave_pp_gp
else:
for bi in range(num_band):
collisions_band = read_gamma_from_hdf5(
mesh,
mesh_divisors=mesh_divisors,
grid_point=gp,
band_index=bi,
sigma=sigma,
filename=filename,
verbose=verbose)
if collisions_band:
gamma_bi, gamma_iso_bi, ave_pp_bi = collisions_band
gamma[j, :, i, bi] = gamma_bi
if gamma_iso_bi is not None:
is_isotope = True
gamma_iso[j, i, bi] = gamma_iso_bi
if ave_pp_bi is not None:
ave_pp[i, bi] = ave_pp_bi
else:
read_succeeded = False
if read_succeeded:
br.set_gamma(gamma)
if ave_pp is not None:
br.set_averaged_pp_interaction(ave_pp)
return True
else:
return False