def test_round_trip_annotations():
a = Annotations(foo=1234, zoo=[123.1, 456.2, 789.3], species='Moose', birthdays=[datetime(1969,4,28), datetime(1973,12,8), datetime(2008,1,3)])
sa = a.toSynapseAnnotations()
# print sa
a2 = Annotations.fromSynapseAnnotations(sa)
# print a2
a = a2
def _getAnnotations(self, entity):
entity_id = entity['id'] if 'id' in entity else str(entity)
url = '%s/entity/%s/annotations' % (self.repoEndpoint, entity_id,)
response = requests.get(url, headers=self.headers)
response.raise_for_status()
return Annotations.fromSynapseAnnotations(response.json())
def test_mixed_annotations():
"""test that toSynapseAnnotations will coerce a list of mixed types to strings"""
a = Annotations(foo=[1, 'a', datetime(1969,4,28,11,47)])
sa = a.toSynapseAnnotations()
# print sa
a2 = Annotations.fromSynapseAnnotations(sa)
# print a2
assert a2['foo'][0] == '1'
assert a2['foo'][1] == 'a'
assert a2['foo'][2].find('1969') > -1
def _setAnnotations(self, entity, annotations):
entity_id = entity['id'] if 'id' in entity else str(entity)
url = '%s/entity/%s/annotations' % (self.repoEndpoint, entity_id,)
a = annotations.toSynapseAnnotations()
a['id'] = entity_id
if 'etag' in entity and 'etag' not in a:
a['etag'] = entity['etag']
response = requests.put(url, data=json.dumps(a), headers=self.headers)
response.raise_for_status()
return Annotations.fromSynapseAnnotations(response.json())