def get_metadata(self, nid: str=None, relation: str=None,
nid_is_source: bool=True):
"""
:param nid: node id
:param relation: the relation to search for
:param nid_is_source: true iff nid is the source of the relation
:return: metadata that reference the nid with the given relation, or
all metadata if fields are empty
"""
match_source_id = {"term": {"source": nid}}
match_target_id = {"nested": {"path": "target", "query": {
"bool": {"should": [{"term": {"target.id": nid}}]}
}}}
if nid is None:
body = {"query": {"match_all": {}}}
elif relation is None:
body = {"query": {"bool": {"should": [
match_source_id, match_target_id
]}}}
else:
match_id = match_source_id if nid_is_source else match_target_id
body = {"query": {"bool": {"must": [
match_id,
{"nested": {"path": "target", "query": {
"bool": {"should": [{"term": {"target.type": relation}}]}
}}}
]}}}
res = client.search(index='metadata', doc_type="annotation", body=body,
scroll="10m", filter_path=[
'hits.hits._id',
'hits.total',
'hits.hits._source.author',
'hits.hits._source.class',
'hits.hits._source.source',
'hits.hits._source.target',
'hits.hits._source.text'])
if res["hits"]["total"] == 0:
return
md_hits = []
for md in res["hits"]["hits"]:
md_hit = MDHit(md["_id"],
md["_source"]["author"],
md["_source"]["class"],
md["_source"]["text"],
md["_source"]["source"],
md["_source"]["target"]["id"],
md["_source"]["target"]["type"])
md_hits.append(md_hit)
yield md_hit
for hit in md_hits:
for comment in self.get_comments(hit.id):
yield comment
def search_keywords_md(self, keywords: list, max_hits=15):
"""
Performs a search query on metadata to match the provided keywords
:param keywords: the list of keywords to match
:param max_hits: max number of results to return
:return: the metadata that contain the keywords
"""
index = "metadata"
body = {
"from": 0,
"size": max_hits,
"query": {
"bool": {
"should": [{
"match": {
"text": keywords
}
}, {
"nested": {
"path": "tags",
"query": {
"bool": {
"should": [{
"match": {
"tags.tag": keywords
}
}]
}
}
}
}]
}
}
}
filter_path = [
'hits.total', 'hits.hits._type', 'hits.hits._id',
'hits.hits._parent', 'hits.hits._source.author',
'hits.hits._source.class', 'hits.hits._source.source',
'hits.hits._source.target', 'hits.hits._source.text'
]
res = client.search(index=index, body=body, filter_path=filter_path)
if res['hits']['total'] == 0:
return []
for el in res['hits']['hits']:
if el["_type"] == "comment":
yield MDComment(el["_id"], el["_source"]["author"],
el["_source"]["text"], el["_parent"])
elif el["_type"] == "annotation":
yield MDHit(el["_id"], el["_source"]["author"],
el["_source"]["class"], el["_source"]["text"],
el["_source"]["source"],
el["_source"]["target"]["id"],
el["_source"]["target"]["type"])
def add_annotation(self,
author: str,
text: str,
md_class: str,
source: str,
target={
"id": None,
"type": None
},
tags=[]):
"""
Adds annotation document to the elasticsearch graph.
:param author: user or process who wrote the metadata
:param text: free text annotation
:param md_class: metadata class
:param source: nid of column source
:param target: (optional) {
"id": nid of column target,
"type": metadata relation
}
:param tags: (optional) keyword tags
:return: an MDHit of the new annotation
"""
timestamp = self._current_time()
mapped_tags = []
for tag in tags:
mapped_tags.append({
"author": author,
"creation_date": timestamp,
"tag": tag
})
body = {
"author": author,
"text": text,
"class": md_class,
"source": source,
"target": target,
"tags": mapped_tags,
"creation_date": timestamp,
"updated_date": timestamp
}
res = client.create(index='metadata', doc_type='annotation', body=body)
hit = MDHit(res["_id"], author, md_class, text, source, target["id"],
target["type"])
return hit
def add_tags(self, author: str, tags: list, md_id: str):
"""
Add tags to the annotation with the given md_id.
:param author: identifiable name of user or process
:param tags: list of tags
:param md_id: metadata id
:return: an MDHit of the updated annotation
"""
timestamp = self._current_time()
res = client.search(index='metadata',
doc_type='annotation',
body={"query": {
"terms": {
"_id": [md_id]
}
}})
if res["hits"]["total"] == 0:
raise ValueError("Given md_id does not exist.")
source = res["hits"]["hits"][0]["_source"]
new_tags = []
for tag in tags:
new_tags.append({
"author": author,
"creation_date": timestamp,
"tag": tag
})
new_tags.extend(source["tags"])
body = {"doc": {"updated_date": timestamp, "tags": new_tags}}
res = client.update(index='metadata',
doc_type='annotation',
id=md_id,
body=body)
return MDHit(res["_id"], author, source["class"], source["text"],
source["source"], source["target"]["id"],
source["target"]["type"])
