def bwt_run(self, args):
obj = BWT(
args.aligner,
args.include_wildcard,
args.include_baits,
args.read_one,
args.read_two,
args.threads,
args.output_file,
args.debug,
args.clean,
args.local_database,
args.mapq,
args.mapped,
args.coverage
)
obj.run()
def bwt_run(self, args):
obj = BWT(args.aligner, args.include_wildcard, args.read_one,
args.read_two, args.threads, args.output_file, args.debug,
args.local_database)
obj.run()