Example #1
0
 def handle_abort_element(self, req_post):
     session = self.session
     claim_id = req_post['claim']
     assert claim_id == self.ref_id, "claim_id {0}, ref_id {1}".format(claim_id, self.ref_id)
     claim = session.query(Claim).filter_by(ref_id=claim_id).one()
     self.set_claim_form(claim)
     parts, part_links, _ = get_participants(session, claim_id)
     participant_id = req_post['participant']
     participant = session.query(Participant).filter_by(ref_id=participant_id).first()
     pform = ParticipantEdit(req_post)
     self.participant_form = self.finish_participant_form(pform, parts)
     element_id = req_post['element']
     if element_id == NOELEMENT:
         head_element = get_head_element(session, participant)
         if head_element:
             self.set_element_form(head_element,
                                   element_choices(session, participant))
             self.set_hidden_fields(claim_id, participant_id, str(head_element.element_id))
         else:
             self.set_hidden_fields(claim_id, participant_id, NOELEMENT)
     else:
         element = session.query(ParticipantElement).filter_by(element_id=element_id).one()
         self.set_element_form(element,
                               element_choices(session, participant))
         self.set_hidden_fields(claim_id, participant_id, element_id)
Example #2
0
 def handle_update_participant(self, req_post):
     logging.info("Hit 'update_participant'")
     claim_id = req_post['claim']
     assert claim_id == self.ref_id, "claim_id {0}, ref_id {1}".format(claim_id, self.ref_id)
     session = self.session
     claim = session.query(Claim).filter_by(ref_id=claim_id).one()
     self.set_claim_form(claim)
     participant_id = req_post['participant_choice']
     participant = get_participant(session, participant_id)
     parts, part_links, _ = get_participants(session, claim_id)
     form = ParticipantEdit(req_post)
     form.ref_id = participant_id
     form = self.finish_participant_form(form, parts)
     form.validate()
     if form.errors:
         active_element = get_head_element(session, participant)
         self.choose_element_form(req_post,
                                  active_element,
                                  element_choices(session, participant))
     else:
         logging.info("participant_choice: {0}".format(participant_id))
         participant.type = form.type.data
         participant.label = form.label.data
         participant.publication_taxon = form.publication_taxon.data
         participant.publication_anatomy = form.publication_anatomy.data
         participant.publication_substrate = form.publication_substrate.data
         participant.publication_text = form.publication_text.data
         participant.participation_property = expand_curie(form.participation_property.data)
     self.participant_form = form
     element_id = req_post['element']
     element = get_pelement(session, element_id)
     self.set_element_form(element, element_choices(session, participant))
     self.update_graph(claim, parts, part_links)
     self.set_hidden_fields(claim_id, participant_id, element_id)
Example #3
0
 def handle_choose_participant(self, req_post):
     claim_id = req_post['claim']
     assert claim_id == self.ref_id, "claim_id {0}, ref_id {1}".format(claim_id, self.ref_id)
     session = self.session
     claim = session.query(Claim).filter_by(ref_id=claim_id).first()
     participant_id = req_post['participant_choice'] # not participant
     participant = get_participant(session, participant_id)
     head_element = get_head_element(session, participant)
     parts, part_links, active = get_participants(self.session, claim_id)
     self.set_claim_form(claim)
     self.choose_participant_form(participant, req_post, parts)
     if head_element:
         self.set_element_form(head_element,
                               element_choices(self.session, participant))
         element_id = str(head_element.element_id)
     else:
         self.element_form = ElementCreateOnly(None)
         self.element_form.expression_type.data = "None"
         self.element_form.expression_type.choices = expression_type_choice(session)
         element_id = NOELEMENT
     self.update_graph(claim, parts, part_links)
     self.set_hidden_fields(claim_id, participant_id, element_id)
Example #4
0
 def handle_abort_participant(self, req_post):
     session = self.session
     claim_id = req_post['claim']
     assert claim_id == self.ref_id, "claim_id {0}, ref_id {1}".format(claim_id, self.ref_id)
     claim = self.session.query(Claim).filter_by(ref_id=claim_id).one()
     self.set_claim_form(claim)
     parts, part_links, _ = get_participants(session, claim_id)
     participant_id = req_post['participant']
     participant = self.session.query(Participant).filter_by(ref_id=participant_id).first()
     form = ParticipantEdit(req_post)
     form.ref_id = participant_id
     self.participant_form = self.finish_participant_form(form, parts)
     if participant:
         head_element = get_head_element(session, participant)
         self.set_element_form(head_element,
                               element_choices(session, participant))
         if head_element:
             self.set_hidden_fields(claim_id, participant_id, head_element.id)
         else:
             self.set_hidden_fields(claim_id, participant_id, NOELEMENT)
     else:
         self.element_form = InactiveElementEdit()
         self.set_hidden_fields(claim_id, NOPARTICIPANT, NOELEMENT)
Example #5
0
 def handle_form_g_e_t_request(self):
     ref_id = self.ref_id
     logging.info("GET request")
     if ref_id:
         claim = self.session.query(Claim).filter_by(ref_id=ref_id).one()
         self.set_claim_form(claim)
         parts, part_links, active = get_participants(self.session, ref_id)
         if parts:
             active_element = get_head_element(self.session, active)
             self.set_participant_form(active, parts)
             if active_element:
                 choices = element_choices(self.session, active)
                 self.set_element_form(active_element, choices)
                 self.set_hidden_fields(claim.ref_id, active.ref_id, str(active_element.element_id))
             else:
                 self.element_form = InactiveElementEdit(None)
                 self.set_hidden_fields(claim.ref_id, active.ref_id, NOELEMENT)
             if part_links:
                 self.update_graph(claim, parts, part_links)
         else:
             form = ParticipantCreate(None)
             form.ref_id = 'UNASSIGNED'
             if active:
                 form.type.data = active.type
             else:
                 form.type.data = 'UNASSIGNED'  # should guess from claim
             self.participant_form = self.finish_participant_form(form, parts)  # ?
             self.element_form = InactiveElementEdit(None)
             self.set_hidden_fields(claim.ref_id, NOPARTICIPANT, NOELEMENT)
     else:  # GET for claim edit w/o ref_id means create a new claim
         self.claim_form = ClaimCreate(None)
         self.set_claim_form_choices(self.claim_form)
         inactive_participant_form = InactiveParticipantEdit(None)
         inactive_element_form = InactiveElementEdit(None)
         self.participant_form = inactive_participant_form
         self.element_form = inactive_element_form
         self.set_hidden_fields(NOCLAIM, NOPARTICIPANT, NOELEMENT)